Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520
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| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHSCCHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCSSSSSCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHSCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MAAAAAAAGAAGSAAPAAAAGAPGSGGAPSGSQGVLIGDRLYSGVLITLENCLLPDDKLRFTPSMSSGLDTDTETDLRVVGCELIQAAGILLRLPQVAMATGQVLFQRFFYTKSFVKHSMEHVSMACVHLASKIEEAPRRIRDVINVFHRLRQLRDKKKPVPLLLDQDYVNLKNQIIKAERRVLKELGFCVHVKHPHKIIVMYLQVLECERNQHLVQTSWNYMNDSLRTDVFVRFQPESIACACIYLAARTLEIPLPNRPHWFLLFGATEEEIQEICLKILQLYARKKVDLTHLEGEVEKRKHAIEEAKAQARGLLPGGTQVLDGTSGFSPAPKLVESPKEGKGSKPSPLSVKNTKRRLEGAKKAKADSPVNGLPKGRESRSRSRSREQSYSRSPSRSASPKRRKSDSGSTSGGSKSQSRSRSRSDSPPRQAPRSAPYKGSEIRGSRKSKDCKYPQKPHKSRSRSSSRSRSRSRERADNPGKYKKKSHYYRDQRRERSRSYERTGRRYERDHPGHSRHRR |
1 | 3javA | 0.07 | 0.05 | 1.99 | 0.67 | DEthreader | | -G------------L-KLCNRLLLLHLKVLFMKLKGDVVEPVSPAEVRD--------------------------EVVFSKPNRERQMRIQIFLRHSQQDYRKNQ--------------LAEDTITALLNNRKLLEKHITAAE-DT---------------------VSLVRKNRPLELICKAVLNLVFWRDSNKEIRSKSVRELAQ-------RD-LSYYRYQN-AR-----P---------R--QT-EF----------------DKEKNKLTFEVVARLILRLTKILLLDILVRLVDG-FICKLIKHTKQ-LCKVLQTLRE---DVFHESILLAIALGFKYDRKVAQQEKATVTVNTSDLGNKK-KAKDDL---LGLLGLYINVITL-NCIATHES--------------S--AEILHNKELMLGQIEIVRLYTTERDEQGSFFL-KSVTRNGIILTAALAILVLFVGFFKDEPLFARVIYDLLFFFVIIIVLNLIFGVIIDT-------------- |
2 | 6cnbR | 0.10 | 0.08 | 2.86 | 1.42 | EigenThreader | | --------------------------MPVCKNCHGTELSNANNDLVCKACGVVSED----NPIVS--EVALESREATLNNARRKLRAVSYALHIPEYITDAAFQWYKLALANNFVQGRRSQNVIASCLYVACRKEKTHHMLIDFSS-------------RLQVSVYSIGATFLKMVKKL--------HITELPLADPSLFIQHFAEKLDLADIKVVKDAVKLAQRMSKDWMFEGRRPAGIAGACILLACRMNNLRRTH-TEIVAVSHVAEETLQQRLNEFKN-------------------------------------------TKAAKLSVQKFRENDVEDGEARPPSFVKNRKKE------------------SGIVPGCRLDLKTVALHARNAEYKRMRIREPKTTALIFASGKYARIIQKIGFAAKFKFPIRLEGLAFSHGTFSEPELFPGKPKVSGQREEIYQAFEAIYPVLSEFRKMSGSPRNLHLLPTTDTYLSKVSDDPDNLEDVDDEELN |
3 | 7jv7B | 0.16 | 0.09 | 3.01 | 1.38 | SPARKS-K | | ------------------------------------------FESQLFFSRPFLSKRQIQRAQK-NTISDYRNYNQKKLAVFKFLSDLCVQLKFPRKTLETAVYFYQRYHLFNRFETEVCYTVATSCLTLGCKEVETIKKTNDICTLSLRLRNVVKINT-------DILENFKKRVFQIELRILESCSFDYRVVHIDEYVIKIGRELSFDY--KLCNLAWVIAYDALKLETILVIPQHSIALAILKIAYELLDNKNW-SSKRYSLFETDEKSVNEAYFDIVNFYINS---FDMCDLQRHLGVERFMELKKNA------------GPESGLPQIPDHLLNADITRDNNVQERRLSLELINGES-------------------------------------------------------------------------------------------------------------------------------------------------------------- |
4 | 6gmhQ | 0.08 | 0.07 | 2.95 | 1.12 | EigenThreader | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG------GGGGGGGGGGGGGGGGGVEESCYQLARSFHVQYYQATQFASSFVLPFFGLGQMYIYRG--------DKENASQCFEKVLKAYPNNYETMKILGSLYAASEHLKKVTEQYPDDVEAWIELAQILEQTAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYFLASLDRAKAEAEHDEHYYNAISVTTSYNLARLYEAMCELYKNILREHPNY---VDCYLRLGAMARDKGNFYEASDWFKEALQINDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQSD-----------TYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVFAQVREA-----------TADISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLARALFKCGKLQECKQTLLKARHVAPSDTVLMFNVAL |
5 | 2i53A | 0.30 | 0.14 | 4.26 | 1.19 | MUSTER | | -----------------------------------SANLDHTK------PCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFIFDVGTRLGLHYDTLATGIIYFHRFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTARSLLNDV--------QFGQFGDDPKEEVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGDKIQKLVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMYLAGRLCKFEIQMYRRWWEQFDVPVDVLEDICHQILDLYSQGKQQMPH----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
6 | 7jv7B | 0.16 | 0.09 | 2.95 | 1.00 | MapAlign | | -----------------------------------------------------LSKRQI-QRAQKNTISDYRNYNQKKLAVFKFLSDLCVQLKFPRKTLETAVYFYQRYHLFNRFETEVCYTVATSCLTLGCKEVETIKKTNDICTLSLRLRN-------VVKINTDILENFKKRVFQIELRILESCSFVNNYVHIDEYVIKIGRELSF--DYKLCNLAWVIAYDALKLETILVIPQHSIALAILKIAYELLDNKNW-SSKRYSLFETDEKSVNEAYFDIVNFYIFDMCDLQRHLPADLLPIGVERFMELKKNAGPESGLPQIPDHLL----NADPYITITRDNNVQERRYVLSLELINGE--------------------------------------------------------------------------------------------------------------------------------------------------------------- |
7 | 7jv7B | 0.15 | 0.09 | 2.93 | 0.46 | CEthreader | | ------------------------------------------FESQLFFSRPFLSKRQIQRAQK-NTISDYRNYNQKKLAVFKFLSDLCVQLKFPRKTLETAVYFYQRYHLFNRFETEVCYTVATSCLTLGCKEVETIKKTNDICTLSLRLRN-------VVKINTDILENFKKRVFQIELRILESCSFDYRVVHIDEYVIKIGRELSF--DYKLCNLAWVIAYDALKLETILVIPQHSIALAILKIAYELLDNKNWS-SKRYSLFETDEKSVNEAYFDIVNFYINSFDMCDLQRHLPADLLPIGVERFMELKKNAGPESGLPQIPDHLLNADPYITITRDNNVQERRYVLSLELINGES---------------------------------------------------------------------------------------------------------------------------------------------------------------- |
8 | 2i53A | 0.31 | 0.14 | 4.36 | 2.35 | HHsearch | | -----------------------------------------SANLDHTKPCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFIFDVGTRLGLHYDTLATGIIYFHRFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTARSLLNDVQ--------FGQFGDDPKEEVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNQKLVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMYLAGRLCKFEIQEYRRWWEQFDVPVDVLEDICHQILDLYSQGKQQMPH----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
9 | 2i53A | 0.31 | 0.14 | 4.30 | 1.86 | FFAS-3D | | ------------------------------------------ANLDHTKPCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFIFDVGTRLGLHYDTLATGIIYFHRFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTARSLL--------NDVQFGQFGDDPKEEVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNQKLVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMYLAGRLCKFEIQMYRRWWEQFDVPVDVLEDICHQILDLYSQGKQQ-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
10 | 2ivxA | 0.27 | 0.13 | 3.96 | 1.65 | CNFpred | | -----------------------------------------------ASSRWFFTREQLENTPSRRCGVEADKELSCRQQAANLIQEMGQRLNVSQLTINTAIVYMHRFYMHHSFTKFNKNIISSTALFLAAKVEEQARKLEHVIKVAHACLHP---LEPLLDTKCDAYLQQTRELVILETIMLQTLGFEITIEHPHTDVVKCTQLVR--ASKDLAQTSYFMATNSLHLTFCLQYKPTVIACVCIHLACKWSNWEIPVGKHWWEYVDVTLELLDELTHEFLQILEKTPNRLKKIRNWRANQA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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