Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| SS Seq | CCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC LPRRAFARQLWLLFEFPESSQAARVLAVVSVLVILVSIVVFCLETLPDFRDDRDGTGLAAAAAAGPFPAPLNGSSQMPGNPPRLPFNDPFFVVETLCICWFSFELLVRLLVCPSKAIFFKNVMNLIDFVAILPYFVALGTELARQRGVGQQAMSLAILRVIRLVRVFRIFKLSRHS |
1 | 2r9rB | 0.48 | 0.42 | 12.23 | 1.17 | DEthreader | | LPENEFQRQVWLLFEYPESSGPARIIAIVSVMVILISIVSFCLETLPFRDENDMHGG------------------GV-TFHTQYQSTDPFFIVETLCIIWFSFEFLVRFFACPSKAGFFTNIMNIIDIVAIIPYYVTIFLTESN-KSQFQRRVVQIFRIMRI-LRIFKLSRHSLQI |
2 | 2r9rB2 | 0.52 | 0.47 | 13.65 | 2.14 | SPARKS-K | | LPENEFQRQVWLLFEYPESSGPARIIAIVSVMVILISIVSFCLETLPIFRDENEDMTFHTYSQSTIGYQQSTSFT------------DPFFIVETLCIIWFSFEFLVRFFACPSKAGFFTNIMNIIDIVAIIPYYVTIFLTES--NKSVLQFQVRRVVQIFRIMRILRIFKLSRH- |
3 | 2r9rB | 0.48 | 0.44 | 12.89 | 0.79 | MapAlign | | ------QRQVWLLFEYPESSGPARIIAIVSVMVILISIVSFCLETLPIFR-------DENEDMHGGGVTFHTYSQSTIGYQQSTSFTDPFFIVETLCIIWFSFEFLVRFFACPSKAGFFTNIMNIIDIVAIIPYYVTIFLTENKSVLQFNVRRVVQIFRIMRILRIFKLSRHSKGL |
4 | 2r9rB2 | 0.51 | 0.49 | 14.14 | 0.62 | CEthreader | | LPENEFQRQVWLLFEYPESSGPARIIAIVSVMVILISIVSFCLETLPIFRDE-------NEDMHGGGVTFHTYSQSTIGYQQSTSFTDPFFIVETLCIIWFSFEFLVRFFACPSKAGFFTNIMNIIDIVAIIPYYVTIFLTESNKSVLQF-QNVRRVVQIFRIMRILRIFKLSRH- |
5 | 2r9rB2 | 0.51 | 0.49 | 14.14 | 2.12 | MUSTER | | LPENEFQRQVWLLFEYPESSGPARIIAIVSVMVILISIVSFCLETLPIFRDENEDMHGGGVTFH-------TYSQSTIGYQQSTSFTDPFFIVETLCIIWFSFEFLVRFFACPSKAGFFTNIMNIIDIVAIIPYYVTIFLTESNKSVL-QFQNVRRVVQIFRIMRILRIFKLSRH- |
6 | 2r9rB | 0.52 | 0.50 | 14.45 | 1.69 | HHsearch | | LPENEFQRQVWLLFEYPESSGPARIIAIVSVMVILISIVSFCLETLPIFRDENEDMHGGG--VTFH-----TYSQSTIGYQQSTSFTDPFFIVETLCIIWFSFEFLVRFFACPSKAGFFTNIMNIIDIVAIIPYYVTIFLTESNKS-VLQFQNVRRVVQIFRIMRILRIFKLSRHS |
7 | 2r9rB2 | 0.53 | 0.50 | 14.45 | 2.57 | FFAS-3D | | LPENEFQRQVWLLFEYPESSGPARIIAIVSVMVILISIVSFCLETLPIFRDENED-------MHGGGVTFHTYSQSTIGYQQSTSFTDPFFIVETLCIIWFSFEFLVRFFACPSKAGFFTNIMNIIDIVAIIPYYVTIFLTE-SNKSVLQFQNVRRVVQIFRIMRILRIFKLSRH- |
8 | 2r9rB2 | 0.47 | 0.43 | 12.42 | 0.98 | EigenThreader | | LPENEFQRQVWLLFEYPESSGPARIIAIVSVMVILISIVSFCLETLPIFRDENEDMHGGGVTFHTYSQSTIGY-------QQSTSFTDPFFIVETLCIIWFSFEFLVRFFACPSKAG----FMNIIDIVAIIPYYVTIFLTESNVLQFQNVRRVVQIFRIMRILRIFKLSRH---- |
9 | 5wieB | 0.53 | 0.51 | 14.61 | 1.06 | CNFpred | | LPENEFQRQVWLLFEYPESSGPARIIAIVSVMVILISIVSFCLETLPIFRD-------ENEDMHGGGVTFHTYSQSTIGYQQSTSFTDPFFIVETLCIIWFSFEFLVRFFACPSKAGFFTNIMNIIDIVAIIPYYVTIFLTESNK-SVLQFQNVRRVVQIFRIMRILRIFKLSRHS |
10 | 2r9rB2 | 0.50 | 0.44 | 12.69 | 1.17 | DEthreader | | LPENEFQRQVWLLFEYPESSGPARIIAIVSVMVILISIVSFCLETLFRDENEDMHGG------------------GVT-FHTQQQSTDPFFIVETLCIIWFSFEFLVRFFACPSKAGFFTNIMNIIDIVAIIPYYVTIFLTESN-KSVQFQNVRRVVQIFRI-MRILRIFKL-SRH |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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