Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440
| | | | | | | | | | | | | | | | | | | | | | |
| SS Seq | CHHHHHHHHHHHHHHHHHCCHHHHHHCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHSSCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCSSSSCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC QDKLLLSACHLLVSLATTVRPVFLISIPAVQKVFNRITDASALRLVDKAQVLVCRALSNILLLPWPNLPENEQQWPVRSINHASLISALSRDYRNLKPSAVAPQRKMPLDDTKLIIHQTLSVLEDIVENISGESTKSRQICYQSLQESVQVSLALFPAFIHQSDVTDEMLSFFLTLFRGLRVQMGVPFTEQIIQTFLNMFTREQLAESILHEGSTGCRVVEKFLKILQVVVQEPGQVFKPFLPSIIALCMEQVYPIIAERPSPDVKAELFELLFRTLHHNWRYFFKSTVLASVQRGIAEEQMENEPQFSAIMQAFGQSFLQPDIHLFKQNLFYLETLNTKQKLYHKKIFRTAMLFQFVNVLLQVLVHKSHDLLQEEIGIAIYNMASVDFDGFFAAFLPEFLTSCDGVDANQKSVLGRNFKMDRDLPSFTQNVHRLVNDLRYYRLCNDSLPPGTVKL |
1 | 5dlqB | 0.11 | 0.09 | 3.40 | 1.17 | DEthreader | | IVISNLSTVQLLVTLVERERANLVIQCENWWNLAKQFASRSPPLNFLSVQRTLMKALVLGGFAH--------MDTETKQQYWTEVLQPLQQRFLRVIQNFQQ-MC-QQE-EVKQEITATLEALCGIAEAT-QID--NVAILFNFLMDFLNNCIGLMEVYKNTPETVNLIIEVFVEVAHKQIYLGKAMHLYEACLTLLQVYSKNNLGRQRIDAEEEQYQDLLLIMELLTNLLSK--VSAADVVLYGVNLIL-PLM-SQDLLKFPTLCNQYYKLITFICEIFPEKI-----------------PQLPELFKSLMYSLELGMTSMSSEVCQLCLEALT-P-----LA-E-L--FLATRHFLKLVFDMLVLQ-NT-EMTTAAGEAFYTLVCLYQAEYSELVETLLS---SQQDPVIYQLADAFNTASAFKSLEEFMANVGGL-L---------------- |
2 | 5dlqB | 0.12 | 0.11 | 3.71 | 1.46 | SPARKS-K | | EQDLANDTVQLLVTLVERERANLVIQCENWWNLAKQFASRPLNFLSSPVQRTLMKALVLGGFAHMDT--------ETKQQYWTEVLQPLQQRFLRVINQE-NFQQMCQQEEVKQEITATLEALCGIAEATQID---NVAILFNFLMDFLNNCIGLMEVYKNTPETVNLIIEVFVEVAHKQICYLGESKAMHLYEACLTLLQVYSKNNLGRTAEEEQYQDLLLIMELLTNLLSK-VSAA-----DVVLYGVNLILPLMSQDKFPTLCNQYYKLITFICEIFPEKI----------------PQLPEDLFKSLMYSLELGMTSMSSEVCQLCLEALTPLAE----------LFLATRHFLKLVFDMLVLQN-TEMTTAAGEAFYTLVCLY-QAEYSELVETLLSSQQ--DPVIYQRLADAFNKRKQKMAFLKSLEEFMANVGGLL------------- |
3 | 3m1iC | 0.12 | 0.11 | 3.88 | 0.76 | MapAlign | | -EGVQDMACDTFIKIVQ-KCKYHFVSEPFIQTIIRDIQ-KTTADLQPQQVHTFYKACGIIISEE--------RSVAERNRLLSDLMQLPNMAWDTIVEQSTANPTLLLDSETVKIIANIIKTNVAVCTSMGADFYPQLGHIYYNMLQLYRAVSSMISAQVTKTPKVRGLRTIKLKLVETYISKANLDDVVKLVEPLLNAV----LEDYMN----NVPDARAEVLNCMTTVVEKVGHMIPQGVILILQSVFECTLDMINKDFYPEHRVEFYKLLKVINEKSFAAFL----------------ELPPAAFKLFVDAICWAFKHNNRDVEVNGLQIALDLVKNIEVPFANEFHKNYFFIFVSETFFVLTDSDHKSGFSKQALLLMKLISLLQVYLSQYLANMLSNAFPHLTSEQIASFLSALTKQYKLVVFKGTLRDFLVQIKEVGGDPTDYLFAED-- |
4 | 5dlqB | 0.11 | 0.10 | 3.61 | 0.54 | CEthreader | | EQDLANDTVQLLVTLVERRRANLVIQCENWWNLAKQFASRSPNFLSSPVQRTLMKALVLGGFA--------HMDTETKQQYWTEVLQPLQQRFLRVINQENFQQMCQ-QEEVKQEITATLEALCGIAEAT---QIDNVAILFNFLMDFLNNCIGLMEVYKNTPETVNLIIEVFVEVAHKQICYLGESKAMHLYEACLTLLQVYSKNNLRQRIDVTAEEEQYQDLLLIMELLTNLLSKVSAADVVLYGVNLILPLMSQDLLKFPTLCNQYYKLITFICEIFPEKIPQ----------------LPEDLFKSLMYSLELGMTSMSSEVCQLCLEALTPLAE----------LFLATRHFLKLVFDMLVLQNTE-MTTAAGEAFYTLVCLYQAEYSELVETLLSSQQDPVIYQRLADAFNKLPDRKQKMAFLKSLEEFMANVGGLL------------- |
5 | 5dlqB | 0.13 | 0.11 | 3.95 | 1.13 | MUSTER | | EQDLANDTVQLLVTLVERRRANLVIQCENWWNLAKQFASRSLNFLSSPVQRTLMKALVLGGFAHMD--------TETKQQYWTEVLQPLQQRFLRVINQENFQQM-CQQEEVKQEITATLEALCGIAEATQIDNV---AILFNFLMDFLNNCIGLMEVYKNTPETVNLIIEVFVEVAHKQICYLGAMHLYEACLTLLQVYSKNNLGRQRIDVTEEQYQDLLLIMELLTNLLSKVSA------ADVVLYGVNLILPLMSQDKFPTLCNQYYKLITFICEIFPEKIP----------------QLPEDLFKSLMYSLELGMTSMSSEVCQLCLEALTPLAE----------LFLATRHFLKLVFDMLVLQNTE-MTTAAGEAFYTLVCLY-QAEYSELVETLLSSQQ--DPVIYQRLADAFPDRKQKMAFLKSLEEFMANVGGL------L------- |
6 | 5dlqB | 0.12 | 0.10 | 3.65 | 3.70 | HHsearch | | EQDLANDTVQLLVTLVERRRANLVIQCENWWNLAKQFASRPLNFLSSPVQRTLMKALVLGGFAH----MDT----ETKQQYWTEVLQPLQQRFLRVINQENFQQ-MCQQEEVKQEITA---TLEALCGIAEATQIDNVAILFNFLMDFLNNCIGLMEVYKNTPETVNLIIEVFVEVAHKQICYLGESKAMHLYEACLTLLQKNNLGRQRITAEEEQYQDLLLIMELLTNLLSK-V----S-AADVVLYGVNLILPLMSQDKFPTLCNQYYKLITFICEI-----FPEKIP-----------QLPEDLFKSLMYSLELGMTSMSSEVCQLCLEALTPLAELF----------LATRHFLKLVFDMLVLQNT-EMTTAAGEAFYTLVCLYQAEY-SELVETLLSSQ--QDPVIYQRLADAFNKLTQKMAFLKSLEEFMANVGGLL------------- |
7 | 5dlqB | 0.13 | 0.11 | 3.76 | 1.93 | FFAS-3D | | EQDLANDTVQLLVTLVERRRANLVIQCENWWNLAKQFASPPLNFLSSPVQRTLMKALVLGGFAHMDT--------ETKQQYWTEVLQPLQQRFLRVINQENFQQ-MCQQEEVKQEITATLEALCGIAEATQID---NVAILFNFLMDFLNNCIGLMEVYKNTPETVNLIIEVFVEVAHKQICYLGESKAMHLYEACLTLL--QVYSKNNLGRQREQYQDLLLIMELLTNLLSKVS------AADVVLYGVNLILPLMSQDKFPTLCNQYYKLITFICEIFPEKIPQL----------------PEDLFKSLMYSLELGMTSMSSEVCQLCLEALTPLAEL----------FLATRHFLKLVFDMLVLQNTEM-TTAAGEAFYTLVCLYQAEY-SELVETLLSSQQ--DPVIYQRLADAFNDRKQKMAFLKSLEEFMANVG---------------- |
8 | 2x19B2 | 0.12 | 0.10 | 3.41 | 0.90 | EigenThreader | | NPELSVSSVSTLKKICRECKYDLPPYAANIVAVSQDVLKQIHKTSQC------WLQALGFLLSAL--------QVEEILKNLHSLISPYIQQLEKLAEEIPN-------PSNKLAIVHILGLLSNLFTTLDISHHEGPNPVVVVLQQVFQLIQKVLSKWLNDAQVVEAVCAIFEKSVKTL---------------------LPQLCELGRYSTIPQASALDLTRQLVHIFAH-EPAHFPPIEALFLLVTSVTLTLFQQGPRDHPDIVDSFQLLAQALKRKPDLFLC-------ERLD----------VKAVFQCAVLALKFPEAPTVKASCGFFTELLPRCG-EVESVGKVVLLIAVLEAIGGQASRSLD-----CFADILFALNKHCFSLLSWIKEAL---QPPGFPSQKDTFSQQILRERVNKRRVKEEFTLLCRG------------------ |
9 | 3vycA | 0.13 | 0.12 | 4.10 | 1.72 | CNFpred | | HEGVQDMACDTFIKIVQKCKYHFVIQQPFIQTIIRDIQ-KTTADLQPQQVHTFYKACGIIISEE--------RSVAERNRLLSDLMQLPNMAWDTIVEQSTANPTLLLDSETVKIIANIIKTNVAVCTSMGADFYPQLGHIYYNMLQLYRAVSSMISAQV-KVRGLRTIKKEILKLVETYISKALDDVVKVLVEPLLNAVL-EDYMNNVP------DARDAEVLNCMTTVVEKVGHMIPQGVILILQSVFECTLDMINKDEYPEHRVEFYKLLKVINEKSFAAFLEL----------------PPAAFKLFVDAICWAFKHNNRDVEVNGLQIALDLVKNIERMGANEFHKNYFFIFVSETFFVLTDSDHKSGFSKQALLLMKLISLVNQVYLSQYLANMLSNAPHLTSEQIASFLSALTKQKDLVVFKGTLRDFLVQIKEVG------------- |
10 | 6q82A | 0.08 | 0.07 | 2.73 | 1.17 | DEthreader | | HTCTNEVIKTVSTLCETCREELTPY-L--H--FISFLN-TVIPDSVHFTRTKLVRSIGYVVQCQV--S----NGPEEQAKYILQLTNLLSGSIEHCLAS------SVQLQEQQDYINCLLYCISELATSLIQPLLEFQFWSDLQIRSKICTIDKVLDNSIYCK-NSAFVEIGCLIVGKGLNLEYFLKYNSEV-NFVLRHVP--NC--EL------A-TCLPYFVYLLEKLISEFRKELTQEFDFFEKILLVYYDAYIINDPD--LLQ-TIGFVNNVLDVKPGLAI----------------G-SKHWTSFILPQFLKLIPSREKFTIVAVAKFWTKLINNYLTTVRQQVSSI-GGDLVYQI-YGLFH-TQRSDLNSYTDLLRALVAKFPIEARE-WLVAVLPQI------A-GHEKFINKLITRGSAAGNVILQWWLDCTTL-------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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