Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSCCCCCSSSSSSSCCCCCSSSSSCCCCCCCCCCCCCCCCSSSSSCCCCCSSCCHHHHHHHHCCCCCCCSSSSSSSSCCCCCCCCCCCCCCCCSSSSCCCCCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHCCCCCCSSSSSSCCCCCHHHHHHHHHHHHHHCCCCCCCCCCSSSC MLAVPEMGLQGLYIGSSPERSPVPSPPGSPRTQESCGIAPLTPSQSPKPEVRAPQQASFSVVVAIDFGTTSSGYAFSFASDPEAIHMMRKWEGGDPGVAHQKTPTCLLLTPEGAFHSFGYTARDYYHDLDPEEARDWLYFEKFKMKIHSATDLTLKTQLEAVNGKTMPALEVFAHALRFFREHALQELREQSPSLPEKDTVRWVLTVPAIWKQPAKQFMREAAYLAGLVSRENAEQLLIA |
1 | 4j8fA1 | 0.22 | 0.14 | 4.47 | 1.00 | DEthreader | | ------------------------------------------------------FM-AKAAAIGIDLGTTYSCVGVFQ-HGKVEIIAN--DQ-----G-NRTTPSYVAFTD-TER-LIGDAAKNQVA---L--NP-QNTVFDAKRLIGRKGDDGDKPKVQVSYTKAFYPEEISSMVLTKMKEIAEAYLG------YP--VTNAVITVPAYFNDSQRQATKDAGVIAGLN----V--LRII |
2 | 3iucC1 | 0.27 | 0.18 | 5.62 | 1.95 | SPARKS-K | | --------------------------------------------------NLYFQSMDVGTVVGIDLGTTYSCVGVFKNGRVEIIANDQG---------NRITPSYVAFTPEGER-LIGDAAKN-QLTSNPENT-----VFDAKRLIGRTWNDFLPFKVVEKKTKTFAPEEISAMVLTKMKETAEAYLG--------KKVTHAVVTVPAYFNDAQRQATKDAGTIAGL----NVMRIINE |
3 | 3iucC | 0.25 | 0.16 | 4.90 | 0.95 | MapAlign | | --------------------------------------------------------MDVGTVVGIDLGTTYSCVGVFK---NGRVEII------ANDQGNRITPSYVAFTPEGERL-IGDAAKNQL--------TSNNTVFDAKRLIGRTWPFKVVPYIQVDIGGTFAPEEISAMVLTKMKETAEAYL---------GKKVHAVVTVPAYFNDAQRQATKDAGTIAGLN-------VMII |
4 | 7a4uA1 | 0.27 | 0.17 | 5.25 | 0.82 | CEthreader | | ----------------------------------------------------------SGTVVGIDLGTTYSCVGVFKNGRVEIIAN---------DQGNRITPSYVAFTPEGE-RLIGDAAKNQLTSN------PENTVFDAKRLIGRTWEKKTKPYIQVDITKTFAPEEISAMVLTKMKETAEAYLG--------KKVTHAVVTVPAYFNDAQRQATKDAGTIAGL----NVMRII-- |
5 | 2v7yA3 | 0.24 | 0.15 | 4.53 | 1.32 | MUSTER | | ----------------------------------------------------------MSKIIGIDLGTTNSCVAVLEGGEVKVI---PNPEG------NRTTPSVVAFKNGE--RLVGEVAKRQAITNPN-------TIISIKRHMGTDYKV-------EIEGKQYTPQEISAIILQYLKSYAEDYLGEPVT--------RAVITVPAYFNDAQRQATKDAGRIAGLEVERII------ |
6 | 4gniA1 | 0.21 | 0.13 | 4.22 | 2.01 | HHsearch | | -----------------------------------------------------------RVVIGITFGNSNSSIAHTVDDKAEVIA---NED------GDRQIPTILSYVDG-D-EYYGQQAKNFLV-RNPKNT-----VAYFRDILGQDFKSVDVFTIKDKEPSTLTVSEIATRYLRRLVGAASEYLGK--------KVTSAVITIPTNFTEKQKAALIAAAAAADL----EVLQLI-- |
7 | 2v7yA3 | 0.24 | 0.14 | 4.28 | 1.63 | FFAS-3D | | ----------------------------------------------------------MSKIIGIDLGTTNSCVAVLEGGEVKVI---------PNPEGNRTTPSVVAFKNGERL--VGEVAKRQAITNP--------------NTIISIKRHMGTDYKVEIEGKQYTPQEISAIILQYLKSYAEDYL--------GEPVTRAVITVPAYFNDAQRQATKDAGRIAGL------------ |
8 | 4j8fA1 | 0.21 | 0.13 | 4.23 | 0.82 | EigenThreader | | -----------------------------------------------FMAKAA--------AIGIDLGTTYSCVGVFQHG----KVEIIANDQ-----GNRTTPSYVAFTD--TERLIGDAAKNQV--ALN----PQNTVFDAKRLIGRKFGDPVVQSDMK--HWPFGPEEISSMVLTKMKEIAEAYLG---------YPVNAVITVPAYFNDSQRQATKDAGVIAGLN------VLRII |
9 | 5obuA | 0.20 | 0.12 | 3.87 | 1.56 | CNFpred | | ------------------------------------------------------------LIIGIDLGTTNSCVSVMEGGRPVVLENP---------EGKRTTPSIVSYKN--NEIIVGDAAKRQMV-------TNPNTIVSIKRLMGT----SNKVKVQNATTKELSPEQVSAQILSYLKDFAEKKIGK--------KISRAVITVPAYFNDAERNATKTAGKIAGLN----VERIINE |
10 | 4j8fA | 0.22 | 0.14 | 4.47 | 1.00 | DEthreader | | ------------------------------------------------------FMAK-AAAIGIDLGTTYSCVGVFQ-HGKVEIIAN--DQ-----G-NRTTPSYVAFTD-TER-LIGDAAKNQVA---L--NP-QNTVFDAKRLIGRKGDDGDKPKVQVSYTKAFYPEEISSMVLTKMKEIAEAYLG------YP--VTNAVITVPAYFNDSQRQATKDAGVIAGLN----V-LRIIN |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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