Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260
| | | | | | | | | | | | | |
| SS Seq | CCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MVMSHPHAVNEIALSLNNKNPRTKALVLELLAAVCLVRGGHEIILSAFDNFKEVCGEKQRFEKLMEHFRNEDNNIDFMVASMQFINIVVHSVEDMNFRVHLQYEFTKLGLDEYLDKLKHTESDKLQVQIQAYLDNVFDVGALLEDAETKNAALERVEELEENISHLSEKLQDTENEAMSKIVELEKQLMQRNKELDVVREIYKDANTQVHTLRKMVKEKEEAIQRQSTLEKKIHELEKQGTIKIQKKGDGDIAILPVVASGTLSMGSEVVAG |
1 | 2bnxB | 0.21 | 0.12 | 3.75 | 0.83 | DEthreader | | TMLETEEGILLLVRAMDPAVPNMMIDAAKLLSALCILPPMNERVLEAMTERAEMDEV-ERFQPLLDGLK-SGTSIALKVGCLQLINALITPAEELDFRVHIRSELMRLGLHQVLQELREIENEDMKVQLCVFDEQGDEDFFDLKGRLDIINTVKDSKA------------------------------------------------------------------------------------------------------------------ |
2 | 4kf7A | 0.08 | 0.08 | 3.28 | 0.68 | MapAlign | | ILKSALDIYTRMLSSRFPYEFLPFASMCRILSAALVSDNSSELITGLLVKNPSLTFEHSTLALFGKRLEVNLLSADELIEGISLLATVLRAETDPDRGLRILTEASRLLIMNVVCDTLDLVKTAALSSCLQFLHAAPVCLLSAVKLFSSLVDSIVSRVTLSIAQTSVDVFEEVDRSVMIRDVVGIMHKLMLYTAPAADYVVESFLATLLAAAQIVSERLTTVLEFATILLRIQTQLFKSACIARLPAIRHSFRAISLLSALVESAGKSSGEP |
3 | 4yc7B | 1.00 | 0.51 | 14.21 | 1.29 | SPARKS-K | | MVMSHPHAVNEIALSLNNKNPRTKALVLELLAAVCLVRGGHEIILSAFDNFKEVCGEKQRFEKLMEHFRNEDNNIDFMVASMQFINIVVHSVEDMNFRVHLQYEFTKLGLDEYLDKLKHTESDKLQVQIQAYLDNVFD-------------------------------------------------------------------------------------------------------------------------------------- |
4 | 2bnxB | 0.16 | 0.14 | 4.77 | 0.44 | CEthreader | | TMLETEEGILLLVRAMDPAVPNMMIDAAKLLSALCILPDMNERVLEAMTERAEMD-EVERFQPLLDGLKSGT-SIALKVGCLQLINALITPAEELDFRVHIRSELMRLGLHQVLQELREIENEDMKVQLCVFDEQGDEDFFDLKGRLDMEMDDFGEVFQIILNTVKDSKAEPHFLSILQHLLLVRNDYEARPQYYKLIEECVSQIVLHKNGTDPDFKCRHLQIDIERLVDQMIDKTKVEKSEAKATE------------------------- |
5 | 4yc7B2 | 1.00 | 0.49 | 13.59 | 1.07 | MUSTER | | ------HAVNEIALSLNNKNPRTKALVLELLAAVCLVRGGHEIILSAFDNFKEVCGEKQRFEKLMEHFRNEDNNIDFMVASMQFINIVVHSVEDMNFRVHLQYEFTKLGLDEYLDKLKHTESDKLQVQIQAYLDNVFD-------------------------------------------------------------------------------------------------------------------------------------- |
6 | 2bnxB | 0.15 | 0.12 | 4.07 | 1.03 | EigenThreader | | TMLETEEGILLLVRAMDPAVPNMMIDAAKLLSALCILEDMNERVLEAMTERAEMDEVERF--QPLLDGLKSGTSIALKVGCLQLINALITPAEELDFRVHIRSELMRLGLHQVLQELREIENEDMKVQLCVFDEQGDEDFFDLKGRLDGEVFQIILNTVKEPHFLSILQHLLL-------------------------------------------------------VRPQYYKLIEECVSQIVLHKNGTDPDFKCRHLQIDIERLVDQMI |
7 | 4yc7B | 1.00 | 0.51 | 14.21 | 3.50 | HHsearch | | MVMSHPHAVNEIALSLNNKNPRTKALVLELLAAVCLVRGGHEIILSAFDNFKEVCGEKQRFEKLMEHFRNEDNNIDFMVASMQFINIVVHSVEDMNFRVHLQYEFTKLGLDEYLDKLKHTESDKLQVQIQAYLDNVFD-------------------------------------------------------------------------------------------------------------------------------------- |
8 | 2bnxB | 0.19 | 0.17 | 5.32 | 3.35 | HHsearch | | TMLETEEGILLLVRAMDPAVPNMMIDAAKLLSALCILPDMNERVLEAMTERAEM-DEVERFQPLLDGLKSG-TSIALKVGCLQLINALITPAEELDFRVHIRSELMRLGLHQVLQELREIENEDMKVQLCVFDEQDEDFFDLKGRLD------MEMDDFGEVFQIILNTVKDSKAEPH--FLSILQHLLLVRNDYEARPQYYKLIEECVSQIVKNGTDPDKCERLVDQMKTKVEKSEAKATE------------------------------ |
9 | 4yc7B2 | 1.00 | 0.49 | 13.59 | 1.53 | FFAS-3D | | ------HAVNEIALSLNNKNPRTKALVLELLAAVCLVRGGHEIILSAFDNFKEVCGEKQRFEKLMEHFRNEDNNIDFMVASMQFINIVVHSVEDMNFRVHLQYEFTKLGLDEYLDKLKHTESDKLQVQIQAYLDNVFD-------------------------------------------------------------------------------------------------------------------------------------- |
10 | 2bnxB | 0.19 | 0.16 | 5.10 | 1.43 | FFAS-3D | | -MLETEEGILLLVRAMDPAVPNMMIDAAKLLSALCILPDMNERVLEAMTERAEMD-EVERFQPLLDGL-KSGTSIALKVGCLQLINALITPAEELDFRVHIRSELMRLGLHQVLQELREIENEDMKVQLCVFDEQGDEDFFDLKGRL-----DMEMDDFGEVFQIILNTVKDSKAE--PHFLSILQHLLLVRNDYEARPQYYKLIEECVSQIVERLVDQMIDKTKVEKSEAKATE------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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