Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 580 600 620
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| SS Seq | CCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCSSSSSHHHHCCCCCCCCCSSSSCCCCCCCCSSSSSSSSSCCCCCCSSSSSCCSSSSSSSCCSSSSSSSCCCCCSSSSSSSSCCCCCCSSSSCCCCCCCCCSSSSSCCCCCSSSSSSSCCCCCCSSSSSSCCCCCSSSSSSCCCCCCCCCCCSSSSSSCCCCCSSSSSSSCCCCCSSSSSSSCCCCCSSSCCCCCCCCCCCCCCCCCCCCSSSSSSSSSCCCCCCCCCCCCCCCCCSSSSSSCCCCCCCCCCCCCSSSSCCCCCCCSSCCCCCCSSSSCCCCCSSSSSSCCCCCCCSSSSSCCCCCCSSSSSCCCCSSSSSSSSSCCCCCCSSSSSSSSCCCCCCCCSSSSSSSCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSSCCCCCCSCCCCCCCCCSSSCCCCCHHHCCCCCCCSSCCCCCCSSSCCCCCCCCHHHCCCCCCSSSCCCCSSSCCCCSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHSSSSSSCCCCCCCCSSSCCSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCC MERPWGAADGLSRWPHGLGLLLLLQLLPPSTLSQDRLDAPPPPAAPLPRWSGPIGVSWGLRAAAAGGAFPRGGRWRRSAPGEDEECGRVRDFVAKLANNTHQHVFDDLIYSFGLGGRFLFASVMADKDTTRRIHVSTDQGDTWSMAQLPSVGQEQFYSILAANDDMVFMHVDEPGDTGFGTIFTSDDRGIVYSKSLDRHLYTTTGGETDFTNVTSLRGVYITSVLSEDNSIQTMITFDQGGRWTHLRKPENSECDATAKNKNECSLHIHASYSISQKLNVPMAPLSEPNAVGIVIAHGSVGDAISVMVPDVYISDDGGYSWTKMLEGPHYYTILDSGGIIVAIEHSSRPINVIKFSTDEGQCWQTYTFTRDPIYFTGLASEPGARSMNISIWGFTESFLTSQWVSYTIDFKDILERNCEEKDYTIWLAHSTDPEDYEDGCILGYKEQFLRLRKSSVCQNGRDYVVTKQPSICLCSLEDFLCDFGYYRPENDSKCVEQPELKGHDLEFCLYGREEHLTTNGYRKIPGDKCQGGVNPVREVKDLKKKCTSNFLSPEKQNSKSNSVPIILAIVGLMLVTVVAGVLIVKKYVCGGRFLVHRYSVLQQHAEANGVDGVDALDTASHTNKSGYHDDSDEDLLE |
1 | 3f6kA | 0.85 | 0.64 | 17.96 | 1.00 | DEthreader | | ------GGRI----------------------------------------VSKNWEEIH---------------NTI-FTTYA---------RTSDGKSFKTIGVKIYS-FG-LGGRFLFASVMADKDTTRRIHVSTDQGDTWSMAQLPSVGQEQFYSILAANDDMVFMHVDEPGDTGFGTIFTSDDRGIVYSKSLDRHLYTTTGGETDFTNVTSLRGVYITSVLSEDNSIQTMITFDQGGRWTHLRKPENSECDATANKNECSLHIHASYSISQKLNVP-MAPLSEPNAVGIVIAHGSVGDAISVMVPDVYISDDGGYSWTKMLEGPHYYTILDSGGIIVAIEHSSRPINVIKFSTDEGQCWQTYTFTRDPIYFTGLASEPGARSMNISIWGFTESFLTSQWVSYTIDFKDILERNCEEKDYTIWLAHSTDPEDYEDGCILGYKEQFLRLRKSSMCQNGRDYVVTKQPSICLCSLEDFLCDFGYYRPENDSKCVEQPELKDLEFCLYGR--EEHLTTNGYRKIPGDKCQGGVNPVREVKDLKKKCTSNFLSPE-K--------------------------------------------------------------------------------- |
2 | 6ffyA | 0.22 | 0.20 | 6.41 | 6.26 | HHsearch | | EQSLFLSTDEGATFQK------YPVP-----FLVETLLFHPKEE-DKVLAYTK--------DSKLYVSSDLGKKWTLLQDPNLVHVEAQDLGGYRYYTCLIYAPFSGDRGSLTVQDEYIFLKATST--NRTKYYVSYR-RSDFVLMKLPKYALPKDLQIISTDEQQVFVAVQEWNQVDTYNLYQSDLRGVRYSLVLENVR-SSENVVIDILEVRGVKGVFLANQKV-DGKVTTVITYNKGRDWDYLRPPSTDMNGPTNCQPPDCYLHLHLRWADN--PYVSGTVHTKDTAPGLIMGAGNLGSQLVEKE-EMYITSDCGHTWRQVFEEEHHVLYLDHGGVIAAIKDTSIPLKILKFSVDEGHTWSTHNFTSTSVFVDGLLSEPGDETLVMTVFGHISF--RSDWELVKVDFRPSFPRQCGEDDYSSWDLTDL----QGDHCIMGQQRSYRKRKSTSWCVKGRSFTSALTSRVCKCRDSDFLCDYGFERSSSANKCSANFWFNPSPPEDCVLG-QTYTSSLGYRKVVSNVCEGGVDLQQS--PVQLQCPLQAPRGLQVSLTTLGDGFKAMYVLTLTGEPPGIYRVSVRMDEAVLFVQVNSPLQALYLEVVNLTA-VLL-NPNLTVFYWWIGHSLQPLLS |
3 | 3f6kA | 0.83 | 0.71 | 20.02 | 3.72 | SPARKS-K | | LTAEVSGGSRGGRIFRSSDFAKNFVQTDLPFHPLTQMMYSPQN-SDYLLALSTENG--------LWVSKNFGGKWEEIGSDNTIFFTTYANGSCKADLGALFKTIGVKIYSFGLGGRFLFASVMADKDTTRRIHVSTDQGDTWSMAQLPSVGQEQFYSILAANDDMVFMHVDEPGDTGFGTIFTSDDRGIVYSKSLDRHLYTTTGGETDFTNVTSLRGVYITSVLSEDNSIQTMITFDQGGRWTHLRKPENSECDATAKNKNECSLHIHASYSISQKLNVPMAPLSEPNAVGIVIAHGSVGDAISVMVPDVYISDDGGYSWTKMLEGPHYYTILDSGGIIVAIEHSSRPINVIKFSTDEGQCWQTYTFTRDPIYFTGLASEPGARSMNISIWGFTESFLTSQWVSYTIDFKDILERNCEEKDYTIWLAHSTDPEDYEDGCILGYKEQFLRLRKSSMCQNGRDYVVTKQPSICLCSLEDFLCDFGYYRPENDSKCVEQPELKGHDLEFCLYGREEHLTTNGYRKIPGDKCQGGVNPVREVKDLKKKCTSNFLSPEK---------------------------------------------------------------------------------- |
4 | 6ffyA | 0.23 | 0.21 | 6.55 | 3.67 | SPARKS-K | | LTLQPGVTTVIDNFYICPAKIILVSSSLGVPFLVETLLFHPKEE-DKVLAYTKDS--------KLYVSSDLGKKWTLLQERNLVHVEAQDGGYRCLIYNCHIAPFSGPIGSLTVQDEYIFLKATSTNRT--KYYVSYR-RSDFVLMKLPKYALPKDLQIISTDEQQVFVAVQEWNQVDTYNLYQSDLRGVRYSLVLENVRSSRENVVIDILEVRGVKGVFLANQKVD-GKVTTVITYNKGRDWDYLRPPSTDNGKPTNCQPPDCYLHLHLRWADNP--YVSGTVHTKDTAPGLIMGAGNLGSQLVEYKEEMYITSDCGHTWRQVFEEEHHVLYLDHGGVIAAIKDTSIPLKILKFSVDEGHTWSTHNFTSTSVFVDGLLSEPGDETLVMTVFGHISF--RSDWELVKVDFRPSFPRQCGEDDYSSWDLTD----LQGDHCIMGQQRSYRKRKSTSWCVKGRSFTSALTSRVCKCRDSDFLCDYGFERSSSANKCSANFWFNPSPPEDCVLGQT-YTSSLGYRKVVSNVCEGGVDLQQSPV--QLQCPLQAPRGEAVAVRPRE----------------------------DVLFVVRQEQGDQVDLGDGFK--AMYVNLTLTGEPHYESPGIYRVSV |
5 | 3f6kA | 0.82 | 0.71 | 19.98 | 1.18 | MapAlign | | --GGRIFRSSDFAKNFVQTDLPFHPLTQMMYSPQNSDYLLALSTENGLWVSKNFGGKWEEIHKAVCLAKDNTIFFTTYANGSCKADLGALELWRTSDLGKSFKTIGVKIYSFGLGGRFLFASVMADKDTTRRIHVSTDQGDTWSMAQLPSVGQEQFYSILAANDDMVFMHVDEPGDTGFGTIFTSDDRGIVYSKSLDRHLYTTTGGETDFTNVTSLRGVYITSVLSEDNSIQTMITFDQGGRWTHLRKPENSECDATAKNKNECSLHIHASYSISQKLNVPMAPLSEPNAVGIVIAHGSVGDAISVMVPDVYISDDGGYSWTKMLEGPHYYTILDSGGIIVAIEHSSRPINVIKFSTDEGQCWQTYTFTRDPIYFTGLASEPGARSMNISIWGFTESFLTSQWVSYTIDFKDILERNCEEKDYTIWLAHSTDPEDYEDGCILGYKEQFLRLRKSSMCQNGRDYVVTKQPSICLCSLEDFLCDFGYYRPENDSKCVEQPELKGHDLEFCLYGREEHLTTNGYRKIPGDKCQGGVNPVREVKDLKKKCTSNF--------------------------------------------------------------------------------------- |
6 | 6ffyA | 0.20 | 0.19 | 6.01 | 1.13 | MapAlign | | -------------------------------NQAMVHWTGENSSVILILTKYYHADMGKVLESSLWRSSDFGTTYTKLTLQPGVDLSGGYRYYTCLIYNCHIAPFSGPIDGSLTVDEYIFLKATS--TNRTKYYVSYR-RSDFVLMKLPKYALPKDLQIISTDEQQVFVAVQEWNQVDTYNLYQSDLRGVRYSLVLENVRSAEENVVIDILEVRGVKGVFLANQKV-DGKVTTVITYNKGRDWDYLRPPSTDGKPTNCQ-PPDCYLHLHLRWADNPYVSGTVHTKDT--APGLIMGAGNLGSQLVEYKEEMYITSDCGHTWRQVFEEEHHVLYLDHGGVIAAIKDTSIPLKILKFSVDEGHTWSTHNFTSTSVFVDGLLSEPGDETLVMTVFGHISF--RSDWELVKVDFRPSFPRQCGEDDYSSWDLTD----LQGDHCIMGQQRSYRKRKSTSWCVKGRSFTSALTSRVCKCRDSDFLCDYGFERSSTANKCSANFWFNPLSPPEDCVLGQTYTSSLGYRKVVSNVCEGGVDLQ-QSPVQLQCPVPLRFSRELDTFNPNTPEWREDVGLVVTRLLSKEVVKPGLPTIADLYVLLPLTSDKRLAAVQQALNSHRISFILRGGLRILVELR------ |
7 | 3f6kA | 0.81 | 0.71 | 20.03 | 0.84 | CEthreader | | LTAEVSGGSRGGRIFRSSDFAKNFVQTDLPFHPLTQMMYSPQNSDYLLALSTENGLWVSKNFGGKWEEIHKAVCLAKWGSDNTIFFTTYANGSCKADLGALFKTIGVKIYSFGLGGRFLFASVMADKDTTRRIHVSTDQGDTWSMAQLPSVGQEQFYSILAANDDMVFMHVDEPGDTGFGTIFTSDDRGIVYSKSLDRHLYTTTGGETDFTNVTSLRGVYITSVLSEDNSIQTMITFDQGGRWTHLRKPENSECDATAKNKNECSLHIHASYSISQKLNVPMAPLSEPNAVGIVIAHGSVGDAISVMVPDVYISDDGGYSWTKMLEGPHYYTILDSGGIIVAIEHSSRPINVIKFSTDEGQCWQTYTFTRDPIYFTGLASEPGARSMNISIWGFTESFLTSQWVSYTIDFKDILERNCEEKDYTIWLAHSTDPEDYEDGCILGYKEQFLRLRKSSMCQNGRDYVVTKQPSICLCSLEDFLCDFGYYRPENDSKCVEQPELKGHDLEFCLYGREEHLTTNGYRKIPGDKCQGGVNPVREVKDLKKKCTSNFLSPEK---------------------------------------------------------------------------------- |
8 | 6ffyA | 0.23 | 0.22 | 6.95 | 1.89 | MUSTER | | LTLQPGVTTVIDNFYICPAKIILVSSSLGVPFLVETLLFHPKEEDSKLYVSSDLGKKWTLLQERVTKDHVFWAVSGVDDDPNLVHVEAQDLSYTCLIYNCHIAPFSGPIGSLTVQDEYIFLKAT--STNRTKYYVSYR-RSDFVLMKLPKYALPKDLQIISTDEQQVFVAVQEWNQVDTYNLYQSDLRGVRYSLVLENVRSAEENVVIDILEVRGVKGVFLANQKV-DGKVTTVITYNKGRDWDYLRPPSTDMNGKPTNQPPDCYLHLHLRWADN--PYVSGTVHTKDTAPGLIMGAGNLGSQLVEYKEEMYITSDCGHTWRQVFEEEHHVLYLDHGGVIAAIKDTSIPLKILKFSVDEGHTWSTHNFTSTSVFVDGLLSEPGDETLVMTVFGHISF--RSDWELVKVDFRPSFPRQCGEDDYSSWDLTDL----QGDHCIMGQQRSYRKRKSTSWCVKGRSFTSALTSRVCKCRDSDFLCDYGFERSSSANKCSANFWFNPSPPEDCVLGQT-YTSSLGYRKVVSNVCEGGVDLQQS--PVQLQCPLQAPRGEAVAVRPREDVLFVVFKAMYVNLTLTGEPIRHHYESPGLFVQVNSPLQALYLEVVPVIGVNQEVNLTNPNLTVFIGHSLQPLLD |
9 | 3f6kA | 0.83 | 0.71 | 20.14 | 2.56 | MUSTER | | NNTFIRTEFGMAIGPENSGKVVLTAEVSGGSRGLTQMMYSPQNSD-YLLALSTEN--------GLWVSKNFGGKWEEIGSDNTIFFTTYANGSCKADLGALFKTIGVKIYSFGLGGRFLFASVMADKDTTRRIHVSTDQGDTWSMAQLPSVGQEQFYSILAANDDMVFMHVDEPGDTGFGTIFTSDDRGIVYSKSLDRHLYTTTGGETDFTNVTSLRGVYITSVLSEDNSIQTMITFDQGGRWTHLRKPENSECDATAKNKNECSLHIHASYSISQKLNVPMAPLSEPNAVGIVIAHGSVGDAISVMVPDVYISDDGGYSWTKMLEGPHYYTILDSGGIIVAIEHSSRPINVIKFSTDEGQCWQTYTFTRDPIYFTGLASEPGARSMNISIWGFTESFLTSQWVSYTIDFKDILERNCEEKDYTIWLAHSTDPEDYEDGCILGYKEQFLRLRKSSMCQNGRDYVVTKQPSICLCSLEDFLCDFGYYRPENDSKCVEQPELKGHDLEFCLYGREEHLTTNGYRKIPGDKCQGGVNPVREVKDLKKKCTSNFLSPEK---------------------------------------------------------------------------------- |
10 | 6ffyA | 0.24 | 0.19 | 5.82 | 3.11 | FFAS-3D | | -------------------------------------------KDSKLYVSSDLGKKWTLLQERVTKDHVFWAVSGVDDDPNLVHVEAQDLYYTCLIYNCHIAPFSGPIDSLTVQDEYIFLKATSTNRT--KYYVSYR-RSDFVLMKLPKYALPKDLQIISTDEQQVFVAVQEWNQVDTYNLYQSDLRGVRYSLVLENVRSAEENVVIDILEVRGVKGVFLANQKV-DGKVTTVITYNKGRDWDYLRPPSTDMNGKPTNCQPDCYLHLHLRWADNPY--VSGTVHTKDTAPGLIMGAGNLGSQLVEYKEEMYITSDCGHTWRQVFEEEHHVLYLDHGGVIAAIKDTSIPLKILKFSVDEGHTWSTHNFTSTSVFVDGLLSEPGDETLVMTVFGHISF--RSDWELVKVDFRPSFPRQCGEDDYSSWDLTD----LQGDHCIMGQQRSYRKRKSTSWCVKGRSFTSALTSRVCKCRDSDFLCDYGFERSSSSESTSANFWFNPLSPPEDCVLGQTYTSSLGYRKVVSNVCEGGVDLQQ--SPVQLQCPLQAPR------------------------------------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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