Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420
| | | | | | | | | | | | | | | | | | | | | |
| SS Seq | CCSSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCHHHHHHHCCCCCCSSCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCSSCCCCCSSCCCCC QRKAIYQLNQEKLEYNLQVLKKRDEESTVIKSQQKRKINRLHDILNNLRSKYAKQIKQFQEENQSLTSDYKRLVMQFKELQKAMRHFALIDDEKFWEIWLMNEEEAKDLIARAFDVDRIIHTHHLGLPWAAPDFWFLNNVGPISQQPQKSATQIVEEMLMRSEEEEAEEAAAEPESYLDLPKQISEKTTKRILMLLCDESGFLIESKLLSLLLPLEQNECYLLRLDAIFSALGIESEDDLYKLVNFFLKYRAHRLSSSLQIKPCSQASMEKASMEETSTRSELELAEQTEMEGEKEESLVEGEKEEEEETPPSPWVIHPNDVLKILEAFVMGLKKPRDSRAPLRVQKNVRDNSKDSEYWQALTTVIPSSKQNLWDALYTALEKYHLVLTQRAKLLLENSSLEQQNTELQALLQQYLNSKINSELQVPPTQVLRVPTK |
1 | 5lm1A | 0.16 | 0.11 | 3.74 | 1.11 | FFAS-3D | | --EASSLYSEEKAKLLREMMAKIEDKNEVLDQFMDSNLDAYSHIPPQLMEKCAATVRNLVQSMQVLSGVFTDVEASLKDIRDLLEEDELLEQKAELAEVRREWAKYMEVHEKASFTNSELHRAM---------------------------NLHVGNLRLLSGPLDQVRAALPTPALSP----EDKAVLQNLKRILAK------VQEMRDQRVSLEQQLRELIQKDDITASLVTTDHSEMKKLFEEQLKK----------------------------YDQLKVYLEQN--------------------------LAAQDRVLCALTEANVQYAAVRRVLSD--------LDQKWNSTLQTLVASY-EAYEDLMKKSQEGRDFYADLESKVAALLERTQSCQAREAARQQLLDR----------------------- |
2 | 1vt4I | 0.14 | 0.12 | 4.16 | 1.35 | HHsearch | | ----------------------MDFETGEHQYQYKDILSVFEDAF---VDNFDCKDVQDMPKSILSKEEIDHIIDAVSGTLRLFWTLLKFVEEVLRINYKMSPIKTEQMMTYIEQRDRLYNDNQVFAKYNVSRLQYLKLLLELRPAKLGSGKDVCQCKMDFK------------IFWLNLKNCNSPETVLEMLQKLLYNWTSDHSSNIKLRIHSIQAELRRLLKSKPYLVLLNVQ----NAKAWNAF-NLSCKILLTTRFKQ--VTDFLSAATTTHISLDHHLTPDEVKS------LLLKY-LDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWHVCDKSSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSMVVVNKLHKYSKQPSIYLELKVKLENEYALHRSIVDHYNIPKDSDDLIPPYLDHIGHHLK |
3 | 7kogB | 0.10 | 0.10 | 3.72 | 0.52 | CEthreader | | KLKTKAEHDRTHVQNDLNNTRHALDQMCREKAATEKIAKQLQHQVNEIQGKLDEANRTLNDFDSAKKKLSIENSDLLRQLEEAESQVSQLSKIKVSLTTQLEDTKRLADEEARERATLLGKFRNLEHDLDNIREQLEEEAEGKADIQRQLSKANAEAQLWRTKYESEGVARAEELEEAKRKLQARLAEAEETIESLNQKVIALLATEVEDLQLEVDRATAIANAAEKKAKAIDKIIGEWKLKVDDLAAELDASQKECRNYSTELFRLKGAYEEAQEQLEAVRRENKNLADEVKDLLDQIGEGGRNIHEIEKQKKRLEVEKDELQAALEEAEAALEQEENKVLRSQLELSQVRQEIDRRIQEKEEEFENTRKNHQRALDSMQASLEAEAKGKAEALRMKKKLEADINELEIALDHANKANSEAQKTIKKYQQQLKDVQ |
4 | 2ipcA | 0.08 | 0.08 | 3.07 | 0.70 | EigenThreader | | KTGEGKTLVATLAVALNALYLARRDAEWMGPVYRGAERRKAYLSELGFDYLRDNDLYYKMAEIAKKLQGIAKAEKLLGIEGLFSELAHMLIQAIRAKELEGLHQAIEAKEQNFFRTEEKEFQEIYGMDVP------------TNRPVIRTEKGKFYAVVEEIAEKYERGQEKSERLSQMLKEPRLYLPRLEMRLELFKKASQKQQGERLRKLLQLKDEDLAPFEGLIRTAWEGLKRAVHTLAVLRQGAEIVAQAGRIKLGGNPEYLAAALLEKEGFDRYEWKVELFIKKMVAGKALAQELGIREELLERIREIREECKQDEERVRRIDNQLRGRAGRQGDPGFDDSEPIEHPMVTRSIERAQKRVEDRNFAIRKQLLQFDDVLSRQREVIYAQRRLILLAIGMVEETVASLAENFLNPEVHPEDWDKATLLDTAPQL |
5 | 4dylA | 0.12 | 0.09 | 3.26 | 1.10 | FFAS-3D | | -----HGVLQQMQEAELRLLEGMRKQRVKSDREYAGLLHHMSQSWAEITSQTEGLSRLLRQHAEDLNSGPSKLSLLIRERQQLRKTYSEQWQQLQQELTKTHSQDIEKLKSQYRALARDSAQAK----------------------RKYDKAKDKYVRSLWKLFAHHNRYVLGVRAAQLHHQHHHQLLLPGLLRSLQD-----LHEEMACIL------KEILQEYLEISSLVQDEVVAIHREMAAAA---------------------------ARIQPEAEYQGFLRQYGSAPDVPPCVTFDESLLEPGELQLNELTVESVQHTLTSVTDELAV------------ATEMVFRRQEMVTQLQQELRNEEENTHVQLLGKRQVLQEALQGLQVALCSQAKLQAQQELLQTKLE-----HLGPG-EPPP--------- |
6 | 6d03E | 0.12 | 0.10 | 3.66 | 0.87 | SPARKS-K | | YYLISQLRPHFSNIYFFDEFKRYASEIKRYEDIHKTKVNSLLNEASRAIGICNRAKNTVKGLINILEQKFKSYDVKLRQYEEKKEAFRGCLLNKN-----------RKNLDQIKKINNEIRDLLEKLKCS-------------QDCQTNVYFDMIKIYLVDFKKMPYENYDTFIKQYKNSEKQIDNPVTINAIKFTQKEMGYIIDKHSIDQVTALSTKNRLKEYYFNIGNYYSFKGKDSLNMLNKALIHKEKIVHNLLGELFGHLEERISKLIDSEYFITESNNIISQSEETLKLAEDVYDKNTKHLEINEFKESIIYIQSYVSSIKSAYRYNVLEKDSVESKNIPANSNAQKKVDELLSIIDSISNFSVAENFQKMKDYYKEIEKLKIKILQLIEAIKKYQQHVEELI---------------------------- |
7 | 1hciA | 0.11 | 0.08 | 2.70 | 0.94 | CNFpred | | ------------IAGAWQRLEQAEKGYEEWLLNEIRRLERLEHLAEKFRQKASTHETWAYGKEQILLQKD---SASLTEVRALLRKHEAFESD---------LAAHQDRVEQIAAIAQELNELD------------------------------------------------------------DAVNVNDRCQKICDQWDRL-GTLTQKRREALERMEKLLETIDQLHLEF----AKRAAPFNNWMEGAMEDL----DMFIVHSIEEIQSLITAHEQFKATLPEADGERQ--------------------------SIMAIQNEVEKVIQSYNIRISSSNPYSTV----TMDELRTKWDKVKQLVP----IRDQSLQEELARQHANERLRRQFAAQANAIGPWIQNKMEEIARSS--------------------- |
8 | 2vz8B | 0.06 | 0.03 | 1.46 | 0.50 | DEthreader | | -------------------------------------------------------------------------------------------------NLEEFWANLIGGVDMVTADDRRWKAGLYGLPSGTCSNMAIKVLSLEHGIRGGNQPNSRPAP-AFGMLNEIALTSLGLQPGIIGHSLGGGAMAAPACHNSKDTV------------QLKREDVFVKEV-----------------------WLSTSIPEAQWQGSLA-------------------------------------R---TFSEYSNLVSPVLFQEALQHVPAHAVVVILVSVNPNGPVFAPRGTPLIS-P------------------VPSAADFP----AVYKFDVSPDHYLVDHCIVP-LSQGDVYKDL---------SDLEGNRGRLMV |
9 | 6gauA | 0.05 | 0.05 | 2.30 | 0.84 | MapAlign | | STGERGLHHLIWEVVDNAVDEVARRLQEMAFLGTHEEGFRSALTEVKSFVQKVCNEQLTHWFVVVNKAVSSAQARIAARKARELVEVQAIITALLMADADVDGQHISTLLLTLLFRFMRPLIENGHVLKAGKKINKEDGIQRYKGLGEMDAKELWETTEMQRSYIDYAMSVIVGRALPEVRDGLKPVHRRVLYASLVRMELADA-VFWALENHDADEEETLAAVMGRVGTA-DAYKTGRGSIRMRGVVEVERTSLVITELPYQVNHDNFITS-------IAEQVRDGKLAGISNIEDQSSDRVGLRIVIEIKRDAVAKVVINNLYKHLQNMLAIVDGVPRTLRLDQLIRYYVDHQLDVIVRRTTYRLRKANERAHILRGLVQRIIDDLAKIEAEIADLEDIPERQRGIVRDELAEIVDRHG---------------- |
10 | 1sjjA | 0.10 | 0.09 | 3.42 | 0.84 | MUSTER | | KVLAVNQENEQLMEDYEKLASDLLEWIRRTIPWLENRMQAMQQKLEDFRDYRRLHKPPKVQEKCQLEINVSDINNAWGGLEQAEKGYEEWLLNEIRR-LERLDHLAEKFRQKASIHESWTDGKEAMLQQKDYETATLSEIKALLKK----HEAFESDLAAHQDR----EQIAAIAQELNELDYYDSPSVNARCQKICDQWD--LGALTQKRREALERTEKLLETIDQLYLEY----AKRAAPFNNWMEGAMEDLQDTFIVHTIEEQGLTTAHEQFKATLPDADKERQAILGIHNEVSKIVQTYHVNMAGTNPYTTI-TPQEINGKWEHVRQLVPRRDQA--MEEHARQQQNERLRKQFGAQANVIGPQTKMEEIGRISIE-GTLEDQLNHLRQYEKSIVNYKPKIDQLEGDHQQIQEALINKHTN---YTMEHIRVG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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