Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520
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| SS Seq | CCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCSSSSSSCCCCCCCCSSSSSSSSCCSSSCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCSSSSSSSCCCCCSSSSSCCCCSSCCCCHHHCCCSSSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCSSCCCCCCCCSSSCCCCSSSSCCCCCCCCCCCHHHHHHHCCCCCHHHHHHCCCCCSSSSSSCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCSSCCCCCCCCCCCCCCCCCCCCCCCSSSSSSCCCCSSSSSCCCCCSCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCC MASNNHWFQSSQVPSFAQMLKKNLPVQPATKTITTPTGWSSESYGLSKMASKVTQVTGNFPEPLLSKNLSSISNPVLPPKKIPKEFIMKYKRGEINPVSALHQFAQMQRVQLDLKETVTTGNVMGPYFAFCAVVDGIQYKTGLGQNKKESRSNAAKLALDELLQLDEPEPRILETSGPPPFPAEPVVLSELAYVSKVHYEGRHIQYAKISQIVKERFNQLISNRSEYLKYSSSLAAFIIERAGQHEVVAIGTGEYNYSQDIKPDGRVLHDTHAVVTARRSLLRYFYRQLLLFYSKNPAMMEKSIFCTEPTSNLLTLKQNINICLYMNQLPMSSSDKLTRWEVLGVQGALLSHFIQPVYISSILIGDGNCSDTRGLEIAIKQRVDDALTSKLPMFYLVNRPHISLVPSAYPLQMNLEYKFLSLNWAQGDVSLEIVDGLSGKITESSPFKSGMSMASRLCKAAMLSRFNLLAKEAKKELLEAGTYHAAKCMSASYQEAKCKLKSYLQQHGYGSWIVKSPCIEQFNM |
1 | 1zy7A | 0.30 | 0.18 | 5.49 | 1.00 | DEthreader | | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QP-PHLPQVLADAVSRLVLGKFGDLTNFSSPHA-RRKVLAGVVMTTGDDAKVISVSTGTKCINGEMSDRGLALNDCHAEIISRRSLLRFLYTQLELYLNNKD-DQKRSIFQKS-ERGGFRLKENVQFHLYISTPCGSCSDKIARWNVVGIQGSLLSIFVEPIYFSSIILGS--LYHGDHLSRAMYQRIS-NI-EDLPPLYTLNKPLLSGISNAEARQPGK-APNFSVNWTVGDSAIEVINATTGKDEL-----G---RASRLCKHALYCRWMRVHGKVPSKITKPNVYHESKLAAKEYQAAKARLFTAFIKAGLGAWVEKPTEQDQFSL |
2 | 2mdrA | 0.25 | 0.04 | 1.36 | 1.21 | HHsearch | | ----------------------------------------------------------------------------MMPNRKIGELV---RYLNTNPVGGLLEYARSHGFAAEFKLVDQSGPPHEPKFVYQAKVGGRWFPAVCAHSKKQGKQEAADAALRVLIGENEKAER----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
3 | 1zy7A | 0.32 | 0.20 | 5.92 | 2.79 | SPARKS-K | | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SRQPIPSEGLQLHLP-----------QVLADAVSRLVLGKFGDLTDNFSSPHARRKVLAGVVMTTGTDAKVISVSTGTKCINEYMSDRGLALNDCHAEIISRRSLLRFLYTQLELYLNN-KDDQKRSIFQKSE-RGGFRLKENVQFHLYISTSPMSCSDKIARWNVVGIQGSLLSIFVEPIYFSSIILGSL--YHGDHLSRAMYQRISNI--EDLPPLYTLNKPLLSGISNAEARQPG-KAPNFSVNWTVGDSAIEVINATTGKDELGRA--------SRLCKHALYCRWMRVHGKVPSHLLKPNVYHESKLAAKEYQAAKARLFTAFIKAGLGAWVEKPTEQDQFSL |
4 | 2mdrA | 0.26 | 0.05 | 1.41 | 1.13 | FFAS-3D | | ----------------------------------------------------------------------------MMPNKVRGELVRYLN---TNPVGGLLEYARSHGFAAEFKLVDQSGPPHEPKFVYQAKVGGRWFPAVCAHSKKQGKQEAADAALRVLIGENEKAER----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
5 | 1zy7A | 0.30 | 0.19 | 5.61 | 2.03 | MapAlign | | ---------------------------------------------------------------------------------------------------------------------------------------------PIPSEGLQLHLPQ-------------------------------------------------VLADAVSRLVLGKFGDLTDNFSSPHARRKVLAGVVMTTGKDAKVISVSTGTKCIGEYMSDRGLALNDCHAEIISRRSLLRFLYTQLELYL-NNKDDQKRSIFQKS-ERGGFRLKENVQFHLYISTSTMSCSDKIARWNVVGIQGSLLSIFVEPIYFSSIILGS--LYHGDHLSRAMYQRIS-NIE-DLPPLYTLNKPLLSGISNAEAR-QPGKAPNFSVNWTVGDSAIEVINATTGKDE--------LGRASRLCKHALYCRWMRVHGKVRSKITKPNVYHESKLAAKEYQAAKARLFTAFIKAGLGAWVEKPTEQDQFSL |
6 | 1zy7A | 0.31 | 0.19 | 5.82 | 1.85 | CEthreader | | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SRQPIPSEGLQLHLPQVLADAVSRLVLGKFGDLTDNFSSPHARRKVLAGVVMTTGTDAKVISVSTGTKCINEYMSDRGLALNDCHAEIISRRSLLRFLYTQLELYL-NNKDDQKRSIFQKSE-RGGFRLKENVQFHLYISTSPMSCSDKIARWNVVGIQGSLLSIFVEPIYFSSIILG--SLYHGDHLSRAMYQRISNIED--LPPLYTLNKPLLSGISNAEARQ-PGKAPNFSVNWTVGDSAIEVINATTGKDE--------LGRASRLCKHALYCRWMRVHGKVPSHLLRSKIYHESKLAAKEYQAAKARLFTAFIKAGLGAWVEKPTEQDQFSL |
7 | 1zy7A | 0.31 | 0.19 | 5.72 | 1.71 | MUSTER | | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SRQPIPSEGLQLHLPQVLADAVSRLVLGKFGDLTDNFSSPHARRKVLAGVVMTTGTDAKVISVSTGTKCINEYMSDRGLALNDCHAEIISRRSLLRFLYTQLELYLN-NKDDQKRSIFQKSE-RGGFRLKENVQFHLYISTSPMSCSDKIARWNVVGIQGSLLSIFVEPIYFSSIILGS--LYHGDHLSRAMYQRISNI--EDLPPLYTLNKPLLSGISNAEARQPG-KAPNFSVNWTVGDSAIEVINATTGKDELGR--------ASRLCKHALYCRWMRVHGKVPSKITKPNVYHESKLAAKEYQAAKARLFTAFIKAGLGAWVEKPTEQDQFSL |
8 | 1zy7A | 0.32 | 0.19 | 5.87 | 8.00 | HHsearch | | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SR-QPIPSE-----------GLQLHLPQVLADAVSRLVLGKFGDLTDNFSSPHARRKVLAGVVMTTGKDAKVISVSTGTKCINGYMSDRGLALNDCHAEIISRRSLLRFLYTQLELYLNNK-DDQKRSIFQKSE-RGGFRLKENVQFHLYISTSPMSCSDKIARWNVVGIQGSLLSIFVEPIYFSSIILGS--LYHGDHLSRAMYQRISNI--EDLPPLYTLNKPLLSGISNAEARQ-PGKAPNFSVNWTVGDSAIEVINATTGKDEL--------GRASRLCKHALYCRWMRVHGKVPSKITKPNVYHESKLAAKEYQAAKARLFTAFIKAGLGAWVEKPTEQDQFSL |
9 | 1zy7A | 0.31 | 0.19 | 5.82 | 3.00 | FFAS-3D | | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SRQPIPSEG-----------LQLHLPQVLADAVSRLVLGKFGDLTDNFSSPHARRKVLAGVVMTTGTDAKVISVSTGTKCINEYMSDRGLALNDCHAEIISRRSLLRFLYTQLELYLN-NKDDQKRSIFQKS-ERGGFRLKENVQFHLYISTSPCSCSDKIARWNVVGIQGSLLSIFVEPIYFSSIILGSL--YHGDHLSRAMYQRISNI--EDLPPLYTLNKPLLSGISNAEARQPG-KAPNFSVNWTVGDSAIEVINATTGKDELGRA--------SRLCKHALYCRWMRVHGKVPSHLTKPNVYHESKLAAKEYQAAKARLFTAFIKAGLGAWVEKPTEQDQFSL |
10 | 1zy7A | 0.28 | 0.16 | 4.97 | 1.38 | EigenThreader | | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SRQPIPSEGLQ------------LHLPQVLADAVSRLVLGKFGDLTDNFSSPHARRKVLAGVVMTTGTDVVISVSTGTKCINGEYMSDRGLALNDCHAEIISRRSLLRFLYTQLELYLNN-KDDQKRSIFQKSE-RGGFRLKENVQFHLYISTSPCGCSDKIARWNVVGIQGSLLSIFVEPIYFSSIILGSLYH--GDHLSRAMY---------QLPPLYTLNKPLLSGISNAEAR-QPGKAPNFSVNWTVGDSAIEVINATTGKDELGRAS-----RLCKHALYCRWMRVHG----------KPNVYHESKLAAKEYQAAKARLFTAFIKAGLGAWVEKPTEQDQFSL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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