Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Download alignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380
| | | | | | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCSSSSSSCCCCCCCSSSSSSSCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCSSCCCCCCCCCCCCCCCCCSSSSSCCCCCCCCCHHHHHHHHHHCCCSSSSSCCCCCCCCSSSCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCSSSCCCCCCHHHHHHHCCCCCCSSSSSSCCCCCCCCCCCCCCCCCCSSSSSCCCCCCCCCHHHHHHHHHCCCCCSSSSSCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCC MGVNQSVGFPPVTGPHLVGCGDVMEGQNLQGSFFRLFYPCQKAEETMEQPLWIPRYEYCTGLAEYLQFNKRCGGLLFNLAVGSCRLPVSWNGPFKTKDSGYPLIIFSHGLGAFRTLYSAFCMELASRGFVVAVPEHRDRSAATTYFCKQAPEENQPTNESLQEEWIPFRRVEEGEKEFHVRNPQVHQRVSECLRVLKILQEVTAGQTVFNILPGGLDLMTLKGNIDMSRVAVMGHSFGGATAILALAKETQFRCAVALDAWMFPLERDFYPKARGPVFFINTEKFQTMESVNLMKKICAQHEQSRIITVLGSVHRSQTDFAFVTGNLIGKFFSTETRGSLDPYEGQEVMVRAMLAFLQKHLDLKEDYNQWNNLIEGIGPSLTPGAPHHLSSL |
1 | 3f98A | 0.41 | 0.39 | 11.48 | 1.33 | DEthreader | | -----QTKIPRGNGPYSVGCTDLMFDHTNKGTFLRLYYPSQDN--DRLDTLWIPNKEYFWGLSKFLGTHWLMGNI-LRLLFGSMTTPANWNSPLRPG-EKYPLVVFSHGLGAFRTLYSAIGIDLASHGFIVAAVEHRRSASATYYFKDQSAAE--I--GDK-SW-LYLRTLKQ-EEETHIRNEQVRQRAKECSQALSLILDIDHGKPVKNALDLKFDMEQLKDSIDREKIAVIGHSFGGATVIQTLSEDQRFRCGIALDAWMFPLGDEVYSRIPQPLFFINSEYFQYPANIIKMKKCYSPDKERKMITIRGSVHQNFADFTFATGIIGHMLKL---KGDIDSNVAIDLSNKASLAFLQKHLGLHKDFDQWDCLIEGDD-E-NLIPGTNINT- |
2 | 3f98A | 0.42 | 0.41 | 11.98 | 2.37 | SPARKS-K | | -ASFGQTKIPRGNGPYSVGCTDLMFDHTNKGTFLRLYYPSQDNDRLD--TLWIPNKEYFWGLSKFLGTHWL-MGNILRLLFGSMTTPANWNSPLRPG-EKYPLVVFSHGLGAFRTLYSAIGIDLASHGFIVAAVEHRDRSASATYYFKD-----QSAAEIGDKSWLYLRTLKQ-EEETHIRNEQVRQRAKECSQALSLILDIDHGKPVKNALDLKFDMEQLKDSIDREKIAVIGHSFGGATVIQTLSEDQRFRCGIALDAWMFPLGDEVYSRIPQPLFFINSEYFQYPANIIKMKKCYSPDKERKMITIRGSVHQNFADFTFATGK--IIGHMLKLKGDIDSNVAIDLSNKASLAFLQKHLGLHKDFDQWDCLIEGDDENLIPGTNINTT-- |
3 | 3f98A | 0.44 | 0.41 | 11.88 | 0.87 | MapAlign | | -----QTKIPRGNGPYSVGCTDLMFDHTNKGTFLRLYYPSQDN--DRLDTLWIPNKEYFWGLSKFLGTHWLMGNILRLL-FGSMTTPANWNSPLRP-GEKYPLVVFSHGLGAFRTLYSAIGIDLASHGFIVAAVEHRDSASATYYFKDQS------AAEIGDKSWLYLRTLKQ-EEETHIRNEQVRQRAKECSQALSLILDIDHGKPVKNALDLKFDMEQLKDSIDREKIAVIGHSFGGATVIQTLSEDQRFRCGIALDAWMFPLGDEVYSRIPQPLFFINSEYFQYPANIIKMKKCYSPDKERKMITIRGSVHQNFADFTFATGKIIGHML--KLKGDIDSNVAIDLSNKASLAFLQKHLGLHKDFDQWDCLIEGDDENL----------- |
4 | 3f98A | 0.42 | 0.40 | 11.84 | 1.16 | CEthreader | | -ASFGQTKIPRGNGPYSVGCTDLMFDHTNKGTFLRLYYPSQDND--RLDTLWIPNKEYFWGLSKFLGTH-WLMGNILRLLFGSMTTPANWNSPLRPGE-KYPLVVFSHGLGAFRTLYSAIGIDLASHGFIVAAVEHRDRSASATYYFKDQS----AAEIGDKSWLYLRTLKQ--EEETHIRNEQVRQRAKECSQALSLILDIDHGKPVKNALDLKFDMEQLKDSIDREKIAVIGHSFGGATVIQTLSEDQRFRCGIALDAWMFPLGDEVYSRIPQPLFFINSEYFQYPANIIKMKKCYSPDKERKMITIRGSVHQNFADFTFATGKIIGHMLKLK--GDIDSNVAIDLSNKASLAFLQKHLGLHKDFDQWDCLIEGDDENLIPGTNINTT-- |
5 | 3f98A | 0.42 | 0.41 | 11.98 | 2.21 | MUSTER | | -ASFGQTKIPRGNGPYSVGCTDLMFDHTNKGTFLRLYYPSQDNDR--LDTLWIPNKEYFWGLSKFLGTH-WLMGNILRLLFGSMTTPANWNSPLRPG-EKYPLVVFSHGLGAFRTLYSAIGIDLASHGFIVAAVEHRDRSASATYYFKDQSAAEIGDK-----SWLYLRTLK-QEEETHIRNEQVRQRAKECSQALSLILDIDHGKPVKNALDLKFDMEQLKDSIDREKIAVIGHSFGGATVIQTLSEDQRFRCGIALDAWMFPLGDEVYSRIPQPLFFINSEYFQYPANIIKMKKCYSPDKERKMITIRGSVHQNFADFTFATGKIIGHMLK--LKGDIDSNVAIDLSNKASLAFLQKHLGLHKDFDQWDCLIEGDDENLIPGTNINTT-- |
6 | 3f98A | 0.42 | 0.41 | 11.91 | 1.96 | HHsearch | | -ASFGQTKIPRGNGPYSVGCTDLMFDHTNKGTFLRLYYPSQDND--RLDTLWIPNKEYFWGLSKFLGTHWLMG-NILRLLFGSMTTPANWNSPLRPG-EKYPLVVFSHGLGAFRTLYSAIGIDLASHGFIVAAVEHRDRSASATYYFKDQSAAE----IGD-KSWLYLRTLKQE-EETHIRNEQVRQRAKECSQALSLILDIDHGKPVKNALDLKFDMEQLKDSIDREKIAVIGHSFGGATVIQTLSEDQRFRCGIALDAWMFPLGDEVYSRIPQPLFFINSEYFQYPANIIKMKKCYSPDKERKMITIRGSVHQNFADFTFATGKIIGHMLK--LKGDIDSNVAIDLSNKASLAFLQKHLGLHKDFDQWDCLIEGDDENLIPGTNINTT-- |
7 | 3f98A | 0.42 | 0.41 | 11.98 | 3.39 | FFAS-3D | | -ASFGQTKIPRGNGPYSVGCTDLMFDHTNKGTFLRLYYPSQDNDR--LDTLWIPNKEYFWGLSKFLGTHWLMGNIL-RLLFGSMTTPANWNSPLR-PGEKYPLVVFSHGLGAFRTLYSAIGIDLASHGFIVAAVEHRDRSASATYYFKDQSAAEIGDK------SWLYLRTLKQEEETHIRNEQVRQRAKECSQALSLILDIDHGKPVKNALDLKFDMEQLKDSIDREKIAVIGHSFGGATVIQTLSEDQRFRCGIALDAWMFPLGDEVYSRIPQPLFFINSEYFQYPANIIKMKKCYSPDKERKMITIRGSVHQNFADFTFATGKIIGHM--LKLKGDIDSNVAIDLSNKASLAFLQKHLGLHKDFDQWDCLIEGDDENLIPGTNINTT-- |
8 | 3f98A | 0.41 | 0.38 | 11.27 | 1.20 | EigenThreader | | -ASFGQTKIPRGNGPYSVGCTDLMFDHTNKGTFLRLYYPDND----RLDTLWIPNKEYFWGLSKFLGTHWLMGNILRLLFG-SMTTPANWNSPLRPG-EKYPLVVFSHGLGAFRTLYSAIGIDLASHGFIVAAVEHRDRSASATYYF----KDQSAAEIGDKSWLYL--RTLKQEEETHIRNEQVRQRAKECSQALSLILDIDHGKPVKNALDLKFDMEQLKDSIDREKIAVIGHSFGGATVIQTLSEDQRFRCGIALDAWMFPLGDEVYSRIPQPLFFINSEYFQYPANIIKMKKCYSPDKERKMITIRGSVHQNFADFTFAIIGHML-----KLKGDIDSNVAIDLSNKASLAFLQKHLGLHKDFDQWDCLIEGDDENTNINTT------ |
9 | 5i8pA | 0.43 | 0.41 | 11.89 | 3.40 | CNFpred | | ------TKIPRGNGPYSVGCTDLMFDHTNKGTFLRLYYPSQDN--DRLDTLWIPNKEYFWGLSKFLGTHWLMGN-ILRLLFGSMTTPANWNSPLRP-GEKYPLVVFSHGLGAFRTLYSAIGIDLASHGFIVAAVEHRDRSASATYYFKDQSAAEI-----GDKSWLYLRTLKQE-EETHIRNEQVRQRAKECSQALSLILDIDHGKPVKNALDLKFDMEQLKDSIDREKIAVIGHSFGGATVIQTLSEDQRFRCGIALDAWMFPLGDEVYSRIPQPLFFINSEYFQYPANIIKMKKCYSPDKERKMITIRGSVHQNFADFTFATGKIIGHMLKL--KGDIDSNVAIDLSNKASLAFLQKHLGLHKDFDQWDCLIEGDDENLIPG-------- |
10 | 5yaeA | 0.18 | 0.15 | 4.82 | 1.17 | DEthreader | | ----AGQEVAAPATRIPLGTKTLHLVDANRELMVTLWYPSLPS--REPAAPYVSKPLSRAVLG----------N---D-VLAGVRTHAVAGARPAPV--PRPLVVLSPGFGMSRITLTALGEDLASRGYAVAAVDHTYEA-PVEFP-G------------GRIEKCTLCDDS---RM-D-PGAVVRNRAKDLRFVLDRLTG----PGS---------E--LR--VDARRIGVAGHSIGGASAVEVMREDRRVDAAINLDGNFF-T-EPPAEGLNKPVLLLGARRSGLPEPQENWERAWKQTGWKRWLDVPAGGHMTFTDVPWIVDRGMPGIPPEVEGGTVSAARATAVTRNYVAAFFDRHLRGR--P---SPLLDRPSSAHP-EVTFMK--- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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