Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400
| | | | | | | | | | | | | | | | | | | | |
| SS Seq | CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCSSSSSSSSCCCCCCCCSSSSSSCCSSSSSSCCHHHHHHHHHHCCCHHHCCSSSSSCCCHHHCCCCHHHHHHHHHCCCCCSSSSCCCCHHHHHHHHHHHCCCCCCCSSSSSSCCCCSSSCCCSSSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSSCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHCCCSSSSCCSSSCHHHSCCCCCCCCSSSSSSCCCHHHHHHHHHHHHHHHHHCCCCCCCSSSSSSCCCCCCCCHHHHHHHHHHCCCCSSSSSCCCCCCCCCCCCCCCCCHHHCHHHHHHCCCCCCCCCCCCC MWALCSLLRSAAGRTMSQGRTISQAPARRERPRKDPLRHLRTREKRGPSGCSGGPNTVYLQVVAAGSRDSGAALYVFSEFNRYLFNCGEGVQRLMQEHKLKVARLDNIFLTRMHWSNVGGLSGMILTLKETGLPKCVLSGPPQLEKYLEAIKIFSGPLKGIELAVRPHSAPEYEDETMTVYQIPIHSEQRRGKHQPWQSPERPLSRLSPERSSDSESNENEPHLPHGVSQRRGVRDSSLVVAFICKLHLKRGNFLVLKAKEMGLPVGTAAIAPIIAAVKDGKSITHEGREILAEELCTPPDPGAAFVVVECPDESFIQPICENATFQRYQGKADAPVALVVHMAPASVLVDSRYQQWMERFGPDTQHLVLNENCAFRCKKEGPTLSVPMVQGECLLKYQLRPRREWQRDA |
1 | 2cbnA | 0.17 | 0.11 | 3.63 | 1.00 | DEthreader | | --------------------------------------------------------AMNLIFLGTSAVPNVTAILLNLQSGLWLFDCGEGTQHQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIPLTIYGPQGIREFVETALRISGSWTDYPLEIVEIGAEILDDGLRKVTAYPLEH-------------------------------------------------PLECYGYRIEEHDAPGALNAQALKAAGVPPG-PLFQELK-A----GKTITLRQINGA-DYLAAPVPGKALAIFGDTGP-C--DAA-L--DL-AK-----GVDMVHEATLDISTRQ-AAT-LAREAG--VGKLIITHVSCQHLLRECRSIFPATELANDFTVFNV---------- |
2 | 2fk6A | 0.19 | 0.13 | 4.24 | 1.76 | SPARKS-K | | ---------------------------------------------------------MELLFLGTGAGRNVTSVALKLLRSVWLFDCGEATQHQMLHTTIKPRKIEKIFITHMAGDHVYGLPGLLGSRSFQGGDELTVYGPKGIKAFIETSLAVTKTHLTYPLAIQEIEEGIFEDDQFIVTAVSVIHGVE-------------------------------------------------AFGYRVQEKDVPGSLKADVLKEMNIPPGP-----VYQKIKKGETVTLDGRIINGNDFLEPPKKGRSVVFSDTVSDKLKELMVHEATF---AKEDRKLAYDYYHSTTEQAAVTAKEAR--------AKQLILTHISA-RYQGDVDVFP-NSVAAYDFLEVNVPRG------- |
3 | 2fk6A | 0.18 | 0.12 | 4.04 | 0.95 | MapAlign | | ---------------------------------------------------------MELLFLGTGAGRNVTSVALKERRSVWLFDCGEATQHQMLHTTIKPRKIEKIFITHMAGDHVYGLPGLLGSRSFQGGDELTVYGPKGIKAFIETSLAVTKTHLTYPLAIQEIEEGIVFEDQFIVTAVSVIH-------------------------------------------------GVEAFGYRVQEKDVPGSLKADVLKEMNIPP-----GPVYQKIKKGETVTLEGRIINGNDFLEPPKKGRSVVFSGDTRV--SDKLKE------LAR----DCDVMVHEATYYHSTTEQAAVTAKEAR--AKQLILTHISASLELQKEAVDVFNSVAAYDFLEVNVPRG------- |
4 | 2fk6A | 0.17 | 0.12 | 3.87 | 0.66 | CEthreader | | ---------------------------------------------------------MELLFLGTGAGRNVTSVALKLRRSVWLFDCGEATQHQMLHTTIKPRKIEKIFITHMAGDHVYGLPGLLGSRSFQGGDELTVYGPKGIKAFIETSLAVTKTHLTYPLAIQEIEGIVFEDDQFIVTAVSVIH-------------------------------------------------GVEAFGYRVQEKDVPGSLKADVLKEMNIPPGP----VYQKIKKGETVTLEDGRIINGNDFLEPPKKGRSVVFSDTRVSDKLKELARDCDVMVHEA----TFAKEDRKLAYDYYHSTTEQAAVTAKEARAKQLILTHISARYQGDASLEVFPNSVAAYDFLEVNVPRG------- |
5 | 2fk6A | 0.18 | 0.12 | 3.98 | 1.24 | MUSTER | | ---------------------------------------------------------MELLFLGTGAGRNVTSVALKLRRSVWLFDCGEATQHQMLHTTIKPRKIEKIFITHMAGDHVYGLPGLLGSRSFQGGDELTVYGPKGIKAFIETSLAVTKTHLTYPLAIQEIEEIVFEDDQFIVTAVSVI-------------------------------------------------HGVEAFGYRVQEKDVPGSLKADVLKEMNIPPG-----PVYQKIKKGETVTLDGRIINGNDFLEPPKKGRSVVFSDTRVSDKLKELARDCDV--FAKEDRKLAYDYYHST------TEQAAVTAKEA--RAKQLILTHISARYQGDASLEVFPNSVAAYDFLEVNVPRG------- |
6 | 5mtzA1 | 0.19 | 0.14 | 4.41 | 3.53 | HHsearch | | --------------------------------------------------------FFTFIPITHPTSDTKPLLLVQSHGEKYFFGIGEGSQRSLTENKIRISKLKDIFLTELNWSDIGGLPG-ILTIADQGKSNLVLHYNDILNYIVSTWRYFVF-RFGIDLNDHIKDKEVYKDKIIAVKSFNVLKNGGE-DRLGVFDSFQKRSIVAKFPKHAPTRYDSSD--PHLNVELPDLDKVEVSTNYEISFSPVR---------------------------------------------LENERHFAKVLILDIPDDLYLNAFVEKFK--DYD---CAELG-VYYFLGDEVIND-NLFAFIDIFEKKVNH-ISHNKISFDTGCKSQIEKDNIHIFSQNKTVTFEPFRNEEPKC |
7 | 5mtzA1 | 0.16 | 0.12 | 3.96 | 1.90 | FFAS-3D | | ----------------------------------------------------------TFIPITHPTSDTPLLLVQSAHGEKYFFKIGEGSQRSLTENKIRISKLKDIFLTGLNWSDIGGLPGIL-TIADQGKSNLVLHYGNDILNYIVSTWRYFVFRFGIDLNDHIKDKEVYKDKIIAVKSFNVLKNGGEDRLGVFDSFQKGVLRSIVAKFPK---------------------------------HAPTDRYDPSSDPHLNVE-----LPDLDAKVEVSTNYEI----SFSPVRLENERHFAKVLILDIPDDLYLNAFVEKF------KDYDCAELGVYYFLGDEVTINDNLFAFIDIFEKNNYGKISHNKISPRVPLNTIIEKDNIHIFSQNKTVTFEPFRNEEPK- |
8 | 2fk6A | 0.16 | 0.11 | 3.64 | 1.02 | EigenThreader | | --------------------------------------------------------MELLFLGTGAGIRNVTSVALKLLRSVWLFDCGEATQHQMLHTTIKPRKIEKIFITHMAGDHVYGLPGLLGSRSFQGGDELTVYPKG-IKAFIETSLAVTKTHLTYPLAIQEIEED-----QFIVTAVSVI-------------------------------------------------HGVEAFGYRVQEKDVPGSLKADVLK--EMNIP---PGPVYQKIKKGETVTLEDRIINGNDFLEPPKKGRSVVFSGDTRVSDKLKELA-----------RDCDVMVHEATFAAYDYYTEQAAVTAKEARAKQLILTHISARYQGDKEAVDVFPNSVAAYDFLEVN-VPRG------ |
9 | 2fk6A | 0.20 | 0.13 | 4.22 | 2.29 | CNFpred | | ---------------------------------------------------------MELLFLGTGAGINVTSVALKLLRSVWLFDCGEATQHQMLHTTIKPRKIEKIFITHMAGDHVYGLPGLLGSRSFQGEDELTVYGPKGIKAFIETSLAVTKTHLTYPLAIQEIEGIVFEDDQFIVTAVSVIHG-------------------------------------------------VEAFGYRVQEKDVPGSLKADVLKEMNIPPG-----PVYQKIKKGETVTLEGRIINGNDFLEPPKKGRSVVFSGDTVSDKLKELARD-------------CDVMVHEATFA-STTEQAAVTAKEA--RAKQLILTHISARYQGDASLELFPNSVAAYDFLEVNVP--------- |
10 | 5mtzA | 0.16 | 0.11 | 3.74 | 1.00 | DEthreader | | ------------------------------------------------------F--FTFIPITHPTSDTHPLLLVQSAGEKYFFGKIEGSQRSLTENKIRISKLKDIFLTELNWSDIGGLPG-ILTIADQGKSNLVLHYNDILNYIVSTW-RYFVFRFGIDLNDHIKDKEVYKDKIIAVKSFNVLKNGG-EDRLGVFD-FQKGVLRSIV-KYDPSSDPHLNVELP--D--LDAKV-EVSTNYEISFSPVR--------------------------LE-----------------N--ERHFAKVLILDIDDLNAFVEKFKD--Y--DC----AELGVYYFLGVTINDNLFAFIDIFEKNNYGKVNHISHNKIFSFYDRPLNIIEKNIHIFSQNKTVTFEPKCNINGEA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
|