Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Download alignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 580 600 620 640 660 680 700 720 740 760 780 800 820
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| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCSSSSSSCCCCCCCCCHHHHCCCCCCSSSCCCCCCCCCCCCCCCCCCCSSSCCCCCCCSCCCCCCCCCCCSSSCCCCCCCCCCCHHHCCCCCSSSCCCCCCCCCCCCCCCCCCCSSSCCCCCCCCCCCCCCCCCCSSSCCCCCCCCCCCCCCCCCCCSSSCCCCCCCCCCCCCCCCCCCSSSCCCCCCCCCHHHHHHCCCCCCCSSSCCCCCCCCCHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSCCCCCCCHHHHHHHHHHCCCSSSCCCCCCCCCCCCCCCCCCSSSSCCHHHHHHHHHCCCCSSSSSSCCCCCCCCHHHHHHHHHHCCSSSSSSSHHHHHHHHHHCCCCSSSSSSCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCSSSSCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MATSERALLRTRAASLLRGLGRSRTGARSLQFRAEKERQPCWSFPMGQKTKGSSNIASSYLLQQLMHRYQELDSDGDEDQGEGEAGSEESSESEMLNLEEEFDGVLREEAVAKALHHLGRSGSGTEQVYLNLTLSGCNLIDVSILCGYVHLQKLDLSANKIEDLSCVSCMPYLLELNASQNNLTTFFNFKPPKNLKKADFSHNQISEICDLSAYHALTKLILDGNEIEEISGLEMCNNLIHLSLANNKITTINGLNKLPIKILCLSNNQIEMITGLEDLKALQNLDLSHNQISSLQGLENHDLLEVINLEDNKIAELREIEYIKNLPILRVLNLLENPIQEKSEYWFFVIFMLLRLTELDQKKIKVEEKVSAVNKYDPPPEVVAAQDHLTHVVNSVMQPQRIFDSTLPSLDAPYPMLILAGPEACGKRELAHRLCRQFSTYFRYGACHTTRPPYFGEGDRVDYHFISQDVFDEMVNMGKFILTFSYGNHKYGLNRDTVEGIARDGLASCIHMEIEGVRSLKYSYFEPRYILVVPMNKEKYEGYLRRKGLFSRAEIEFAVSRVDLYIKINQNFPGYFDEVINADDLDVAYQKLSQLIREYLGLTEEPAKSLATTADVKTSHLKPEAHPTKYISSNMGDFLHSTDRNYLIKFWAKLSAKKTPAERDSIHRQHEAARQALMGRIRPDHTLLFQRGPVPAPLTSGLHYYTTLEELWKSFDLCEDYFKPPFGPYPEKSGKDSLVSMKCSLFRFCPWSKELPFQPPEGSISSHLGSGASDSETEETRKALPIQSFSHEKESHQHRQHSVPVISRPGSNVKPTLPPIPQGRR |
1 | 1lvgA | 0.29 | 0.07 | 2.00 | 1.83 | FFAS-3D | | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PVVLSGPSGAGKSTLLKKLFQEHSSIFGFSVSHTTRNPRPGEEDGKDYYFVTREMMQRDIAAGDFIEHAEFSGNLYGTSKEAVRAVQAMNRICVLDVDLQGVRSIKKTDLCPIYIFVQPPSLDVLEQRLRLRNTETEESLAKRLAAARTDMESS-KEPGLFDLVIINDDLDKAYATLKQALSEEIKKAQ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
2 | 6hluA | 0.19 | 0.16 | 5.07 | 1.13 | SPARKS-K | | -------SDLDVIRQIEQELGMQLEPVDKLKWYSKGYKLDKDQRVTLYDCGSDTLDRIIQPLESL---------------KSLSESNQITDISPLASLNSLSRNQITDAPLASPLESL----KSLTELQLELSLSGNNISDIAPLESLKSLTELSLSSNQITDIAPLASLKSLTELSLSSNQISDIAPLESLKSLTELQLSRNQISDIAPLESLKSLTELQLSSNQITDIAPLASLKSLTELQLSRNQISDIAPLESLNLSKLWLNGNQITDIAPLASLNSLTELELSSNQITDIAPLASLKSLSTLWLSSNQISD---IAPLASLESLSELSLSSNQISDISP-----LASLNSLTGFDVRRNPPETITGFDMEESPPPEIVAVRQYFQSIEEARSKGEA-------LVHLQEIKVHLIGDGMAGKTSLLKQLAPNIKGLCLFHFWDF--------GGQEIMHASHQ--F--FMTRSSVYMLLLDSRTDSNKHLRHIEKYGGKSPVIVVMNKIKSLKSAVLH-PDSIYGTPLAPSKEKLVEATTAQRYLNRTEVEKICNTLLGYLNNLEALD-LSEIYVLD--PHWVTIGVYRIIGYILNEEQKFTYTLLDEGKGLFPTQIDITEGEPLRFIKYDYLPSTIIPRLMIAMQHQILKDSTRCKREYLSIIWYEIKKINAN---------FTNLDVKEFHPDELVEYKELLGLEKMGRDEYVSGK----------LEKVFSVSKMLD----SVISKE---------------------------------------------------------------------- |
3 | 4r5dA | 0.22 | 0.11 | 3.40 | 1.51 | CNFpred | | -----------------------------------------------------------AFAETIKANLKKKSVT--------------------------------DAVTQNELNSID-----------QIIANNSDIKSVQGIQYLPNVRYLALGGNKLHDISALKELTNLGWLNLSNNQLETLPVFEKLTNLTTLNLSNNQLTSLPQGVFLASLTTLNLSNNQLTSLPVFERLTNLTTLNLSNNQLTSLPVFERLTLTTLNLSNNQLTSLPVFERLTSLTTLNLSNNQLTSLPVFERLTNLKTLNLSNNQLTCRAVANALKQAASLHELHLSNNNIGEEGAAELVEALLHSTLETLDLSNCNLT---------------KEACREIARALKQAT---------------TLHELHLSNNN--IGEEGAAELVEALLH-------------------------------------GSTLETLDLSN--CNLTKEACREIARALKQATT-----------------LHELHLSNNN-------------IGEEGAAELVEALLH-------PGSTLETLDLS-TKEACREIARALKQATSLHELHLSNNNIG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
4 | 4mn8A | 0.13 | 0.11 | 3.91 | 0.30 | CEthreader | | GVLSDWTIIGSLRHCNWTGITCDSTGHVVSVSLLEKQLEGVLSPAIANLTYLQVLDLTSNSFTGKIPAEIGKLTELNQLILYLNYFSGSIPSGIWELKNIFYLDLRNNLLSGDVPEEICKT---SSLVLIGFDYNNLTGKIPECLGDLVHLQMFVAAGNHLTGSVSIGTLANLTDLDLSGNQLTGKIDFGNLLNLQSLVLTENLLEGDAEIGNCSSLVQLELYDNQLTGKAELGNLVQLQALRIYKNKLTSSSLFRLTQLTHLGLSENHLVGPEEIGFLESLEVLTLHSNNFTGEQSITNLRNLTVLTVGFNNISGELP-ADLGLLTNLRNLSAHDNLLTGPIP---SSISNCTGLKLLDLSHNQMTGEIPRGFGRMNLTFISIGRNHFTGEI--------------PDDIFNCSNLETLSVADNNLTGTLKPLIGKLQKLRILQVSYNSLTGPIPNILYLHSNGFTGRIPREMSNLTLLQGLRMYSNDLEGPIPEEMFDMKLLSVLDLSNNKFSG--QIPALFSKLESLTYLSLQGNKFNGSIPASLKSLSLLNTFDISDNLLTGTIPGELLASLKNMQLYLNF--SNNLLTGTIPKELG-----KLEMVQEIDLSNNLFSGSIPRSLQACKNVFTLDFSQNNLSGHIPDEVFQGMDMIISLNLSRNSFSGEIPQSFGNMTHLVSLDLSSNNLTGEIPESLANLSTLKHLKLASNNLKGHVPESGVFKNINASDLMGNTDLCG--------------------------------------------------------------------------------- |
5 | 6hluA | 0.15 | 0.11 | 3.80 | 0.85 | EigenThreader | | TDISPLASLNSLSML--WLDRNQITDISLNSLSMLWLFGNKISDISSNQITDI--------------------APLASLKSLTSGNNISDIAPLESLKSSSNQITDIAPLAS---------LKSLTELSL----SSNQISDIAPLESLKSLTELQLSRNQISDIAPLESLKSLTELQLSSNQITDIAPLASLKSLTQLSRNQ--ISDIAPLESLNSLSKLWLNGNQITDIAPLASLNSLTELELSSQITDIAPLASLKSLSTLWLSSNQISDIAPLASLESLSELSLSSNQISDISLASLNSLTGFDVRRNPIKRLPETITG-----FDMEILWNDFSSSGFDN---------------PLESPPPEIVK-------QGKEAVRQYFQSIEEARSK-----------GEALVHLQEIHLIGDGMAGKTSLLKQ----------LIGEGLNVPNIKGLENDDEL--------------KECLFHFWDFGGQEIMHASHQFFMTR--SSVYMLLLDWLRHIEKYGGKSPVIVVMNKIPS----------YNIEQKKINERF------------PAIENRFHRIVESIAKSLKSAVL------------------------------------------HPDSIYG------------TPLAPSWIKVKEKLVEATTAQR-----YLRTEVEKICNDSGITDPGERKTLLGYLNNLG-----IVLYFEALDLSEIYVLD---PHWVTIGVYRIINSSKTKNGALGYILNEEQKFTYTLLEQRYLLDIMKQFELCYDE-------------GKGPSNLPTQIDITEGEP |
6 | 1z6gA | 0.25 | 0.06 | 1.76 | 1.77 | FFAS-3D | | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PLVICGPSGVGKGTLIKKLLNEFPNYFYFSVSCTTRKKREKEKEGVDYYFIDKTIFEDKLKNEDFLEYDNYANNFYGTLKSEYDKAKEQNKICLFEMNINGVKQLKKSTHIKLYIFIKPPSTDVLLSRLLTRNTENQEQIQKRMEQLNIELHEA--NLLNFNLSIINDDLTLTYQQLKNYLNSYIHL------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
7 | 4r5dA | 0.21 | 0.10 | 3.20 | 1.01 | SPARKS-K | | ---------------------------------------------------------------------------------------------ATITVSTPIKQIFPDDAFAETIKANLKKKSVTDAVTQQIIANNSDIKSVQGIQYLPNVRYLALGGNKLHDISALKELTNLGWLNLSNNQLETLPQFEKLTNLTTLNLSNNQLTSLPVFERLASLTTLNLSNNQLTSLGVFERLTNLTTLNLSNNQLTSLGVFERLTLTTLNLSNNQLTSLGVFERLTSLTTLNLSNNQLTSLGVFERLTNLKTLNLSNNQLTKRAVANALKQAASLHELHLSNNNIG--EEGAAELVEALSTLETLDL----------SNCNLT--------KEACREIARALKQATTLHE------------LHLSNNN--IGEEGAAELVEALL----------------HPGSTLETLDLSCREIARALKQATTLHELHLSNNN--IGEEGAAELVEALL---------------HPGSTLET-LDLSNCCREIARALKQATSLHELHLSNNNIG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
8 | 6mkyA | 0.26 | 0.07 | 2.28 | 1.50 | CNFpred | | ---------------------------------------------------------------------------------------------------------------------------------RELDLYDNQIKKIENLEALTELEILDISFNLLRNIEGVDKLTRLKKLFLVNNKISKIENLSNLHQLQMLELGSNRIRAIENIDTLTNLESLFLGKNKITKLQNLDALTNLTVLSMQSNRLTKIEGLQNLNLRELYLSHNGIEVIEGLENNNKLTMLDIASNRIKKIENISHLTELQEFWMNDNLLESWSDLDELKGARSLETVYLERNPLQKDPQYRRKVMLALPSVRQID--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
9 | 5j44A | 0.06 | 0.03 | 1.40 | 0.67 | DEthreader | | -IAYTSGEGVLQWKYDANGTGTLTQGNTTWDLLFTGQFAGDYRVSA------LNGQ---T-WMGGGIITDK---------AGDNLHK-TVNGTGNVILNQQA-GKVQAFSSVGIASGRPT----SWGYRGGRLELNGNNLTFTRLQAADYGAIITNNKSTVTLDLQTQPYMYHGQLNGNMDVNIPQLSDVLALDGSVNLPEGSITKKSGTLIFQGHTRQFTLEKLKLDAATFHL-SRNGKMQGDINATNGSTVILGSSDQSDYSGNVTLENKSSLQI-M-ERFTGGI--EAYDSTVSV-TSQNA-VFDRV-GSFVNS-SL-TLGKGAKLTAQSGIFSTGSTTEGISSDIHAATINLGDSDAAGYNAVLRGSITGAQSTVNMINALWYSDGKSE-----GDGKHFAT---NTTFLMHT--------------------------NN-S--------------------------------RADQ--------------LVDFLNKPASEMSVTLITAPK--F---QTPVISTEK----------------------------TDD---AT-----KWV--------------LT--GY--QTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
10 | 4r5dA | 0.19 | 0.09 | 2.94 | 0.61 | MapAlign | | -----------------------------------------------------------------------------------------------ITVSTPIKQIFPDDAFAETIKANLAVTQNELNSIDQIIANNSDIKSVQGIQYLPNVRYLALGGNKLHDISALKELTNLGWLNLSNNQLETLPGVFELTNLTTLNLSNNQLTSLPVFERLASLTTLNLSNNQLTSLPVFERLTNLTTLNLSNNQLTSLPVFERLNLTTLNLSNNQLTSLPVFERLTSLTTLNLSNNQLTSLPVFERLTNLKTLNLSNNQLTACRAVANALQAASLHELHLSNNNI------GEEGAAELVE--------------------------------------------------ALLHPGSTLETLDLSNCLTKEACREIARALKQAT-TLHELHLSNNN--------------IGEEGAAELVE-------ALLHPGSTL-------------ETLDLSNCCREIARALKQATTLHELHLSNNNI--------------------GEEGAAELVEALLHPGSTLETLDLSN--CNLTKEACREIARALELHLSNNNIG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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