Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300
| | | | | | | | | | | | | | | |
| SS Seq | CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHCHHHHHHHHCHHHHHHHHHHHHHHCHHHHHCHHHHHHHHHCHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCC GIYQKAFEHLGNALTYDPTNYKAILAAGSMMQTHGDFDVALTKYRVVACAVPESPPLWNNIGMCFFGKKKYVAAISCLKRANYLAPFDWKILYNLGLVHLTMQQYASAFHFLSAAINFQPKMGELYMLLAVALTNLEDIENAKRAYAEAVHLDKCNPLVNLNYAVLLYNQGEKKNALAQYQEMEKKVSLLKDNSSLEFDSEMVEMAQKLGAALQVGEALVWTKPVKDPKSKHQTTSTSKPASFQQPLGSNQALGQAMSSAAAYRTLPSGAGGTSQFTKPPSLPLEPEPAVESSPTETSEQIREK |
1 | 1w3bA | 0.18 | 0.14 | 4.60 | 1.17 | DEthreader | | GDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALR-L--------------CPTH-ADSLNNLANIKREQG-------------N-IEEAVRLYRKALEVF--PEF--A--------------EAMHYAIIS-TFAD----------------- |
2 | 2xpiA | 0.13 | 0.12 | 4.01 | 1.72 | SPARKS-K | | SRFIDVLAITTKILEIDPYNLDVYPLHLASLHESGEKNKLYLISNDLVDRHPEKAVTWLAVGIYYLCVNKISEARRYFSKSSTMDPQFGPAWIGFAHSFAIEGEHDQAISAYTTAARLFQGTHLPYLFLGMQHMQLGNILLANEYLQSSYALFQYDPLLLNELGVVAFNKSDMQTAINHFQNALLLVKKTQSNE-----KPWAATWANLGHAYRKLK-----MYDAAIDALNQGLLLTNDANVHTAIALVYLHKIPGLAITHLHESLAISPNEIMASDLLKRALE------------------- |
3 | 4a1sA | 0.16 | 0.14 | 4.79 | 0.61 | MapAlign | | --CRAGVAFFQAAIQALRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLARLEAKSSGNLGNTLKVMGRFDEAAICCERHLTLALSEGRALYNLGNVYHAKGALTRAVEFYQENLKLMRGAGRACGNLGNTYYLLGDFQAAIEHHQERLRIARAARRANSNLGNSHIFLGQFEDAAEHYKRTLALAVELG------EREVEAQSCYSLGNTYTLLHEFAIEYHNRHLAIAQELGDRIGEARACWSLGNAHSHERALKYAEQHLQLAGGGGGGGGG---------------------------- |
4 | 4a1sA | 0.15 | 0.14 | 4.65 | 0.38 | CEthreader | | GDCRAGVAFFQAAIQAGTEDSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLALGEAKSSGNLGNTLKVMGRFDEAAICCERHLTLALSEGRALYNLGNVYHAKGKLTRAVEFYQENLKLMGAQGRACGNLGNTYYLLGDFQAAIEHHQERLRIAREFRRANSNLGNSHIFLGQFEDAAEHYKRTLALAVELG------EREVEAQSCYSLGNTYTLLHEFNIEYHNRHLAIAQELGDRIGEARACWSLGNAHSAGGHERALKYAEQHLQLAGGGGGGGGGGGGGGGG------------------ |
5 | 4kvmA1 | 0.16 | 0.14 | 4.68 | 1.29 | MUSTER | | KQYKKGLKAIEPLLERHPEHGESLAIKGILLHSLGNTKEGYDNVRLGLRNDVGSGVCWHIFGLISRADKDYVQAAKCYINAHKLEKNNSSLLRDLALLQSQLRQYKALADTRNALLQDNPGVRANWSALAVAQFLRGEYASAYKIVDAFESTTQEESEAMLFMNLVILKKDGVEDAYKHLLSIEKKV---LDRVAFLET-EYELYLSKMEEAKSTIYLLLDRNPDNHQYYYNLQRAYGYEDASGKV-------LDSAEWLNLYSQLAKRYPKS------------------------------- |
6 | 6tntJ | 0.13 | 0.12 | 3.98 | 0.78 | HHsearch | | CDFKMCYKLTSVVMEKDPFHASCLPVHIGTLVELNKANELFYLSHKLVDLYPSNPVSWFAVGCYYLMVGKNEHARRYLSKATTLEKTYGPAWIAYGHSFAVESEHDQAMAAYFTAAQLMKGCHLPMLYIGLEYGLTNNSKLAERFFSQALSIAPEDPFVMHEVGVVAFQNGEWKTAEKWFLD------------ALEKIKAIEPLLNNLGHVCRKLK-----KYAEALDYHRQALLIPQNASTYSAIGYISLMGNFENAVDYFHTALGLRRDDTMYIGDSEAY--------------------- |
7 | 2q7fA | 0.15 | 0.10 | 3.21 | 2.37 | FFAS-3D | | -----AAEAFTKAIEENKEDAIPYINFANLLSSVNELERALAFYDKALELDSSAATAYYGAGNVYVVKEMYKEAKDMFEKALRAGMENGDLFYMLGTVLVKLEQPKLALPYLQRAVELNENDTEARFQFGMCLANEGMLDEALSQFAAVTEQDPGHADAFYNAGVTYAYKENREKALEMLDKAID------------IQPDHMLALHAKK---------------------------------------------------------------------------------------------- |
8 | 1w3bA | 0.14 | 0.13 | 4.60 | 0.80 | EigenThreader | | GDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLD----------PNF---LDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHGSVAEAEDCYNTALRLCDSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKL |
9 | 4ui9J | 0.13 | 0.11 | 3.90 | 1.65 | CNFpred | | CDFKMCYKLTSVVMEKDPFHASCLPVHIGTLVELNKANELFYLSHKLVDLYPSNPVSWFAVGCYYLMVHKNEHARRYLSKATTLEKTYGPAWIAYGHSFAVESEHDQAMAAYFTAAQLMKGCHLPMLYIGLEYGLTNNSKLAERFFSQALSIAPEDPFVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTV---DKWEPLLNNLGHVCRKLKKYA-----EALDYHRQALVLPQNASTYSAIGYIHSLGNFENAVDYFHTALGLRRDDTFSV--------------------------- |
10 | 5dseA | 0.14 | 0.12 | 4.03 | 1.17 | DEthreader | | LKSARAVKVLKECIRLKPDDATIPLLAAKLCMGLHWLEEAEKFAKTVV-TSEFKAKGYLALGLTYSLQALQRKALLAFQRAHSLSPTDHQAAFYLALQLAISRQIPEALGYVRQALQLQGDDANSLHLLALLLSAQKHYHDALNIIDMALSEYPENFILLFSKVKLQSLCRGPDEALLTCKHMLQIWKSCY----LHPWMTLAQIWLHAAEVYIG-IG-------------------KPAEATACT--A-----FPMSHNVLYMR------R-EAWYKSQR-TAHEWNGDAAA----------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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