Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300
| | | | | | | | | | | | | | | |
| SS Seq | CHHHHHHHHHHHCCCCCCCCCCCSSSSCCCHHHHHHHHHHHHHCCCSSSSSCCCCCCCCSSSSSCCCCCSSSSSCCSSSCCCCHHHHHHHHHHCCCCCCCCCCCCCCSSSSCCCCCCCCCCCHHHHHHHCCCCSSCCCHHHSSSSCCCCSSSSSSSCCCCCCCSSSSCCSSSSCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCCCSSSSSSCCCHHHHHCCCCSSSCCCCCCCCCCCCCCCCCCSSSSSSSCCCCCCHHHCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC DPDYEQLLKVVTWGLNRTLKPQRVIVVGAGVAGLVAAKVLSDAGHKVTILEADNRIGGRIFTYRDQNTGWIGELGAMRMPSSHRILHKLCQGLGLNLTKFTQYDKNSDRLQYSRIVGGWDLLPRALLSSLSGLVLLNAPVVAMTQGPHDVHVQIETSPPARNLKVLKADVVLLTASGPAVKRITFSPPLPRHMQEALRRLHVVQPPALWQTEKDDWTVPYGRIYFAGEHTAYPHGWVETAVKSALRAAIKINSRKGPASDTASPEGHASDMEGQGHVHGVASSPSHDLAKEEGSHPPVQGQLSLQNTTHTRTSH |
1 | 2iidA | 0.41 | 0.33 | 9.75 | 1.17 | DEthreader | | QNDYEEFLEIARNGLKATSNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVRTYRNEEAGWYANLGPMRLPEKHRIVREYIRKFDLRLNEFSQENKGAYEKRFDEIVDGMDKLPTAMYRDIQDKVHFNAQVIKIQQNDQKVTVVYETLS--KETPSVTADYVIVCTTSRAVRLIKFNPPLLPKKAHALRSVHYTFTPYQFQHFSDPLTASQGRIYFAGEYTAQAHGWIDSTIKSGLRAARDVNLASEN--------------------------------------------------------- |
2 | 2iidA1 | 0.41 | 0.33 | 9.75 | 1.94 | SPARKS-K | | ENDYEEFLEIARNGLKATSNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVRTYRNEEAGWYANLGPMRLPEKHRIVREYIRKFDLRLNEFSQYPVKAYEKRFDEIVDGMDKLPTAMYRDIQDKVHFNAQVIKIQQNDQKVTVVYETLSKET--PSVTADYVIVCTTSRAVRLIKFNPPLLPKKAHALRSVHYTFTPYQFQHFSDPLTASQGRIYFAGEYTAQAHGWIDSTIKSGLRAARDVNLASEN--------------------------------------------------------- |
3 | 2iidA | 0.41 | 0.33 | 9.66 | 0.66 | MapAlign | | ENDYEEFLEIARNGLKATSNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVRTYRNEEAGWYANLGPMRLPEKHRIVREYIRKFDLRLNEFSQDDIFAYEKRFDEIVDGMDKLPTAMYRDIQDKVHFNAQVIKIQQNDQKVTVVYETL--SKETPSVTADYVIVCTTSRAVRLIKFNPPLLPKKAHALRSVITTFTPYQFQHFSDPLTASQGRIYFAGEYTAQAHGWIDSTIKSGLRAARDVNLAS----------------------------------------------------------- |
4 | 2iidA1 | 0.40 | 0.33 | 9.67 | 0.67 | CEthreader | | ENDYEEFLEIARNGLKATSNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVRTYRNEEAGWYANLGPMRLPEKHRIVREYIRKFDLRLNEFSQDDIFAYEKRFDEIVDGMDKLPTAMYRDIQDKVHFNAQVIKIQQNDQKVTVVYET--LSKETPSVTADYVIVCTTSRAVRLIKFNPPLLPKKAHALRSGITTFTPYQFQHFSDPLTASQGRIYFAGEYTAQAHGWIDSTIKSGLRAARDVNLASEN--------------------------------------------------------- |
5 | 2iidA1 | 0.41 | 0.33 | 9.75 | 1.33 | MUSTER | | ENDYEEFLEIARNGLKATSNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVRTYRNEEAGWYANLGPMRLPEKHRIVREYIRKFDLRLNEFSQYPVKAYEKRFDEIVDGMDKLPTAMYRDIQDKVHFNAQVIKIQQNDQKVTVVYETLSKETP--SVTADYVIVCTTSRAVRLIKFNPPLLPKKAHALRSVHTTFTPYQFQHFSDPLTASQGRIYFAGEYTAQAHGWIDSTIKSGLRAARDVNLASEN--------------------------------------------------------- |
6 | 2iidA1 | 0.41 | 0.33 | 9.84 | 1.47 | HHsearch | | ENDYEEFLEIARNGLKATSNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVRTYRNEEAGWYANLGPMRLPEKHRIVREYIRKFDLRLNEFSQYDTYSYEKRFDEIVDGMDKLPTAMYRDIQDKVHFNAQVIKIQQNDQKVTVVYETLSK--ETPSVTADYVIVCTTSRAVRLIKFNPPLLPKKAHALRSVITTFTPYQFQHFSDPLTASQGRIYFAGEYTAQAHGWIDSTIKSGLRAARDVNLASEN--------------------------------------------------------- |
7 | 2iidA1 | 0.40 | 0.32 | 9.40 | 1.73 | FFAS-3D | | ENDYEEFLEIARNGLKATSNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVRTYRNEEAGWYANLGPMRLPEKHRIVREYIRKFDLRLNEFSQYPVKAYEKRFDEIVDGMDKLPTAMYRDIQDKVHFNAQVIKIQQNDQKVTVVYETLSKETP--SVTADYVIVCTTSRAVRLIKFNPPLLPKKAHALRSVHYRGITTFTPYQFQHFSASQGRIYFAGEYTAQAHGWIDSTIKSGLRAARDVNL------------------------------------------------------------- |
8 | 1gosA | 0.26 | 0.22 | 6.89 | 0.82 | EigenThreader | | --------------------KCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQKVKY-VDLGGSYVGPTQNRILRLAKEL-GLETYKVRIISTTNGGQERKFVGGSGQVSERIMDLLGDRVKLERPVIYIDQTRENVLVETL------NHEMYEAKYVISAIPPTLGMKIHFNPPLPMMRNQMIALEPTYFPPGILTQYGRVLRQPVDRIYFAGTETAHWSGYMEGAVEAGERAAREILHAMGKIPEDEIWQSEPESVDVP-----AQPITT-------TFLERHLPSVPGLLRLIGLTT- |
9 | 3kveA | 0.35 | 0.28 | 8.27 | 1.97 | CNFpred | | ETDYEEFLEIARNGLKKTSNPKHVVVVGAGMSGLSAAYVLAGAGHKVTVLEASERAGGRVRTHRNSKEGWYANLGPMRIPEKHRIVREYIRKFGLNLNEFSQENDNAWY-RFDEIVGGMDQLPTSMYRAIEEKVKFNARVIKIQQNANQVTVTYQTP--EKDTSSNTADYVIVCTTSRAARRIQFEPPLPPKKQHALRSVHY-CSSKFWEDDGIHGGKSTTRFIYYPNHNGVIIAYGI-CADIVFNDLSLIHQL------------------------------------------------------------ |
10 | 2yr4A | 0.20 | 0.18 | 5.59 | 1.17 | DEthreader | | YRSAVSYPVAAAAPLGRLPANYRIAIVGGGAGGIAALYELGRLAIDVQIYEADPSLAGRVSAALVHNGDTIYEVGAMRFPEIAGLTWHYASAAFAPIKVFPNPGYVGSYSNEYTLVTENVEFIRNLFLKAQVVQVRQERVANACHSTARAQLLSYDSH-NA-VHSEAYDFVILAVPHDQLTPIVRSYPLNARIVTAIGQLHMKLDMTGDHHQSNLCRYHHNRFFIASDSYSHLGGWLEGAFMSALNAVAGLIVRANDVSLTARP--IGL-R-PVVK-------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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