Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Download alignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320
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| SS Seq | CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSCCCCSSSCCCCCCCCCCCCCCCCCSSSCCCCCCCSCCHHHCCCCCCCCSSSCCCCCCCCCCCCCCCCCCCCCSSSCCCCCCCCCCCCCCCCCSSSCCCCCCCCCCCCHHHHCCCCCCCSSSCCCCCCCCCCCCCCCCCCSSSCCCCCCCCCCHHHCCCCCCCHHHHHHHCCSSCCCCCCCCCCCHHHHCCCCCCCSCSCC MKTLAGLVLGLVIFDAAVTAPTLESINYDSETYDATLEDLDNLYNYENIPVDKVEIEIATVMPSGNRELLTPPPQPEKAQEEEEEEESTPRLIDGSSPQEPEFTGVLGPHTNEDFPTCLLCTCISTTVYCDDHELDAIPPLPKNTAYFYSRFNRIKKINKNDFASLSDLKRIDLTSNLISEIDEDAFRKLPQLRELVLRDNKIRQLPELPTTLTFIDISNNRLGRKGIKQEAFKDMYDLHHLYLTDNNLDHIPLPLPENLRALHLQNNNILEMHEDTFCNVKNLTYIRKALEDIRLDGNPINLSKTPQAYMCLPRLPVGSLV |
1 | 6wmlA | 0.17 | 0.14 | 4.52 | 1.17 | DEthreader | | -------NAP-----I--ENHFTRPLIKPQCAAYGKA-LD-LSLNSI----------CLNLSNNQEFIPHVKY-----------T-LSDLEVLDLSY-N-SHYFR---VT-----HHLEFIQNFLKVLNLSHNNIYTLYNLESKLVELVFSGNRLDIWYISIFKGLKNLTRLDLSLNRLKHIPNEAFLNPASLTELHINDNMLKFFNWLFPRLELLDLRGNKLL--FLTDS-LDFTSSLRTLLLSHNRISHLPSGFVSSLKHLDLSSNLLKTINKSALETKTTT--K---LSMLELHGNPFEDIGDFRWMDEHLNVKIPRLV |
2 | 6s6qA1 | 0.17 | 0.15 | 4.81 | 2.29 | SPARKS-K | | -------LQTLLEVKKSLVTNPQE--DDPLRQWNSDNINYCSWTGVTCDNTGLFRVIALNLTGLGLTGSIS----------PWFGRFDNLIHLDLSSNNLVGIPTALSNLTSLE------------SLFLFSNQLTGIPSQLVNIRSLRIGDNELVGDIPETLGNLVNLQMLALASCRLTGPIPSQLGRLVRVQSLILQDNYLEPIPAECSDLTVFTAAENMLNGT--IPAELGRLENLEILNLANNSLTEIPSQLGEQLQYLSLMANQLQGLIPKSLADLGN-------LQTLDLSANNLTGEI-PEEFWNMSQLLDLVLA |
3 | 6s6qA1 | 0.21 | 0.16 | 5.02 | 0.47 | MapAlign | | -------QTLLEVKKSLVT---------------------------------------------------------------NPQEDDPLRQWNSDNINYCSWTGVTCDNTGLFRVIALLTFGNLIHLDLSSNNLVGIPTLSTSLESLFLFSNQLTGIPS-QLGSLVNIRSLRIGDNELVGIPE-TLGNLVNLQMLALASCRLTPIPLGLVRVQSLILQDNYLEG-PIPA-ELGNCSDLTVFTAAENMLNTIPAELLENLEILNLANNSLTGIPS-QLGEM-------SQLQYLSLMANQLQG-LIPKSLADLGNLQTLDLS |
4 | 4u7lA | 0.17 | 0.16 | 5.29 | 0.28 | CEthreader | | -------------CPSRCTCSGDSLDCGGRGLAALPGDLPSSTRSLNLSYNKLSEIDPAGFEDLPNLQEVYLNNNELTAVPSLGAASSHVVSLFLQHNKIRSVGSQLKAYLSLEVLDLSLNNPPIKELNLAGNRIGTLEGLSRSLLTLRLSKNRITQLPVR-AFKLPRLTQLDLNRNRIRLIEGLTFQGLNSLEVLKLQRNNISKLTWGLSKMHVLHLEYNSLV--EVNSGSLYGLTALHQLHLSNNSIARIHRKGCQKLHELVLSFNNLTRLDEESLAELS-------SLSVLRLSHNSISH-IAEGAFKGLRSLRVLDLD |
5 | 4r5dA1 | 0.21 | 0.18 | 5.62 | 1.49 | MUSTER | | VSTPIKQIFPDDAFAETIKA------NLKKKSVTDAV-TQNELNSIDQIIANNSDI-----------KSVQG-----------IQYLPNVRYLALGGNKLHDI-SALKELTNL------------GWLNLSNNQLETLPQKLTNLTTLNLSNNQLTSLPQGVFERLASLTTLNLSNNQLTSLPQGVFERLTNLTTLNLSNNQLTSLPQGLTNLTTLNLSNNQL--TSLPQGVFERLTSLTTLNLSNNQLTSLPDGVFTNLKTLNLSNNQLTKEACRAVANA--LKQA-ASLHELHLSNNNIGEEGAAELVEALLHLET---- |
6 | 6g9lA | 0.17 | 0.16 | 5.31 | 0.74 | HHsearch | | FAFMLHLILRQLNLNNEWKLRQLAQDKLELHLFML-SGIPDTVFDLGLKELWLYHTAAKIEAPALAFLRLHIKFTDIKEIPLWIYSLKTLEELHLTGNLSAEVIDGLRELKRLKVLRLPVTDVHLQKLSINNEGTKLVLNKMVNLTELELIRCDLERIP-HSIFSLHNLQEIDLKDNNLKTIEEISFQHLHRLTCLKLWYNHIAYIPIQITNLERLYLNRNKIEK---IPTQLFYCRKLRYLDLSHNNLTFLPADILQNLQNLAVTANRIEALP-PELFQCR-------KLRALHLGNNVLQ-SL-PSRVGELTNLTQIELR |
7 | 2a0zA1 | 0.27 | 0.16 | 4.86 | 1.57 | FFAS-3D | | -----------------------------------------------------------------------------------------------------------------------KCTVSHEVADCSHLKLTQVPDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDFCTNLTELHL--MSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKQVQLENLQELLLSNNKIQALKSEELDIFAN-----SSLKKLELSSNQIK-EFSPGCFHAIGR------- |
8 | 6m04A | 0.16 | 0.15 | 4.98 | 0.88 | EigenThreader | | SIICVYGFICLYTLFWLFRIPLKEDIPDVKNDFAFLLHMVDQYDTFEKLRQHISRNAQDKQELHLFMLSGVPDAVFDLTDLDVLKLELIPEALCHCPAKVHLRCLHVKFTPAWVYLLKNLRELYLILHVKSNLTKVPSNITAPHLTKLVIHNDGTKLLVLNSLKKMMNVAELELQNCELERIP-HAIFSLSNLQELDLKSNNIRTIEEHLKRLTCLKLWHNKIV---TIPPSITHVKNLESLYFSNNKLESLPVAVLQNLQHLHITGNKVDILPK---QLFKCI-----KLRTLNLGQNCIT--SLPEKVGQLSQLTQLELK |
9 | 4kt1A | 0.20 | 0.15 | 4.66 | 4.51 | CNFpred | | ------------------------------------------------QALDISMNNITQLPED------------------AFKNFPFLEELQLAGNDLSFIHPALSGLKEL------------KVLTLQNNQLKTVPS-LSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSLTEVPVHPLSNLPTLQALTLALNKISSIP-NLSSLVVLHLHNNKIR--SLSQHCFDGLDNLETLDLNYNNLGEFPQAILPSLKELGFHSNSISVIPDGAFDGNP-------LLRTIHLYDNPLSFV-GNSAFHNLSDLHSLVIR |
10 | 3w3gA | 0.18 | 0.15 | 4.84 | 1.17 | DEthreader | | ---------------I--SE-FTRPLIKPQCAAYGKA--LDLSLNSI--------IACLNLSNNQEFIPHVKY--------------LSDLEVLDLS---YNSHY---I-----VTHHLEFIQFLKVLNLSHNNIYTLDNLESKLVELVFSGNRLDIWYISIFKGLKNLTRLDLSLNRLKHIPNEAFLNPASLTELHINDNMLKFFNWLFPRLELLDLRGNKL-LF-LTDSLSDFTSSLRTLLLSHNRISHLPGFSVSSLKHLDLSSNLLKTINKSALET-KTTT-K---LSMLELHGNPFEDIGDFRWMDEHLNVKIPRLV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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