Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 580 600 620
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| SS Seq | CCCCCCCCCCCCCCCCCCSHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSHHHCCCCCCCCSSSSSSSSSSCCCCCCCCSSCCCCCCCCCCCCCCCCCCSSSSCCCCCCCCCCCCCCSSSSSSSSSSCCCCCCCCCCCCSSSSSSSSCCCCCSCCCCSSCCCCCCCCCCCSSHHHHCCCCCCCCCSSSSSSSCCCCCCCCCCCCCCHCHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MDSHSGEPALLPCGTCDMVFRSSALLATHTQRFCIGHPTQEMTFGAQASVATEPQRAAVVPQEHQGVPQEPQGLPDQQASRSALKRLTEEVQWLRLSLQEMRPWITEVPRVFAGPWTRSEARPQSPMSEAVGSPSERLRALFRTRARRVAEMEAQSRALQLRGEELSRRLQVVACTRGGMSRLFGLEQEIRELQAEAGRTRGALEVLGARIQELQAEPGNPLSSRREAELYSPVQKANPGTLAAEIRALREAYIRDGGRDPGVLGQIWQLQVEASALELQRSQTRRGRAGATSGELPVVEAENRRLEAEILALQMQRGRAPLGPQDLRLLGDASLQPKGRRDPPLLPPPVAPPLPPLPGFSEPQLPGTMTRNLGLDSHFLLPTSDMLGPAPYDPGAGLVIFYDFLRGLEASWIWVQLRTGLARDGRDTGRTTALPPALCLPPPPAPGPMGNCAILASRQPVPRLPPSSSVSLVCELQVWQGLAWARAPQPKAWVSLGLFDQDQRVLSGRWRLPLRALPLDPSLSLGQLNGIPQAGQAELFLRLVNARDAAVQTLAEINPASVHEYQYPPPVSSTSSLEASFLTPAVGFADPPPRTEEPLSGVKDRDEGLGPHHSSDLPPVSF |
1 | 6gmhQ | 0.07 | 0.06 | 2.51 | 1.08 | EigenThreader | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-----------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGVEAMQAESCYQLARSFHVQ--------EDYDQAFQYYYQATQFASSSFVLPFFGLGQMYIYRGDPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDDIQGQEKVQADVPPEILNNVGALHFRLGN-----LGEAKKYFLASLDRAKAEAEHDE-------------------------------------------------HYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQSDTYSMLALGNV |
2 | 2pffB | 0.07 | 0.07 | 2.88 | 1.63 | MapAlign | | ---------MDAYSTRPLTLSHGELVGKFLGYFDQVLNLCLTEFENCYLEGNDIHALAAKLLQENDTTLVKTKELIKNYITARVLVGDLIKFSAETLSELIRTTLDAEKVFTQGLNILEWLENPSNTPDKDYLLSIPISCPLIGVIQLAHYVVTAKLLPGELRSSQGLVTAVAIATDSWESFFVSVRKAITVLFFIGVRCQEQVQDYVNKTNSGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--GGGG--GGGGGG-----GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGQGSQEQGMGMDLYKTSKAAQDVWNRADNHFKDTYGFSILD |
3 | 6tpiA | 0.08 | 0.05 | 2.00 | 0.90 | CEthreader | | --------------------------------------------------------------------------------------------------------------------------------------LKSIQADIAAKERAVRQKQQQRASLLAQLKKQEEAISEATRKLRETNTLNQLNKQIDEMNASIAKLEQQKAAQERSLAAQLDAAFRQGEHTGIQLILSGEESQRGQRLQAYFGYLNQARQETIAQLKQTREEVAMQRAELEEKQSEQQTLLYE----QRAQQAKLTQALNERKKTLAGLESSIQQGQQQLSELRANESRLRNSIARAEAAAKARAEREAREAQAVRDRQKEATRKGTTYKPTESEKSLMSRTGGLGAPRGQAFWPV-------------RGPTLHRYGEQLQGELRWKGMVIGASEGTE-------------VKAIADGR--------VILADWL-----------QGYGLVVVVEHGKGDMSLYGYNQSALVSVGSQVRAGQPIALSSGGQGRPSLYFEIRRQGQAVNPQPWLGR-------------------------------------------------------------- |
4 | 6iv6A | 0.06 | 0.05 | 2.37 | 1.00 | EigenThreader | | GYDRLFGAKLFKDGKELGDLAKFVIAQ-----------EGESSPLAHLAHFEKFSTYFTGFHDNRKNMYSDEDKHTA--IAYRLIHLPRFIDNLQILATIKQKHSALYASGLDVSLASHLDGYHKLLTQEGITAYNTLLGGNELINSHHNSEVCQAVNEFVQSLFDGKNLNELSKQAFGDFALLGRVLDGY-----------------------YVDVVNPEFVAHFAKLLTTKTTLHNQDGNFYGEFGALYDELAKIATLYNKVRDYLS---QAELLDKYAQGTHKKGDNFNLKDCHALIDFFKAGINKHREVEPQGAHGKPNLHTLYFKALFSEDNLVNPIGEAEASLDMNETTIHRAGEVLENKNPDNPKRQFVYDIIKDKRYTQDGFKRGCFKVEKQIYQNFENALIKKLNHLV---LKDKADDEIGSYKNALQLTNNFTDLKSIGKQTGFYVPAWNTSKIDPETGFCYNEFHIDYAKFKAKNSRQIWKICS-----HGDKRYVYDKTANQNKGATIGVNVNDELKSLF----------------TRYHINDKQPNLVMDICQNNDKEFHKSLMYLLKTLLALSPVANDEGVFFNSALADDTQPQNDDLNKVKLAIDN |
5 | 5nenA1 | 0.10 | 0.03 | 1.14 | 0.80 | FFAS-3D | | ----------------------------------------------------------------------------QVQAQAQVDSLRDQYYTTLATEGRLLAERD------------GLSIVTFSPILDAVKDKPRVAEIIALQTQLF---ASRRQALQSEIDGYKQSMDG-------------IRFQLKGLQDSRGNKQIQLSSLREQMNSMKQ------------------LAADGYLPRNRYLEVQRQFAEVNSSIDETVGRIGQLQKQLLESQQRIDQRFADYQREVRTQLAQTQMDASEFRNKLQMADFD------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
6 | 6e5oY | 0.12 | 0.11 | 3.86 | 0.90 | SPARKS-K | | QVISNNAANNLRMLLDDYTKMKEAILQVYWQEFFAQPASKKIDQNKLKPEMDEHEKLILLAQDSDEAVTYSLGKFGQRASGPVGKALSDACMGTIASFLSKIIEHQKVVKGNQKRLESLRENLEYPSVTLPPQPHTK------------EGVDAYNEVIARVRMWVNLNLWQPLLRLKGFPSFPVWWNTINEVKKLIDAKRDMGRVFRNTILEGYNPNENDHKKRENPKKPAKR----------QFGDLLLYLEKKY-WGKVFDEAWERIDKKIAGLTSHIEREEARNAEDAQ-----SKAVLTDWLRAKASFVLERLKEMDEKACEIQLQKWYGDLRGNPFAVE-AENRVVDISGFSIGHSIQYRNLLAWKYLEKREFYLKSGKWQGLLYFDPEQLIILPLEFIWNLSLETGLIKLANGRVIEKTIYNK-----------KIGRDEPALFVALTFERREVVDPSNIKPVNLI---GVARGENIP--------AVIALTDPEGCRIGEGYKEQRRAGGYSRKFASKSRNLADDMHDAVLVFAFMTERQYTTAKLAYEGTSKTYLSKTLAQYTSKTCSNCGFTITYADMD----VMLVRLKKTSDGWATTLNNKELKAEYQIT |
7 | 5j1gA | 0.13 | 0.04 | 1.45 | 0.74 | CNFpred | | --------------------------------------------------------------------------------ISELKDIRLQLEACETRTVHRLRLPLDK----------------------------EPARECAQRIAEQQKAQAEVEGLGKGVARLSAEAEKVLALPEPSPAAPTLRSELELTLGKLEQVRSLSAIYLEKLKTISLVIRGT-------------------GAEEVLRAHEEQLKEA-ATLPELEATKASLKKLRAQAEAQQ------------PTFDALRDELRGAQEVGERLQQRHGER---DVEVERWRERVAQLLERWQA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
8 | 6w1sI | 0.06 | 0.03 | 1.45 | 0.50 | DEthreader | | LIERWGDLVQVERYHSLSLSVW---KVTIKIPLQIFHDPPLAMKKDSARQRLELKAIL---------------------------KSLNDDMKRIIPWIQQLKFWLGQQRCKQSIKHLPTIT--------------FIKLTRLPQ-YI--V---------------------------------------------KPTQLSYCAFNKVLAHFVAMC--N--------------------------------VEGGHAIRLLKIPPC-----------------------------ISEETQKALDRSLLDELVFSRHVYLTYVVMFLNDWSSIRLYECWHQKFHIANTL-TVPMLGLT-----------------Q-RTNTAYQCFSILPQSTHIRLAFRNMYC-----------IDIYCRSRGVVAIRDGYSFDNSKL-----------GFYPAP-----------NMFVD-RSWA-------------------ALN--LLPSCSPLEFSVRRQRIQQETLQLVIMFDALKCRVALS--------------------------PKTNQTLQLEDELILR--------------------QQ-------------ILKRF |
9 | 7b0yB | 0.06 | 0.05 | 2.36 | 1.55 | MapAlign | | --MATNTVYVFAKKYAYTGECRSCRPTSTIWVSMLARVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEMVKPSLQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGKDFNLELAI--KTRIISDGLKYSLATGNW---------GDQKKAHQARAGVSQVLNRLTFASTLSHLCPAETPEGHAVGLVKNILEFLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRKRHIDQLKEREYNNYSWQDLVASAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIVAIASYTGYNQEDSVIMNSYKEQDDGLIAPGVVIGKTVTLPRYTKRDCSTFLVDQVMVTLNQEGYKFCKIRVDIIINPHAIPSRMTIGHLIECNEVLYNGFTGRKIQIFIGRQPMEGRSRDGGPYQVHVCNLCGIMAIANTRTHTYECRGCRNQISLVRMPYACKLLFQELMSMSIAPRMMSV-------------------------------------------------------- |
10 | 6e5oY | 0.11 | 0.11 | 3.97 | 0.75 | MUSTER | | LKPEMDEKGYTN-GRCNVAEHEKLILLAQLKPVKDSDEAVTYSLGKFGQRALDFYSIHVTKESTHPVKPLAQIAGNRYASGPVGKALSDACMGTIASFLSKYQDIIIEHQKVQKRLESLRENLEYPSVTLPPQPHT--KEGVDAYNEVIARVRMWVNLNLWQKLDDAKPLLRLKGFPSVVRREVDWWNTINEVKKLIDAKRDMGRVFWSKRNTILEGYNYLPNENDHKKRENPKKPAK-RQFGDLLLYLEKKY-------KVFDEAWERIDKKIAGLTSHIEREEARNAEDAQSKAVLTDWLRAKASFVLERLKEMDEKEACEIQLQKWYGDLRGNPFAVEAENRVSIQYRNLLAWKYLEKKGRIRFTDGTDIKKSGKWLLYGGGKAKVIDFDPDDEQLIILPLAFGTRQGREFINDLLSLETGLIKLANGRVIEKTIYNKKIGRDEPALFVALTFERREVVDPSNIKPVNLIGVARGENIPAVIALTDPEGPLRIG-IQAAKEVEAGGYSRKFAS--LADDMSARDLFYHAVTHDAVLVFAFMTERQTKMEDWLT---AKLAYEGLTSKTYLSKTLAQSKTCSNCGFTITYADMDVMLVRLKKTSDGWANNKEL-KAEYQI |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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