>Q96T52 (175 residues) MAQSQGWVKRYIKAFCKGFFVAVPVAVTFLDRVACVARVEGASMQPSLNPGGSQSSDVVL LNHWKVRNFEVHRGDIVSLVSPKNPEQKIIKRVIALEGDIVRTIGHKNRYVKVPRGHIWV EGDHHGHSFDSNSFGPVSLGLLHAHATHILWPPERWQKLESVLPPERLPVQREEE |
Sequence |
20 40 60 80 100 120 140 160 | | | | | | | | MAQSQGWVKRYIKAFCKGFFVAVPVAVTFLDRVACVARVEGASMQPSLNPGGSQSSDVVLLNHWKVRNFEVHRGDIVSLVSPKNPEQKIIKRVIALEGDIVRTIGHKNRYVKVPRGHIWVEGDHHGHSFDSNSFGPVSLGLLHAHATHILWPPERWQKLESVLPPERLPVQREEE |
Prediction | CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSSSSSCCCCCCCCSCCCCCCCCSSSSSSSSSCCCCCCCCCCSSSSSCCCCCCCCSSSSSSSCCCCSSSSCCCCCCSSSSCCCCSSSSCCCCCCCCCCCCCCCCCHHHSSSSSSSSSCCHHHCCSCCCCCCCCCCCCCCCCC |
Confidence | 9976404799999999999987778764442178999977987676417887533409999966314899983729999499999972899676279919997489984388389919995889998875677465237774899999996836651158879834588772349 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 | | | | | | | | MAQSQGWVKRYIKAFCKGFFVAVPVAVTFLDRVACVARVEGASMQPSLNPGGSQSSDVVLLNHWKVRNFEVHRGDIVSLVSPKNPEQKIIKRVIALEGDIVRTIGHKNRYVKVPRGHIWVEGDHHGHSFDSNSFGPVSLGLLHAHATHILWPPERWQKLESVLPPERLPVQREEE |
Prediction | 7565463124103330312222212231232211101305342030003444434201000110224456042110000311744632100000035423041455744204026310000001372140012213034730202010201235304406434446314354588 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 | | | | | | | | | |||||||||||||
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SS Seq | CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSSSSSCCCCCCCCSCCCCCCCCSSSSSSSSSCCCCCCCCCCSSSSSCCCCCCCCSSSSSSSCCCCSSSSCCCCCCSSSSCCCCSSSSCCCCCCCCCCCCCCCCCHHHSSSSSSSSSCCHHHCCSCCCCCCCCCCCCCCCCC MAQSQGWVKRYIKAFCKGFFVAVPVAVTFLDRVACVARVEGASMQPSLNPGGSQSSDVVLLNHWKVRNFEVHRGDIVSLVSPKNPEQKIIKRVIALEGDIVRTIGHKNRYVKVPRGHIWVEGDHHGHSFDSNSFGPVSLGLLHAHATHILWPPERWQKLESVLPPERLPVQREEE | |||||||||||||||||||
1 | 1b12A | 0.27 | 0.19 | 5.97 | 1.00 | DEthreader | ----------------------------S--FIYEPFQIPSGSMMPTLLI-----GDFILVEKFAYETGHPKRGDIVVFKYPEDPKLDYIKRAVGLPGDKVTYDPDVLATWIVPPGQYFMMGDNRDNSADSRYWGFVPEANLVGRATAIWMSRLSRIGGIH-------------- | |||||||||||||
2 | 1b12A | 0.29 | 0.21 | 6.27 | 1.82 | SPARKS-K | -----------------------------RSFIYEPFQIPSGSMMPTLLIG-----DFILVEKFAYETGHPKRGDIVVFKYPEDPKLDYIKRAVGLPGDKVTYDPQQLATWIVPPGQYFMMGDNRDNSADSRYWGFVPEANLVGRATAIWMSFDRIGGIH--------------- | |||||||||||||
3 | 1b12A | 0.28 | 0.20 | 6.11 | 1.50 | MapAlign | -----------------------------RSFIYEPFQIPSGSMMPTLLI-----GDFILVEKFLIETGHPKRGDIVVFKYPEDPKLDYIKRAVGLPGDKVTYDSKELTIWIVPPGQYFMMGDNRDNSADSRYWGFVPEANLVGRATAIWMSLSRIGGI---------------- | |||||||||||||
4 | 1b12A | 0.28 | 0.20 | 6.12 | 1.44 | CEthreader | -----------------------------RSFIYEPFQIPSGSMMPTLLIGD-----FILVEKFAYETGHPKRGDIVVFKYPEDPKLDYIKRAVGLPGDKVTYDPVQLATWIVPPGQYFMMGDNRDNSADSRYWGFVPEANLVGRATAIWMSLSRIGGIH--------------- | |||||||||||||
5 | 4k8wA | 0.23 | 0.13 | 3.93 | 1.22 | MUSTER | ------------------------------------------------SAG-----DGVLYYRLTD---RYHINDVVVYEVD---NTLKVGRIAAQAGDEVSFTSGPNFPYKVPTGTYFILNDYREERLDSRYYGALPINQIKGKISTLLRVR---------------------- | |||||||||||||
6 | 1b12A | 0.29 | 0.21 | 6.27 | 4.77 | HHsearch | -----------------------------RSFIYEPFQIPSGSMMPTLLIG-----DFILVEKFAYGIGHPKRGDIVVFKYPEDPKLDYIKRAVGLPGDKVTYDSKQLATWIVPPGQYFMMGDNRDNSADSRYWGFVPEANLVGRATAIWMSLSRIGGIH--------------- | |||||||||||||
7 | 1b12A | 0.29 | 0.21 | 6.27 | 1.59 | FFAS-3D | -----------------------------RSFIYEPFQIPSGSMMPTLLIG-----DFILVEKFAYETGHPKRGDIVVFKYPEDPKLDYIKRAVGLPGDKVTYDPQQLATWIVPPGQYFMMGDNRDNSADSRYWGFVPEANLVGRATAIWMSLSRIGGIH--------------- | |||||||||||||
8 | 1b12A | 0.26 | 0.19 | 5.83 | 1.07 | EigenThreader | --------------------------------RSFIYEIPSGSMMPTLLI----GDFILVEKFAPIYQKHPKRGDIVVFKYPEDPKLDYIKRAVGLPGDKVTYDPQQLATWIVPPGQYFMMGDNRDNSADSRYWGFVPEANLVGRATAIWM-----SFDGLRLSRIGGIH----- | |||||||||||||
9 | 4n31A | 0.23 | 0.14 | 4.48 | 1.21 | CNFpred | ----------------------------------GVMIINTNDMSPALSA-----GDGVLYYRL---TDRYHINDVVVYEVD---NTLKVGRIAAQAGDEVSFTQ-PNFPYKVPTGTYFILNDYREERLDSRYYGALPINQIKGKISTLLRVRGI-------------------- | |||||||||||||
10 | 6a69A | 0.08 | 0.07 | 2.66 | 0.83 | DEthreader | -ETG-WIEGAAILLSVVCVVLVTAFNDWSKEKQFR--SVLQ-------GKLTKLALPAVSLYVKKMMKDNN------LVR----HLDACEMGAISTLRVPIQTVWPKLRVL------------DQRQVVAVTADVGFAMGIILAWNVSISKFLQIMARKIHNEGIFNNFTIVGTV | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |