Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300
| | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCSSCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCSSSSCHHHHHHHHHHHHCHHHSSSSCCCCCCCCCCCSSSSSSCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHCCCCCC MERDKPVSVSEFLLLGLSRQPQQQHLLFVFFLSMYLATVLGNLLIILAISIDSRLHTPMYFFLSNMSFVDNCFSTTVPKMLANHILRTQTISFSGCLMQMYFISELADMDNFLLAVMAYDRFVAVCRPLHYTAKMIHQLCALLVTGSWVVANSNALLHTLLMARLSFCADNTIPHIFCDVTPLLKLSCSDTHLSEVMILTEAALVTITPFLCLLASYMHITCVVLRVPSTKGRWKAFSTCGSHLAVVLLFYGTIMSPYFRTSSSHSAQRDIAAAVRFTVVTPVMNPLIYSLRNKDIKGALVKVVAVKFFSVQ |
1 | 4zwjA | 0.16 | 0.15 | 5.12 | 1.33 | DEthreader | | DA-EGPNFSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGFTSTLYTSLHGYFVFGPTGCNLQGFFATLGGEIALWSLVVLAIERYVVVCKP-MSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPE----GLQCSCGID-YYT-L-KPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAQQSATTQKAEKEVTRMVIIYVIAFLICWVPYASVAISCFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKN--- |
2 | 4n6hA2 | 0.14 | 0.13 | 4.47 | 2.18 | SPARKS-K | | -----------SPGARSASSLALAIAITALYSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALATSTLPFQSAKYLMETWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPAKAKLINICIWVLASGVGVPIMVMAVTRPRDG---------AVVCMLQFPSPSWYWDTVTKICVFLFAFVVPILIITVCYGLMLLRLRSVSGSKEKDRSLRRITRMVLVVVGAFVVCWAPIHIFVIVWTVVAALHLCIALGYANSSLNPVLYAFLDENFKRCFRQLCRKPCG--- |
3 | 3dqbA | 0.17 | 0.16 | 5.17 | 0.66 | MapAlign | | ---TGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCK--PMSNFFGENHAIMGVAFTWVMALACAAPPLWSRYIP------EGMQCSCGI--DYYTPHEET-NNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVFGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTL-------- |
4 | 3dqbA | 0.17 | 0.16 | 5.29 | 0.39 | CEthreader | | SNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSN-FRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPE----GMQCSCG---IDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAASATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKN--- |
5 | 1f88A | 0.16 | 0.16 | 5.21 | 1.42 | MUSTER | | SNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNF-RFGENHAIMGVAFTWVMALACAAPPLVG----WSRYIPEGMQCSCGIDYY---TPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAASATTQKAEKEVTRMVIIMVIAFLICWLPYAGVQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPST |
6 | 6kp6A | 0.17 | 0.15 | 4.95 | 1.32 | HHsearch | | --------------------TVEMVFIATVTGSLSLVTVVGNILVMLSIKVNRQLQTVNNYFLFSLACADLIIGFSMNLYTVYTIKGYWPLGAVVCDLWLALDYVVSNASVMNLLIISFDRYFCVTKPLTYPARRTTKMAALMIAAAWVLSFVLWAPAILFWQFVVGKRT--VPDNQCFAQF---------LSNPAVTFGTAIAAFYLPVVIMTVLYIHIYLASRSRVHGSQMAARERKVTRTIFAILLAFILTWTPYNVMVLSCIPDTVWSIGYWLCYVNSTIRPACYALCNAEFKKTFRHLLLCQ----- |
7 | 3emlA1 | 0.17 | 0.15 | 4.87 | 2.24 | FFAS-3D | | -----------------------SSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAIT-ISTGFCAACHGCLFIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQSQGCGEGQVACLFEDVVPMN---------YMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLR-- |
8 | 3capA | 0.16 | 0.15 | 5.12 | 0.97 | EigenThreader | | SNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKP-MSNFRFGENHAIMGVAFTWVMALACAAPPLV----GWSRYGMQCSCGIDYYTPH--EETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCC---GKN |
9 | 4n6hA | 0.14 | 0.13 | 4.35 | 1.74 | CNFpred | | ---------------------ALAIAITALYSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALATSTLPFQSAKYLMETWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPAKAKLINICIWVLASGVGVPIMVMAVTRPR-----DGAVVCMLQFPS----PSWYWDTVTKICVFLFAFVVPILIITVCYGLMLLRLRSVRLSKEKDRSLRRITRMVLVVVGAFVVCWAPIHIFVI-PLVVAALHLCIALGYANSSLNPVLYAFLDENFKRCFRQLCRKPCG--- |
10 | 3capA | 0.16 | 0.16 | 5.20 | 1.33 | DEthreader | | GTEGPNF-SPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSN-FRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPE----GMQCSCGID-YYT-P-HEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAQSATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAISDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKN--- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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