Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500
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| SS Seq | CCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCSCCCCCCCCCCCCCCCSCCCCCCCCCSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSCCCCCCCHHHCCCCCCCCCSSCCCCCCSSCCCCCHHHHCCCCCCCCCSCCCCCCCSSCCCCCCHHHCCCSCCCCCCCCCCCCCSSCCCCCHHHSCCCSCCCCCSCCCCCCCSCCCCCCHHHHCCCCCCCCCSCCCCCCCSCCCCCCCCCSSCCSCCCCCCSCCCCCCSSCCCCCHHHHSCCSCCCCCSCCCCCCCSSCCCCCHHHSSCCCCCCCCSCCCCCCCSSCCCCCHHHSSCCSCCCCCSCCCCCCCSSCCCCCHHHHCCCCCCCCCSSCCCCCCSCCCCCCCHHHSCCCCCCCCSCCCCCCCSSCCCCCCHHHCCCCCCCCCCCCCCCCCSCCCCCCCCCSSCCSCCCCCSCCCCCCCSSCCCCCCHHHCCCCCCC MGTENKEVIPKEEISEESEPHGSLLEKFPKVVYQGHEFGAGCEEDMLEGHSRESMEEVIEQMSPQERDFPSGLMIFKKSPSSEKDRENNESERGCSPSPNLVTHQGDTTEGVSAFATSGQNFLEILESNKTQRSSVGEKPHTCKECGKAFNQNSHLIQHMRVHSGEKPFECKECGKTFGTNSSLRRHLRIHAGEKPFACNECGKAFIQSSHLIHHHRIHTGERPYKCEECGKAFSQNSALILHQRIHTGEKPYECNECGKTFRVSSQLIQHQRIHTEERYHECNECGKAFKHSSGLIRHQKIHTGEKPYLCNECGKGFGQSSELIRHQRIHTGDKPYECNECGKTFGQNSEIIRHIRIHTGEKPYVCKECGKAFRGNSELLRHERIHTGEKPYECFECGKAFRRTSHLIVHQRIHTGEKPHQCNECARTFWDNSELLLHQKIHIGEKPYECSECEKTFSQHSQLIIHQRIHTGEKPYECQECQKTFSRSSHLLRHQSVHCME |
1 | 5v3jE | 0.54 | 0.30 | 8.62 | 2.70 | FFAS-3D | | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PHKCKECGKAFHTPSQLSHHQKLHVGEKPYKCQECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIHT-- |
2 | 5hb4B | 0.05 | 0.04 | 1.72 | 0.67 | DEthreader | | --------------AWWIAEHHGFVTLVLRKLRTEE----------D--EQRQLRPNHEQDMDLERFLIIILASSPLVSIKELEYFTTKVCSPAEIEPALMLECYLRLIKLASIARKRLIMVFYVLKALIF--FEQSN------------Q---------------------------------------------------------PPEGLNSLNDVTFNEDVIKALELQET--ELLACLKLLEKISLISSLSASIMA--GENYRVKLLLNVLITLTVSEEEQ-GMRGYLVTLLPWDGQLVTGCEFLLYKWEEIPS--------CILEGVHY------------LTARLNLLQ--A----LVMIESNDF---FELARVAKVLLWKLQVGNLIGD--KLFQLFQLCLSACRTLKAITLYGDR------LLNVICDDALLNFIGVLDSLKEILNEW-S-YTSAKLALSVFAALEYAVAQQALEERIEEL-EA--L------- |
3 | 5v3jE | 0.54 | 0.30 | 8.62 | 6.99 | SPARKS-K | | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PHKCKECGKAFHTPSQLSHHQKLHVGEKPYKCQECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIHT-- |
4 | 3hmjG | 0.06 | 0.06 | 2.72 | 1.63 | MapAlign | | GFAADDEPTTPAELVGKFLGYVSSLVEPSKVGQFDQVLNLCLTEFENCYLEGNDIHALAAKLLQENDTTLVKTKELIKNYITARIMAKRPFDKKSNSALFRAVGEGNAQLLSISNLTQEQVQDYVNKTNSHLPAGKQVEISVNGAKNLVVSGPPQSLYGLSFNAKDIPVYDTFDGSDLRISERIVDCTDGASGLGVHKDGTGVRVIVDYGFKQKKNPNMTPCTVPVTNGYTIELAAIDSVVSINLIIQFLTIGVPSLEVAGLKQVINIAKAQTYKKPTGIVTVRSEPIHKIATRGVMLWKFKPSGMVVEISSSKTVVTLSEKPTVILKLLKENIIQMEMIEVSLPLLYFAIVVGWRAIIKAIVIESVVNGKIVDVVGTSSFFYQETLTFETETEVFSSVKCFGEIGIVDYEAGASLKTSIQHVGGRKLIKFVLTGEEYAALASNYGMIVNVENQQYVAAGDLRALDTVTNARLAGKYIPNLTAKPFQVTKEYFQDVYDLTGS |
5 | 5v3mC | 0.54 | 0.30 | 8.62 | 13.73 | CNFpred | | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PHKCKECGKAFHTPSQLSHHQKLHVGEKPYKCQECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIHT-- |
6 | 6u5vB | 0.07 | 0.07 | 2.88 | 1.58 | MapAlign | | PDQDYLLSVPVSCPVICVIQLCHYTITCKVLGLTPGEFRNSLKWSTGHSQGLVTAVTIAASDSWDSFNSLTAVSLLLFIGSRCLSTYPRTSLPPTMLQDSLDNGEGRPSPMLSVRDLSIKQVEKFIEQTNSHLPREKHIAISLINGAVLSGFAPFHSHLVHWETHILDFGVTGARIILAGYGFKKFSQLLGRAPLMVAGMTPTTYHIELYGLGINIYVLTIGAGVYITHLGLKPDAISQVIAIF-PIVLQWTGGGGGHHSFGSGFGGVLFGSPIHKAKHSKVTIKKLTAFENIGDLLPVVEIELLSLIEHT-ADTNPVALYWKLWGSKAISTKAEIKAVSGKLVEVVGTTSQFLYRGEYVLTFRCESSIKTTGQVLLESVDYENPVTPNDTLQTTIIKVETRNVELPVLIGEIVQNNPNELTITTTSYTFLLTQFTQPALTLMEKAYEFAGHSLGESASLESLVDVVFYRGSNYGMVAVENQQYVAAGDRALDTLTNVLNVL |
7 | 5v3jE | 0.54 | 0.30 | 8.62 | 2.79 | HHsearch | | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PHKCKECGKAFHTPSQLSHHQKLHVGEKPYKCQECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIHT-- |
8 | 1vt4I3 | 0.07 | 0.06 | 2.66 | 1.55 | MapAlign | | RSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAIFEEAHKQVQGGGGGGGGGGGGGGGGGGGGGGGGGG-----------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-GGGGGGGGGGGGGGGGGGGGGGG-GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-GG---GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG----- |
9 | 5v3gD | 0.59 | 0.20 | 5.66 | 2.06 | FFAS-3D | | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSEKPYVCRECGRGFSNKSHLLRHQRTHTGEKPYVCRECGRGFRDKSHLLSHQRTHTGEKPYVCRECGRGFRDKSNLLSHQRTHTGEKPYVCRECGRGFSWQSVLLRHQRTHTGEKPYVCRECGRGFRDKSNLLSHQRTHTGEKPYVCRECGRGFRNKSHLLRHQRTHT-- |
10 | 5v3jE | 0.56 | 0.31 | 8.83 | 1.02 | CEthreader | | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------PHKCKECGKAFHTPSQLSHHQKLHVGEKPYKCQECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIHT---------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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