Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| SS Seq | CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHSCCCCCCCSSSCCHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC KGLQILGQTLRASMRELGLLIFFLFIGVVLFSSAVYFAEVDRVDSHFTSIPESFWWAVVTMTTVGYGDMAPVTVGGKIVGSLCAIAGVLTISLPVPVIVSNFSYFYHRETEGEEAGMFSHVDMQPCGPLEGKANGGLVDGEVPELPPPLWAPPGKHLVTEV |
1 | 3jycA | 0.15 | 0.12 | 3.99 | 1.00 | DEthreader | | --------VDIRWRYMLLLFSLAFLVSWLLFGLIFWLIALIHGDPQVNGFVAAFLFSIETQTTIGYGFRCVTCPLAVFMVVVQSIVGCIIDSFMIGAIMAKMARP--KKR-AQT-LLFVGNHVDTILH-EINLFGISRQDLE------------------- |
2 | 2r9rB3 | 0.86 | 0.59 | 16.61 | 1.67 | SPARKS-K | | KGLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAEADERDSQFPSIPDAFWWAVVSMTTVGYGDMVPTTIGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRET--------------------------------------------------- |
3 | 2r9rB | 0.86 | 0.58 | 16.44 | 0.63 | MapAlign | | KGLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAEADERDSQFPSIPDAFWWAVVSMTTVGYGDMVPTTIGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRE---------------------------------------------------- |
4 | 2r9rB3 | 0.86 | 0.59 | 16.61 | 0.56 | CEthreader | | KGLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAEADERDSQFPSIPDAFWWAVVSMTTVGYGDMVPTTIGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRET--------------------------------------------------- |
5 | 2r9rB | 0.86 | 0.59 | 16.61 | 1.16 | MUSTER | | KGLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAEADERDSQFPSIPDAFWWAVVSMTTVGYGDMVPTTIGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRET--------------------------------------------------- |
6 | 4chvA1 | 0.24 | 0.21 | 6.57 | 1.56 | HHsearch | | TFFPVLGRVLANEARNLIGVTTLFGVVLFAVALAAYVIERDIQPEKFGSIPQAMWWAVVTLSTTGYGDTIPQSFAGRVLAGAVMMSGIGIFGLWAGILATGFYQEVRRGDFVRNWQLVAAVP--LFQKLGPAVLVEIVR----AL---------------- |
7 | 2r9rB3 | 0.86 | 0.59 | 16.61 | 1.88 | FFAS-3D | | KGLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAEADERDSQFPSIPDAFWWAVVSMTTVGYGDMVPTTIGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRET--------------------------------------------------- |
8 | 5twvA | 0.11 | 0.11 | 4.01 | 1.10 | EigenThreader | | QGRFLQDVFTTLVDLTLLIFTMSFLCSWLLFAMVWWLIAFVPCVTSIHSFSSAFLFSIEVQVTIGFGGRMVTCPLAILILIVQNIVGLMINAIMLGCIFMKTAQAHRRAETI--TPRHGRKSMTTSPEGEVVPLPMENGVGGNSIFLVALAPSDLHHHQDL |
9 | 3lnmB | 0.86 | 0.59 | 16.61 | 0.86 | CNFpred | | KGLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAEADERDSQFPSIPDAFWWAVVSMTTVGYGDMVPTTIGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRET--------------------------------------------------- |
10 | 6v1xA | 0.10 | 0.08 | 3.02 | 1.00 | DEthreader | | -------I-FNYFWIRCTKLISVTLFAIHCAGCFNYLIADRYNPRWIFRYVTALYWSITTLTTTGYGDFHAENPREMLFDIFFMMFNLGLTAYLIGNMTNLVVHWTSRTTFEGLKQQEDEY-DRISRTSLMMHAHADDGRVMN-FM--------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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