Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420
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| SS Seq | CCCHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSCCCCCSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCSCCCSSSSSSCCSSCCCCCSSSSCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCSSCCCCCCCCCCCCCCCHHHHHHCCCHHHCCCHHHHHCCCCCCCCSCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCSCCSSSCCCCCCSSSSCCCCCSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MLKVSAVLCVCAAAWCSQSLAAAAAVAAAGGRSDGGNFLDDKQWLTTISQYDKEVGQWNKFRDEVEDDYFRTWSPGKPFDQALDPAKDPCLKMKCSRHKVCIAQDSQTAVCISHRRLTHRMKEAGVDHRQWRGPILSTCKQCPVVYPSPVCGSDGHTYSFQCKLEYQACVLGKQISVKCEGHCPCPSDKPTSTSRNVKRACSDLEFREVANRLRDWFKALHESGSQNKKTKTLLRPERSRFDTSILPICKDSLGWMFNRLDTNYDLLLDQSELRSIYLDKNEQCTKAFFNSCDTYKDSLISNNEWCYCFQRQQDPPCQTELSNIQKRQGVKKLLGQYIPLCDEDGYYKPTQCHGSVGQCWCVDRYGNEVMGSRINGVADCAIDFEISGDFASGDFHEWTDDEDDEDDIMNDEDEIEDDDEDEGDDDDGGDDHDVYI |
1 | 1vt4I3 | 0.06 | 0.06 | 2.51 | 0.70 | CEthreader | | -----------------EYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIE-ENLICSKYTDLLRIALMAEDEAIFEEAHKQVQRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
2 | 6bq1A2 | 0.05 | 0.05 | 2.24 | 0.62 | EigenThreader | | KKDYSNFMASLNLRNRYAGEVYGMIRLHSALDRSHPQHYTQAMFKLTAMLISSKDCDPQLLHHLCWGPLRMFNEHGMETALACWEWLLAGKDGVEVPFMR------------EMAGAWHMTVEQKFGLFSAEIKEADPSLNIGGAKGSMNRHVAAIGPRFKLLTLGLSLLHADVVP----NLSAPELELDQAGYISLSEKQWKDNVNLAWSISPYLAVQLPARFKNTEAIGNEVTRLVRLDPGAVSDVPEAIKFLV--TWHTIDADAPEL-----SHVLCWAPTDPPTGLSYFSSMYPPHPLTAQYGVKVLRSFPPDAILFYLSALSEVKVQPGCYLPSNPEAIVLPYRVVATA-PGCGVIECIPDCTSRDQLQIKDRHNGNI---MLDKKGHIIHIDFGFMFESDIKLTDEMVMIMGGKMEATPFKWFMEMCVRG |
3 | 7kbuA | 0.26 | 0.12 | 3.68 | 1.22 | FFAS-3D | | ---------------------------------------------------------------------------------------DSCMSFQCKRGHICKADQQGKPHCVCQDP----------------------VTCPPTKPLDQVCGTDNQTYASSCHLFATKCRLEGTLQLDYFGACK------------SIPTCTDFEVIQFPLRMRDWLKNILMQLYEANSEVKKIYLDEKRLLAGNYHMYVYPVHWQFSELDQHMDRVLTHSELAPLSLVPMEHCITRFFEECDPNKDKHITLKEWGHCFGIK-----EEDIDENL--------------------------------------------------------------------------------------------------------------- |
4 | 1bmoA | 0.26 | 0.12 | 3.68 | 2.01 | SPARKS-K | | ----------------------------------------------------------------------------------------PCQNHHCKHGKVCELDENNTPMCVCQDP--------------------TSCPAPI-GEFEKVCSNDNKTFDSSCHFFATKCLEGTKLHLDYIGPCKYI------------PPCLDSELTEFPLRMRDWLKNVLVTLERDEDNNLLTHENEKRLEAGDHPVYIFPVHWQFGQLDQHPDGYLSHTELAPLRAIPMEHCTTRFFETCDLDNDKYIALDEWAGCFGIKQKDIDKDLVI------------------------------------------------------------------------------------------------------------------ |
5 | 1nubA | 0.26 | 0.12 | 3.74 | 3.22 | CNFpred | | ---------------------------------------------------------------------------------------APCQNHHCKHGKVCELDENNTPMCVCQD--------------------PTSCPAPIG-EFEKVCSNDNKTFDSSCHFFATKCTLEHKLHLDYIGPCKYIP------------PCLDSELTEFPLRMRDWLKNVLVTLERDEDNNLLTEKQKLRVKKI-YNMYIFPVHWQFGQLDQHPDGYLSHTELAPLRAPPMEHCTTRFFETCDLDNDKYIALDEWAGCFGIKQ--------KDIDKDLVI---------------------------------------------------------------------------------------------------------- |
6 | 3qmzA | 0.06 | 0.04 | 1.73 | 0.67 | DEthreader | | -------------------------------VSLEAIVIPTIDTIHEKFYLLNSKRGGSKTMINNSLYDVVGI--SKDTTEHILSALHRH-------------FFWK---------------TGLQHYLFSPELTERIFAVKEKNSFEQLYETVDKYL-NQDLGNISSNKTDL--LRR------INWMTKTSQNEVERAVKVTAKYQDLQENQRFVNVGLEK-LNE--S---V-------SLVSLTEKRWL--------------------------T---LNEYRLKLKNLEK--L-LDEMVTLNNKKEMNEKKLSESEEFFPQFDNLVE-----SIIGKHSVKIFSMSCKRVFIKTAART-----R-V------DEILWLLYQEVKNWNIADVTGTFKLI-EGTVKDFALITARKLAHCDNLQI-G-------- |
7 | 1vt4I3 | 0.07 | 0.07 | 2.86 | 1.18 | MapAlign | | -NDPKYERLVNAILDFLAIFEEAHKQVQGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
8 | 1bmoA | 0.27 | 0.13 | 3.87 | 1.01 | MUSTER | | ----------------------------------------------------------------------------------------PCQNHHCKHGKVCELDENNTPMCVC--------------------QDPTSCPA-PIGEFEKVCSNDNKTFDSSCHFFATKCTLEGTLHLDYIGPCKYIP------------PCLDSELTEFPLRMRDWLKNVLVTLYERDEDNNLLTENEKRLEAGDHPVYIFPVHWQFGQLDQHIDGYLSHTELAPLPLIPMEHCTTRFFETCDLDNDKYIALDEWAGCFGIKQKDIDKDLVI------------------------------------------------------------------------------------------------------------------ |
9 | 1bmoA | 0.29 | 0.13 | 4.05 | 3.70 | HHsearch | | ----------------------------------------------------------------------------------------PCQNHHCKHGKVCELDENNTPMCVCQDP--------------------TSCPA-PIGEFEKVCSNDNKTFDSSCHFFATKCTLGHKLHLDYIGPCKY------------IPPCLDSELTEFPLRMRDWLKNVLERDEDNNLLTEKQKLERLEAGDHNYNMYIFPVHWQFGQLDQHIDGYLSHTELAPLRLIPMEHCTTRFFETCDLDNDKYIALDEWAGCFGIKQKDI-------------DKDLV--I--------------------------------------------------------------------------------------------------- |
10 | 1bmoA | 0.27 | 0.12 | 3.81 | 0.69 | CEthreader | | ----------------------------------------------------------------------------------------PCQNHHCKHGKVCELDENNTPMCVCQ---------------------DPTSCPAPIGEFEKVCSNDNKTFDSSCHFFATKCTLGHKLHLDYIGPCKY------------IPPCLDSELTEFPLRMRDWLKNVLVTIHENEKRLEAGDHPVELLARDFEKNYIFPVHWQFGQLDQHIDGYLSHTELAPLRLIPMEHCTTRFFETCDLDNDKYIALDEWAGCFGIKQKDIDKDLVI------------------------------------------------------------------------------------------------------------------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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