Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360
| | | | | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCSSSSSSCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCSSSSSSSSSSCCSSSSSSSSSCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCSSSSSSSSCCCCCCCCHHHHHHHHHHHHCCCSSSSSSSCCCCCHHHHHHHHHHHHHHHHHHCCCSSSCCCCCCCCHHHHHHHHHHHHHCCCCSSSCCCCSSCCCCCSSSSCCCCCCCSSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC MSTGLRYKSKLATPEDKQDIDKQYVGFATLPNQVHRKSVKKGFDFTLMVAGESGLGKSTLVHSLFLTDLYKDRKLLSAEERISQTVEILKHTVDIEEKGVKLKLTIVDTPGFGDAVNNTECWKPITDYVDQQFEQYFRDESGLNRKNIQDNRVHCCLYFISPFGHGLRPVDVGFMKALHEKVNIVPLIAKADCLVPSEIRKLKERIREEIDKFGIHVYQFPECDSDEDEDFKQQDRELKESAPFAVIGSNTVVEAKGQRVRGRLYPWGIVEVENQAHCDFVKLRNMLIRTHMHDLKDVTCDVHYENYRAHCIQQMTSKLTQDSRMESPIPILPLPTPDAETEKLIRMKDEELRRMQEMLQRMKQQMQDQ |
1 | 6mq9A | 0.46 | 0.32 | 9.33 | 1.00 | DEthreader | | ------------------------------------------FEFNIMVVGQSGLGKSTMVNTLFKSNPPG------TP--QTL--QLHSLTHVIEEKGVKLKLTVTDTPGFGDQINNDNCWDPILGYINEQYEQYLQEEILIRQRHIPDTRVHCCVYFVPPTGHCLRPLDIEFLQRLCRTVNVVPVIARADSLTMEEREAFRRRIQQNLRTHCIDVYPQMFDEDIN---DKILNSKLRDRIPFAVVGADQEHLVNGRCVLGRKTKWGIIEVENMAHCEFPLLRDLLIRSHLQDLKDITHNIHYENYRVIRLN-------------------------------------------------------- |
2 | 4yqfA | 0.48 | 0.35 | 10.09 | 2.36 | SPARKS-K | | -----------------------------------------GFEFNIMVVGQSGLGKSTLINTLFKSKISRKSVQPTSEERIPKTIEIKSITHDI---GVRMKLTVIDTPGFGDHINNENCWQPIMKFINDQYEKYLQEEVNIRKKRIPDTRVHCCLYFIPATGHSLRPLDIEFMKRLSKVVNIVPVIAKADTLTLEERVHFKQRITADLLSNGIDVYPQKEFD--EDSEDRLVNEKFREMIPFAVVGSDHEYQVNGKRILGRKTKWGTIEVENTTHCEFAYLRDLLIRTHMQNIKDITSSIHFEAYRVKRL--------------------------------------------------------- |
3 | 6mq9A | 0.48 | 0.34 | 9.86 | 0.95 | MapAlign | | ------------------------------------------FEFNIMVVGQSGLGKSTMVNTLFKSKVWKSN-----PPGTPQTLQLHSLTHVIEEKGVKLKLTVTDTPGFGDQINNDNCWDPILGYINEQYEQYLQEEILIRQRHIPDTRVHCCVYFVPPTGHCLRPLDIEFLQRLCRTVNVVPVIARADSLTMEEREAFRRRIQQNLRTHCIDVY-PQMCF-DEDINDKILNSKLRDRIPFAVVGADQEHLVNGRCVLGRKTKWGIIEVENMAHCEFPLLRDLLIRSHLQDLKDITHNIHYENYRVIRL--------------------------------------------------------- |
4 | 6mq9A | 0.47 | 0.34 | 9.86 | 0.95 | CEthreader | | ------------------------------------------FEFNIMVVGQSGLGKSTMVNTLFKSKVWKSNP-----PGTPQTLQLHSLTHVIEEKGVKLKLTVTDTPGFGDQINNDNCWDPILGYINEQYEQYLQEEILITRQHIPDTRVHCCVYFVPPTGHCLRPLDIEFLQRLCRTVNVVPVIARADSLTMEEREAFRRRIQQNLRTHCIDVYPQMCF--DEDINDKILNSKLRDRIPFAVVGADQEHLVNGRCVLGRKTKWGIIEVENMAHCEFPLLRDLLIRSHLQDLKDITHNIHYENYRVIRLN-------------------------------------------------------- |
5 | 4yqfA | 0.48 | 0.35 | 10.09 | 1.99 | MUSTER | | -----------------------------------------GFEFNIMVVGQSGLGKSTLINTLFKSKISRKSVQPTSEERIPKTIEIKSITHDIGVR---MKLTVIDTPGFGDHINNENCWQPIMKFINDQYEKYLQEEVNINRKKIPDTRVHCCLYFIPATGHSLRPLDIEFMKRLSKVVNIVPVIAKADTLTLEERVHFKQRITADLLSNGIDVYPQKEF--DEDSEDRLVNEKFREMIPFAVVGSDHEYQVNGKRILGRKTKWGTIEVENTTHCEFAYLRDLLIRTHMQNIKDITSSIHFEAYRVKRL--------------------------------------------------------- |
6 | 3ftqB | 0.65 | 0.45 | 12.76 | 3.03 | HHsearch | | ----------------------------------------KGFEFTLMVVGESGLGKSTLINSLFLTDLYK----------IERTVQIEASTVEIEERGVKLRLTVVDTPGYGDAINCRDCFKTIISYIDEQFERYLHDESGLNRRHIIDNRVHCCFYFISPFGHGLKPLDVAFMKAIHNKVNIVPVIAKADTLTLKERERLKKRILDEIEEHSIKIYHLPDAED-----FKEQTRLLKASIPFSVVGSNQLIE-----VRGRLYPWGVVEVENPEHNDFLKLRTMLI-THMQDLQEVTQDLHYENFRSERLK-------------------------------------------------------- |
7 | 6mq9A | 0.47 | 0.34 | 9.86 | 2.57 | FFAS-3D | | ------------------------------------------FEFNIMVVGQSGLGKSTMVNTLFKSKVWKSNPPGT-----PQTLQLHSLTHVIEEKGVKLKLTVTDTPGFGDQINNDNCWDPILGYINEQYEQYLQEEILITRQHIPDTRVHCCVYFVPPTGHCLRPLDIEFLQRLCRTVNVVPVIARADSLTMEEREAFRRRIQQNLRTHCIDVYPQMCFD--EDINDKILNSKLRDRIPFAVVGADQEHLVNGRCVLGRKTKWGIIEVENMAHCEFPLLRDLLIRSHLQDLKDITHNIHYENYRVIRLN-------------------------------------------------------- |
8 | 4yqfA | 0.48 | 0.34 | 10.00 | 1.00 | EigenThreader | | -----------------------------------------GFEFNIMVVGQSGLGKSTLINTLFKSKISRKS--VQPEERIPKTIEIKSITHDI---GVRMKLTVIDTPGFGDHINNENCWQPIMKFINDQYEKYLQEEVNINRKKRPDTRVHCCLYFIPATGHSLRPLDIEFMKRLSKVVNIVPVIAKADTLTLEERVHFKQRITADLLSNGIDVYPQKEFDED--SEDRLVNEKFREMIPFAVVGSDHEYQVNGKRILGRKW--GTIEVENTTHCEFAYLRDLLIRTHMQNIKDITSSIHFEAYRVKRL--------------------------------------------------------- |
9 | 6uqqC | 0.50 | 0.38 | 11.00 | 2.35 | CNFpred | | -----------------------------------------GFDFNIMVVGQSGLGKSTLVNTLFKSQVSRKASSWNREEKIPKTVEIKAIGHVIEEGGVKMKLTVIDTPGFGDQINNENCWEPIEKYINEQYEKFLKEEVNIARKRIPDTRVHCCLYFISPTGHSLRPLDLEFMKHLSKVVNIIPVIAKADTMTLEEKSEFKQRVRKELEVNGIEFYPQKEFDE-DLEDKTENDKIRQESMPFAVVGSDKEYQVNGKRVLGRKYPWGIIEVENLNHCEFALLRDFVIRTHLQDLKEVTHNIHYETYRAKRLNDN------------------------------------------------GGLPPV |
10 | 3ftqB | 0.64 | 0.44 | 12.54 | 1.00 | DEthreader | | ----------------------------------------KGFEFTLMVVGESGLGKSTLINSLFLTDL-Y-----KIE--RTV--QIEASTVEIEERGVKLRLTVVDTPGYGDAINCRDCFKTIISYIDEQFERYLHDESGLNRRHIIDNRVHCCFYFISPFGHGLKPLDVAFMKAIHNKVNIVPVIAKADTLTLKERERLKKRILDEIEEHSIKIYHLPDA-----EDFKEQTRLLKASIPFSVVGSNQLIE-----VRGRLYPWGVVEVENPEHNDFLKLRTMLIT-HMQDLQEVTQDLHYENFRSERLK-------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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