Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440
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| SS Seq | CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCSCCSSCCCCCSHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCSSSCCCCCCCCCCCCCCCCCCCSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCHHHCCCCCCCCCCCCSSSSCCCSCCCCCSSSCCCCCCCHHHHHHHHHHHHCHCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCSSCC MATVQEKAAALNLSALHSPAHRPPGFSVAQKPFGATYVWSSIINTLQTQVEVKKRRHRLKRHNDCFVGSEAVDVIFSHLIQNKYFGDVDIPRAKVVRVCQALMDYKVFEAVPTKVFGKDKKPTFEDSSCSLYRFTTIPNQDSQLGKENKLYSPARYADALFKSSDIRSASLEDLWENLSLKPANSPHVNISATLSPQVINEVWQEETIGRLLQLVDLPLLDSLLKQQEAVPKIPQPKRQSTMVNSSNYLDRGILKAYSDSQEDEWLSAAIDCLEYLPDQMVVEISRSFPEQPDRTDLVKELLFDAIGRYYSSREPLLNHLSDVHNGIAELLVNGKTEIALEATQLLLKLLDFQNREEFRRLLYFMAVAANPSEFKLQKESDNRMVVKRIFSKAIVDNKNLSKGKTDLLVLFLMDHQKDVFKIPGTLHKIVSVKLMAIQNGRDPNRDAGYIYCQRI |
1 | 2ysrA | 0.24 | 0.05 | 1.71 | 1.19 | FFAS-3D | | --------------------------SSGSSGYRATKLWNEVTTSFRAGMPLRKHRQHFKKYGNCFTAGEAVDWLYDLLRNNSNFGP-EVTRQQTIQLLRKFLKNHVIEDIK----GRWGSENVDDNN-QLFRFPA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
2 | 2ysrA | 0.23 | 0.05 | 1.65 | 3.24 | HHsearch | | -------------------------GSSGSSGYRATKLWNEVTTSFRAGMPLRKHRQHFKKYGNCFTAGEAVDWLYDLLRNNSNFGP-EVTRQQTIQLLRKFLKNHVIEDIKGR----WGSENVDDN-NQLFRFPA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
3 | 3cxlA | 0.12 | 0.10 | 3.47 | 0.70 | CEthreader | | ----------------------------------------------------GVWKSYLYQLQQEAPHPRRITCTCEVENRPKYYGREFHGMISREAADQLLIVAEGSYLIRESQRQPGTYTLALRFGSQTRNFRLYYDGKHFVGEKRFESIHDLVTDGLITLYIETKAAEYIAKMTINPIYEHVGYTTLMPVLKETEKIHNFKVHTFRGPHQGVKCADCGLNVHKQCSKMVPNDCKPDLKHVKKVYSCDLTTLVKAHTTKRPMVVDMCIREIESRFSDLIEDVKMAFDRDGEKADYEDINIITGALKLYFRDLPIPLITYDAYPKFIESAKIMDPDEQLETLHEALKLLPPAHCETLRYLMAHLKRVTLHEKENL----MNAENLGIVFGPTLMRSPELDIRYQRLVVELLIKNEDILF----------------------------------- |
4 | 2pbiA | 0.10 | 0.07 | 2.80 | 0.87 | EigenThreader | | -------------------------GQQYRPRMAFLQKIEALVKDMQNGVRMHNQRVLVTSVPHAMTGGDVLQWITQRLW---------ISNLEAQNLGNFIVKYGYIYPLQD------PKNLILKPDSSLYRFQTPYFWPTQQWPAEDTDYAIYLAKRNIKKKGILEEYEKENYDFLNKKI---------NYKWDFVIMQAKEQYRTGKADRYALDCQEKAYWLVHRSPPGMNNVLDYGL-----DRVTNPNEVKKQTVTAVRKEIMYYQQALMRSTVKC--LPSNPWITDDTQFWDLNGRQSFQYFLKKEFSGENLGFWEACEDLKYGDQSKVKEKAEEIYKLFL--------------------------APGARRWINIDGKTMDITVKGLRHPHRYV--LDAAQTHIYMLMKKD-------------SYARYLKSPIYKEMLAKAIEPQ- |
5 | 1v3fA | 0.18 | 0.04 | 1.44 | 0.92 | FFAS-3D | | -----------------------------SGSSGLHRIVDKMHD-TSTGIRPSPNMEQGSTYKKTFLGSSLVDWLIS--------SNFAASRLEAVTLASMLMEENFLRPVGVRSMGAIRSGDFLDDSTALYTFAESYKKKVSSKESGPSS---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
6 | 5frpA | 0.08 | 0.07 | 2.62 | 0.86 | SPARKS-K | | NGYHIQQTYLITKLLEYRSIVLLADLPS------SNNLLIELFHIFYDP-------------NKSFLFNVIGGILGEVISEFD-----SVPLEVLRLIFNKFLTYN----------PNEIP----------------------EGLNVTSDCGYEVSLILCDTYSNRSRHLTKYYSEIIHEATNDDNNSRLLTVVVKLHKLVLRLWETPELINAV-IGFIYHELSSENETSYSDLNFVSTH-----SDTFKAWISKIADISPDEWTESIPQIIATREDIELNQALAKTFIDSD--PRVRRTSVMIFNKV--PVTEIWKNIKAIYTSLLHLAREKHKEVRELCINTMAKFYNKEIWEIIDTIPSTLYNLYYIND------LNINEQVDSVIFEYLLPFEPDNDKRVHRLLTVLSTSFFAFNARQIKISFAISKYIDFSKFLNNQESMSSSQGPIVM |
7 | 5dh9C | 0.10 | 0.07 | 2.69 | 0.96 | CNFpred | | KNSMSKEFEQIFCFQVLE-------------QGSSSSLIVATLESLLRYLHWIPYRYIYE--------TNILELLSTKFMTSP------DTRAITLKCLTEVSNLKIPQD----------NDLIKRQTVLFFQNTLIATSVMPVTADLKATYANANGNDQS---------------------------------FLQDLAMFLTTYLARNRALLESDESLRELLLNA------------HQYLIQLSKI-----------EERELFKTTLDYWHNLVADLFYEP-----LKKHIYEEICSQLRLVIIENMVRPIQLYKSEREVLVYLTHLNVIDTEEIMISKLARQIDG-SEWSWHNINTLSWAIGSISG-----TMSEDTEKRFVVTVIKLGLCEQK-DNKAVVASDIMYVVGQYPRFLKHWNFLRTVILKLFEFMHE---------------- |
8 | 5yz0A | 0.04 | 0.03 | 1.41 | 0.67 | DEthreader | | D-R-AAQIIHYHGVVKSMLLGQLSTVITVNGVELTYRVEAAWKLSQ-W----------------------------DLV-EN-YLA---ADG-KSTTWSVRLG----LVRAQIVPLSAASGYEYI---LHMLCLLLNKRSAAALLNAGRDVQAMETFYKYKIYQSMPRFLTAFSYQAWMMTLEFVGDTRTDKLLLCLQMMCDDLRKDCRLMEF--NSLINKLLHIRTYA-VI----------E-------------VNNT--AGLRPILTKLY-KEKGV-YM-TGKELRQCMKVFREFLLPRHPPIFHEWFLSRAYCRSTAVMSMVGY----------I-LGLGDRHGENILFVHVDFN------E---V-----------VP--LTHNMVNGMTEGLFRRACEV-M---------------FLHDPLVEWS-------------T-GEVVNEAK |
9 | 6pcvA | 0.10 | 0.08 | 3.13 | 0.97 | MapAlign | | -------------------------------LEDIMSKGVRLYCRLHTPV-IKDRDYHLKTYKSVLPGSKLVDWLLAQDC---------QTREEAVALGVGLCNNGFMHHV-------LEKSEFRDES-QYFRFHVYAVGRGSEAMAAGLCAGQCILKVNGSNVMNDGAPEVLEHFQAFRSRREEALGLYQWIYHHEDAQEALTAKILEAFAANDRIACYQEFAAQLK------SRVSPPFKQAPLEPHPLCGLDFCPTNCHINLMEVSYPKLNPMSYTQHCITTMAAPSWKCELQLRRDAIFCQALVAA---VCTFSEQLLAALGYRYNNNGSSRDASRKWLEQVAATTVKEERTMLEDIWVTLSELKIDQLIRPINALDELCRLMKS-FVHPKPGAAGSVGAGLIPISSELCYRLGAGMQRSTLSVSLEQAAILARSHGLIMQATDIMRKQGP |
10 | 3ea5B | 0.11 | 0.11 | 3.81 | 0.69 | MUSTER | | EQPENVKRASLLLGYMCESADPQSQVSSSNN------ILIAIVQGAQSTETSKAVRLALIFIKNNMEREGERNYLMQVVCEATQAEDIEV-QAAAFGCLCKIMSK------YYTFMKPYMEQAL----ALTIATMKSPNDKVCEEEIDIAYELAQFPQSPLQSYNFALSSIKDVVPNLNLLTRQNEDPEDDDWNVSMSAGACLQLFAQNCGNHILELEFVEQNITADNWRNRIMDGPDKVQRTYYVHQALPSILNLMND-QSLQVKETTAWCIGRIADSVAESIDPQCLIGLQDHPKVATNCSWTIINLVETPSPIYNFYPALVDGLIGAANRNARASAFSALTTMVEYATDTVAETSASISTFVMDKLGLTLEDAQSLQELQSNILTVLAAVIRKSPSSVEPVADMLMGLFFRLLEKIEDLGKGFEKYLETFSPYLLKANQVDSPV-ADISNSL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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