Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| SS Seq | CHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCSSSCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCSSSSSCCSSSSSCCCCHHHHHHHHHHHHHCCSSSSCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHCHHSHHHSHHHSCCCCCCCCCCCCCCCCCCCCCCCCCCCCSCCCCCSSSSCCSSCCC MAFLGLFSLLVLQSMATGATFPEEAIADLSVNMYNRLRATGEDENILFSPLSIALAMGMMELGAQGSTQKEIRHSMGYDSLKNGEEFSFLKEFSNMVTAKESQYVMKIANSLFVQNGFHVNEEFLQMMKKYFNAAVNHVDFSQNVAVANYINKWVENNTNNLVKDLVSPRDFDAATYLALINAVYFKEQEIDLKDVLKALGITEIFIKDANLTGLSDNKEIFLSKAIHKSF |
1 | 1ophA | 0.31 | 0.28 | 8.52 | 1.50 | DEthreader | | -----------HPTF----NKITPNLAEFAFSLYRQLAHQSNSTNILFSPVSIAAAFAMLSLGAKGDTHDEILEGLNFLEIPEAQIHEGFQELLRTLNQDSQ-LQLTTGNGLFLSEGLKLVDKFLEDVKKLYHSEAFTVNFGDTEEAKKQINDYVEKGTQGKIVDLVK--ELDRDTVFALVNYIFFSTGTYDLKSVLGQLGITKVFSNGADLSGVTEEAPLKLSKAVHKAV |
2 | 3fgqA1 | 1.00 | 0.91 | 25.45 | 2.33 | SPARKS-K | | ---------------------PEEAIADLSVNMYNRLRATGEDENILFSPLSIALAMGMMELGAQGSTQKEIRHSMGYDSLKNGEEFSFLKEFSNMVTAKESQYVMKIANSLFVQNGFHVNEEFLQMMKKYFNAAVNHVDFSQNVAVANYINKWVENNTNNLVKDLVSPRDFDAATYLALINAVYFKEQEIDLKDVLKALGITEIFIKDANLTGLSDNKEIFLSKAIHKSF |
3 | 4au2A1 | 0.24 | 0.22 | 6.76 | 0.95 | MapAlign | | --------------LSPKAATLAERSAGLAFSLYQAMAKDQAVENILLSPVVVASSLGLVSLGGKATTASQAKAVLSAEQLRDEEVHAGLGELLRSLS----NVTWKLGSRLYGPSSVSFAEDFVRSSKQHYNCEHSKINFRDKRSALQSINEWAAQTTDGKLPEVTKD--VERTDGALLVNAMFFVEVTHDLQKHLAGLGLTEAIDKKADLSRMSGKKDLYLASVFHATA |
4 | 4au2A1 | 0.24 | 0.22 | 6.76 | 0.59 | CEthreader | | -------------MLSPKAATLAERSAGLAFSLYQAMAKDQAVENILLSPVVVASSLGLVSLGGKATTASQAKAVLSAEQLRDEEVHAGLGELLRSLS----NVTWKLGSRLYGPSSVSFAEDFVRSSKQHYNCEHSKINFRDKRSALQSINEWAAQTTDGKLPEVTKD--VERTDGALLVNAMFFGEVTHDLQKHLAGLGLTEAIDKKADLSRMSGKKDLYLASVFHATA |
5 | 3fgqA1 | 1.00 | 0.90 | 25.34 | 2.13 | MUSTER | | ---------------------PEEAIADLSVNMYNRLRATGEDENILFSPLSIALAMGMMELGAQGSTQKEIRHSMGYDSLKNGEEFSFLKEFSNMVTAKESQYVMKIANSLFVQNGFHVNEEFLQMMKKYFNAAVNHVDFSQNVAVANYINKWVENNTNNLVKDLVSPRDFDAATYLALINAVYFKGQEIDLKDVLKALGITEIFIKDANLTGLSDNKEIFLSKAIHKSF |
6 | 2ceoA1 | 0.30 | 0.27 | 8.15 | 1.64 | HHsearch | | -------------------YKMSSINADFAFNLYRRFTVETPDKNIFFSPVSISAALVMLSFGACCSTQTEIVETLGFNLTPMVEIQHGFQHLICSLNFPKKELELQIGNALFIGKHLKPLAKFLNDVKTLYETEVFSTDFSNISAAKQEINSHVEMQTKGKVVGLIQ--DLKPNTIMVLVNYIHFKSATYDLGATLLKMGIQHAYSENADFSGLTEDNGLKLSNAAHKA- |
7 | 2ceoA1 | 0.29 | 0.26 | 8.03 | 2.39 | FFAS-3D | | ---------------------MSSINADFAFNLYRRFTVETPDKNIFFSPVSISAALVMLSFGACCSTQTEIVETLGFNLTDTVEIQHGFQHLICSLNFPKKELELQIGNALFIGKHLKPLAKFLNDVKTLYETEVFSTDFSNISAAKQEINSHVEMQTKGKVVGLIQD--LKPNTIMVLVNYIHFKSATYDLGATLLKMGIQHAYSENADFSGLTEDNGLKLSNAAHKA- |
8 | 2h4rA1 | 0.33 | 0.30 | 9.11 | 1.47 | EigenThreader | | ---------------EISMEQVSASIGNFTVDLFNKLNETNRDKNIFFSPWSISSALALTYLAAKGSTAREMAEVLHFTE-AAENIHSGFKELLTAFNKPRNNYSLRSANRIYVEKTYALLPTYLQLSKKYYKAEPQKVFKTAPEQSRKEINTWVEKQTESKIKNLLSSDDVKATTRLILVNAIYFKSLEDRLRDTLRNMGMTTAFTTNADFRGMTDKKDLAISKVIHQSF |
9 | 3fgqA | 0.85 | 0.73 | 20.49 | 1.54 | CNFpred | | ---------------------PEEAIADLSVNMYNRLRATGEDENILFSPLSIALAMGMMELGAQGSTQKEIRHSMGYDSLKNGEEFSFLKEFSNMVTAKESQYVMKIANSLFVQNGFHVNEEFLQMMKKYFNAAVNHVDFSQNVAVANYINKWVENNTNNLVKDLVSPRDFDAATYLALINAVYFKGNW------------KSQFRPENRTFSFTKESEVQIPMMYQQGE |
10 | 2h4rA | 0.34 | 0.31 | 9.34 | 1.50 | DEthreader | | ----------------EISEQVSASIGNFTVDLFNKLNETNRDKNIFFSPWSISSALALTYLAAKGSTAREMAEVLHFTEA-AENIHSGFKELLTAFNKPRNNYSLRSANRIYVEKTYALLPTYLQLSKKYYKAEPQKVNFKAPEQSRKEINTWVEKQTESKIKNLLSSDDVKATTRLILVNAIYFLEDRIDLRDTLRNMGMTTAFTTNADFRGMTDKKDLAISKVIHQSF |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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