Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300
| | | | | | | | | | | | | | | |
| SS Seq | CCCCCCHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHC MNPPGSLEALDPNVDEHLSTQILAPSVHSDNSQERIQARRLRIAARLEARRREALGEYLDGKKESEEDQSKSYKQKEESRLKLAKLLLCGTELVTNIQVAIDIREIHRRVEEEEIKRQRIEKLENEVKTSQDKFDEITSKWEEGKQKRIPQELWEMLNTQQLHCAGLLEDKNKLISELQQELKTKDDQYVKDLKKQSDDICLLLERMEEQVKNVMKTFREELYNIEKAFEVERQELLASNKKKWEQALQAHNAKELEYLNNRMKKVEDYEKQLNRQRIWDCEEYNMIKIKLEQDVQILEQQLQ |
1 | 6grjG | 0.07 | 0.06 | 2.49 | 1.05 | EigenThreader | | TDQGANQASQAQIQTYCNSVKQQVPVDFSQFPNLKDNQTQINQGLDLAKGHADLYLNTLPPGSTKAQWLRQLSVIKEQATDTRLVIVNLNNNLITDSSNFQGIVVNLNSKVQLAQLNGDIDKVNAAIDGAIAGIVAGGLLVIGGAFVTAIGAVVIGGVAGAGGITAGAIVLHNSLGARQDLYQKRSSLNSEVLI-ATQIGNGYKGLQVQAQNAVTAATQAWDSLTSDLGSLITDLDKGDDIRQLWLTAADTTVKTVLTDVTTIKAQIAGP--------------------------------- |
2 | 2tmaA | 0.13 | 0.11 | 3.92 | 1.48 | FFAS-3D | | ------MDAIKKKMQM------------LKLDKENALDRAEQAEADKKAAEDRSKQ--------LEDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRR--IQLVEEELDRAQERLATALQKLEEAEKAADEERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRK-YEEVARKLVIIESDLERAEERAELSEGELEEEIKTVTNNLK-SLEAQAEKYSQKEDKYEEEIKVLSDK-LKEAETRAEFAERSVTKLEKSIDDLEDELY-AQKLKYKAISEELD |
3 | 7jh5A | 0.10 | 0.09 | 3.41 | 1.15 | SPARKS-K | | --------SGSELARKLLEASTKLQRLNIRLAEALLEAIARLQELNLELVYLAVELTDPKRRDEIKEVKDKSKEIIRRAEKEIDDAAKESEKILEEAREAISELAKLLLKAIAETQDLNLRAAKAFLEAAAKLQELNIRAVELLVKLTDPATIREALEHAKRRSKEIIDEAERAIRAAKRESERIIEEARRLIEKGSELARELLRAHAQLQRLNLELLRELLRALAQLQELNLDLLRLASEDEARKAIARVKRESNAYYADAERLIREAAAASEKISREAERLI------------------- |
4 | 6yvuB | 0.08 | 0.08 | 3.05 | 1.24 | MapAlign | | DRLSDLIHKSEAFPSLQSCSVAVHFQYVIDTSRIDEPGLIIKNSLESGKETALEFRELEGTRVSLEERTKNLVSKMEKAEKTTKHSISEAENMLRGQQTEHETEIKDLTQLLEKLKKNVETLILAKKTHKQELQDLILDLKKKLNSLKLRDHEPDLESQISKAEMEADSLLTLAEQQVKEAEMAYVESVCQKLDIKLKKVKSASKKSGGDVVKFQKRDVELSSDELKVIEEQLKHTKLALAENDTNMNETLNLKVELKEQSEQLKEQMEDMEESINEFKSIEIEMKNKLEKLNSLLTYIKSEI |
5 | 4tqlA | 0.17 | 0.13 | 4.14 | 1.01 | MUSTER | | ---------------------------------------------------------------------------YKQMVQELEKARDRMEKLYKEMVELIQKAIELMRKIFQEVKQEVEKAIEEMKKLYDEAKKKIEQMIQQIKQGGDKQKMEELLKRAKEEMKKVKDKMEKLLEKLKQIMQEAKQKMEKLLKQLKEEMKKMKEKMEKLLKEMKQRMEEVKKKMDDELLEKIKKNIDDLKKIAEDLIKKAEENIKEAKKIAEQLVKRAKQLIEKAKQVAEELIKKILQLIEKAKEIAEKVLK |
6 | 5i6jA | 0.07 | 0.07 | 2.84 | 1.03 | EigenThreader | | QLTEQMKCLDQQCELRVQLLQDLQDF----------FRKKAEIEMDYSRNLEKLAERFLAKTQNVLNQVKRESRDHTTLSDIYLNNIIPRFVQVSEDSGRLFKKSKEVGQQLQDDLMKVLNELYSVMKTYHMYNADSISAQSKLKEAEKQKMKEKRQAKYTENKLKAIKARNEYLLALEATNASVFKYYIHDLSDLIDQCLGYHASLNRALRTFLSAELNLEQSKHEGLDAIENAVENKIENEEVKKTMEATLQTIQDIVTAKRRANQQETEQFYFTKMKEYLEGRNLITKLQAKHDLLQKTL |
7 | 7ko4P | 0.12 | 0.10 | 3.53 | 1.44 | FFAS-3D | | -------------------------------DKENALDRAEQAEADKKAAEDRSKQ--------LEDELVSLQKKLKGTEDELDKYSEALKDAQEKLELA--EKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYLVIIESDLERAEERAELSEGKCAELEEELKTVTNNLKEAQAEKYSQKEDRYEEEIKVLSDKLKEAETR-AEFAERSVTKLEKSIDDLEDE-LYAQKLKYKAISEELDHALNDMT |
8 | 4tqlA | 0.13 | 0.10 | 3.30 | 1.08 | SPARKS-K | | --------------------------------------------------------------------YKQMVQELEKARDRMEKLYKEMVELIQKAIELMRKIFQEVKQEVEKAIEEMKKLYDEAKKKIEQMIQQIKQG------GD------------KQKMEELLKRAKEEMKKVKDKMEKLLEKLKQIMQEAKQKMEKLLKQLKEEMKKMKEKMEKLLKEMKQRMEEVKKELLEKIKDDLKKIAEDLIKKAEENIKEAKKIAEQLVKRAKQLIEKAKQVAEELIKKILQLIEKAKEIAE |
9 | 6rw9A | 0.07 | 0.07 | 2.87 | 1.21 | MapAlign | | VAQNDPMHYKVSTLMKLLDLLIARGDKAYQERDTLNEAKMWYMQALGLRLFNLRNNLSIDGQPLRDAEAMSELLQNQAGELMLRMQEQALTELKKILEQSRAGAQSRVDSYRALYDENVKRTMDLYLSSAILSTSIGVLDMAAAAAGSRWGGIPKAIGAGMSLAASATKITADNISQSEAWRQEWEIQKNNAESEIRQIDAQLEALRTATEMQREHMQAQTQAQLEFLQRNKALYSWLRGRLASIYYRFYDLTAARCMMAEKAYAWQDTIKSGAWQSNNAGLMAGESLLLNLAEMEQAWLKR- |
10 | 7dl2D | 0.13 | 0.10 | 3.32 | 1.43 | FFAS-3D | | -------------------------------------------------------------------DIQMWKVSLQKEQARYNQLQEQRDTMVTKLHSQIRQLQHDREEFYNQ-SQELQTKLEDCRNMIAELRIELKKANNKVC------HTELLLSQVSQKLSNSESVQQQM-EFLNRQLLVLGE----VNELYLEQLQNKHSDTTKEVEMMKAAYRKELEKNRSHVLQQTQRL-DTSQKRILELESHLAKKDHLLLEQKEDVKLQARGQLQAAESR-YEAQKRITQVFELEILDLYGRLE |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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