Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280
| | | | | | | | | | | | | | |
| SS Seq | CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHSCCCCSSSSCCCCCCCCHHHHHHHHCHHSCCCCCCCCCCCCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCCSSSSSSSCCCCCCCCCCCCSSSSSSCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC MSLAHTAAEYMLSDALLPDRRGPRLKGLRLELPLDRIVKFVAVGSPLLLMSLAFAQEFSSGSPISCFSPSNFSIRQAAYVDSSCWDSLLHHKQDGPGQDKMKSLWPHKALPYSLLALALLMYLPVLLWQYAAVPALSSDLLFIISELDKSYNRSIRLVQHMLKIRQKSSDPYVFWNELEKARKERYFEFPLLERYLACKQRSHSLVATYLLRNSLLLIFTSATYLYLGHFHLDVFFQEEFSCSIKTGLLSDETHVPNLITCRLTSLSIFQIVSLSSVAIYTILVPVIIYNLTRLCRWD |
1 | 6m02A | 0.39 | 0.31 | 9.03 | 1.00 | DEthreader | | -----------------K---------LRLELAVDKMVTCIAVGLPLLLISLAFAQEISIGTQISCFS---PSSFSWRQAAFVDSYCWAAVQ------KNSL-LWLHKFFPYILLLFAILLYLPPLFWRFAAAPHICSDLKFIMEELDKVYNRAIKAAKSARD-----------------------FKYPIVEQYLKTKKNSNNLIIKYISCRLLTLIIILLACIYLGY-YFSLSSL-SDEFVCSIKL-DS--TVPDQFQCKLIAVGIFQLLSVINLVVYVLLAPVVVYTLFVPFRQS |
2 | 6vd7A | 0.45 | 0.37 | 10.69 | 2.49 | SPARKS-K | | ----------VFSDFLLKDPPESKYKGLRLELAVDKLVSCIAVGLPLLLISLAFAQEITLGSQISCFAPTSFSWRQAAYVDSFCWAAVPL--------------WLHKFFPYILLLVAVLLYLPNLFWRFTAAPHLSSDLKFVMEELDKCYNRDI-----------KRDYP-IVEQYLKTKNNSY------------------GLIIKYLICRVVTLIIVFTACIYLGYYISLFSLTDEFTCNIRTGILRNDTALPPLVQCKLIAVGVFRLLSYINLIIYVLIMPFIIYAMLVPFRKT |
3 | 5h1qA | 0.13 | 0.11 | 3.96 | 1.18 | MapAlign | | ---NSVNALISRVFVQ-----------PKGDLADRL-NSRVTVVILAVSSALLLSSH---FDPITCWTPAQFNAQWVNFVNQYCFVHGTYFVAFEEEERTKVSIQYYQWVPYVFALQAFLFYIPRFIWKAMIAYSGYDLA--------AAVKYVDRFWSENRDKDDKFKTRLAAFEGRPSV------YIWDGIRLA-RKKRSRNMALFYTLSTVWQAVNAWIQFYILTQLLWGPSILGDRIVHCDFNRRRPASVQLDTVLCVLTLNIYYEKLFIFLWFWLVFVAVVSTVNCFKWI--- |
4 | 5h1qA | 0.16 | 0.14 | 4.69 | 0.95 | CEthreader | | -------------AINSVNALISRVFVQPKGDLADRLNSRVTVVILAVSSALLLSSHF---DPITCWTPAQFNAQWVNFVNQYCFVHGTYFLAFEEEERTKVSIQYYQWVPYVFALQAFLFYIPRFIWKAM-IAYSGYDLAAAVKYVDRFWSEN--------------RDKDDKFKTRLAAFEGRPSVYIWDGIRLARKKRSRNMALFYTLSTVWQAVNAWIQFYILTQLLGPSILGDLLHCDFNRRRPASVQ--LDTVLCVLTLNIYYEKLFIFLWFWLVFVAVVSTVNCFKWIYYL |
5 | 5h1qA | 0.15 | 0.13 | 4.39 | 1.09 | MUSTER | | -AI--------VNALI------SRVFVQPKGDLADRLNSRVTVVILAVSSALLLSSH----DPITCWTPAQFNAQWVNFVNQYCFVHGTYFVPFEEEERTKVSIQYYQWVPYVFALQAFLFYIPRFIWKAMIA-YSGYDLAAAVKYVDRFWSENRDKDDKF---------KTRLAAFEGRPSV-----YIWDGIRLARKKRSRNMALFYTLSTVWQAVNAWIQFYILTQLLGPSILGDLLQ----GNDWQTTGHFPRIVHCDFNRRRPASV----LDTVLCVLTLNIYYEKLFIFLWF |
6 | 6m02A | 0.45 | 0.40 | 11.66 | 6.56 | HHsearch | | ------ATEYVFSDFLLKE-----FKGLRLELAVDKMVTCIAVGLPLLLISLAFAQEISIGTQISCFSPSSFSWRQAAFVDSYCWAA----VQQKNSESGNLPLWLHKFFPYILLLFAILLYLPPLFWRFAAAPHICSDLKFIMEELDKVYNR---------AIK--A--AKSARD------SESHFKYPIVEQYLKTKKNSNNLIIKYISCRLLTLIIILLACIYLGYYFSLSSLSDEFVCSIKSGILRNDS--TVQFQCKLIAVGIFQLLSVINLVVYVLLAPVVVYTLFVPFRQK |
7 | 6m02A | 0.43 | 0.38 | 11.21 | 2.41 | FFAS-3D | | ------ATEYVFSDFLLK-----EFKGLRLELAVDKMVTCIAVGLPLLLISLAFAQEISIGTQISCFSPSSFSWRQAAFVDSYCWAAVQQKNSL-QSESGNLPLWLHKFFPYILLLFAILLYLPPLFWRFAAAPHICSDLKFIMEELDKVYNRAIKAAKSARD-------------------SESHFKYPIVEQYLKTKKNSNNLIIKYISCRLLTLIIILLACIYLGYYFSLSSLSDEFVCSIKSGILRNDSTVPDQFQCKLIAVG---IFQLLSVINLVVYVLLAPVVVPFRQKT- |
8 | 6m02A | 0.33 | 0.26 | 7.85 | 1.03 | EigenThreader | | EYVF-------------SDFLLKEFKGLRLELAVDKMVTCIAVGLPLLLISLAFAQEISIGTQISCFSSWRQAAFVDSYCWAAVNSLQSES---------GNLPLWLHKFPYILLLFAILLYLPPLFWRFAAAPHICSDLKFIMEELDKVYNRAIKSARD-------SESH-------FVEQYLKTKKNSN------NLIIKY------ISCRLLTLIIILLACIYLGYYFSL--------SSLVCSIKSGILRDQFQCKLA---VGIFQLLSVINLVVYVLLAPVVVYTL-----FV |
9 | 6m02A | 0.45 | 0.40 | 11.67 | 1.73 | CNFpred | | --------EYVFSDFLLKE-----FKGLRLELAVDKMVTCIAVGLPLLLISLAFAQEISIGTQISCFSPSSFSWRQAAFVDSYCWAAVQQKN-SLQSESGNLPLWLHKFFPYILLLFAILLYLPPLFWRFAAAPHICSDLKFIMEELDKVYNRAIKAAKSARD--------------------ESHFKYPIVEQYLKTKKNSNNLIIKYISCRLLTLIIILLACIYLGYYFSLSSLSDEFVCSIKSGILRNDSTVPDQFQCKLIAVGIFQLLSVINLVVYVLLAPVVVYTLFVPFRQK |
10 | 6vd7A | 0.36 | 0.27 | 8.08 | 1.00 | DEthreader | | --------------KY-----------LRLELAVDKLVSCIAVGLPLLLISLAFAQEI-TLGSQISCFA--PT-SFSWRQAAYVDSFCWAA------------LWLHKFFPYILLLVAVLLYLPNLFWRFTAAPHLSSDLKFVMEELDKCYNRDI---K---------------------------RDYPIVEQYLKTKNNSYGLIIKYLICRVVTLIIVFTACIYLGY-YISLFSL-TDEFTCNIRL-DT--ALPPLVQCKLIAVGVFRLLSYINLIIYVLIMPFIIYAMLVPFRKS |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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