Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380
| | | | | | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCSSCCCCCCCCCCCCSSSSSSCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHCCCSSSHHHHCHHHHHHHHHHHHHHCCCCSSSSCCCCCCCCCCCCCCCCCSSSSSSSCCCSSSSSSSSSSCCCCCCCCCCCCHHHHHHHCCCCCSSSSSSSSSCCCCCCCCCCCCCCCCCCSSSSSSSSCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCSSSSCCCCCCCCCHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSSSCCCSSSSSSSCCCCHHHHHHCCCCCCCCCCCCCCCCSSSSSSSSSCCCCCCCCCCCCCCCC HPEQLPPRPWITLKERDQILPSASFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEIVNCDADIISLQEVETEQYFTLFLPALKERGYDGFFSPKSRAKIMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQVAMANSDGSEAMLNRVMTKDNIGVAVVLEVHKELFGAGMKPIHAADKQLLIVANAHMHWDPEYSDVKLIQTMMFVSEVKNILEKASSRPGSPTADPNSIPLVLCADLNSLPDSGVVEYLSNGGVADNHKDFKELRYNECLMNFSCNGKNGSSEGRITHGFQLKSAYENNLMPYTNYTFDFKGVIDYIFYSKTHMNVLGVLGPLDPQWLVENNITGCPHPHIPSDHFSLLTQLELHPPLLPLVNGVHLPNRR |
1 | 3ngnA | 0.91 | 0.74 | 20.92 | 1.33 | DEthreader | | -----LPPRPWITL-KE-R-DSASFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEIVNCDADIISLQEVETEQYFTLFLPALKERGYDGFFSPKSRAKIMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQVAMSGSEAMLNRVMTK--D-NIGVAVVLEVHKE-L---F-------KQLLIVANAHMHWDPEYSDVKLIQTMMFVSEVKNILEKA----------S--IPLVLCADLNSLPDSGVVEYLSNGGVADNHKDF-K-E-------------------RITHGFQLKSAYENNLMPYTNYTFDFKGVIDYIFYSKTHMNVLGVLGPLDPQWLVENNITGCPHPHIPSDHFSLLTQLELHP--------------- |
2 | 3ngnA | 1.00 | 0.83 | 23.13 | 2.31 | SPARKS-K | | ----LPPRPWITLKERD----SASFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEIVNCDADIISLQEVETEQYFTLFLPALKERGYDGFFSPKSRAKIMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQVAMANSDGSEAMLNRVMTKDNIGVAVVLEVHKELF-----------KQLLIVANAHMHWDPEYSDVKLIQTMMFVSEVKNILEKA------------SIPLVLCADLNSLPDSGVVEYLSNGGVADNHKDFK---------------------ERITHGFQLKSAYENNLMPYTNYTFDFKGVIDYIFYSKTHMNVLGVLGPLDPQWLVENNITGCPHPHIPSDHFSLLTQLELHP--------------- |
3 | 3ngnA | 0.99 | 0.82 | 22.99 | 1.45 | MapAlign | | ----LPPRPWITLKER----DSASFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEIVNCDADIISLQEVETEQYFTLFLPALKERGYDGFFSPKSRAKIMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQVAMANSDGSEAMLNRVMTKDNIGVAVVLEVHKELF-----------KQLLIVANAHMHWDPEYSDVKLIQTMMFVSEVKNILEKA------------SIPLVLCADLNSLPDSGVVEYLSNGGVADNHKDF---------------------KERITHGFQLKSAYENNLMPYTNYTFDFKGVIDYIFYSKTHMNVLGVLGPLDPQWLVENNITGCPHPHIPSDHFSLLTQLELHP--------------- |
4 | 3ngnA | 0.99 | 0.82 | 23.06 | 1.05 | CEthreader | | ----LPPRPWITLKER----DSASFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEIVNCDADIISLQEVETEQYFTLFLPALKERGYDGFFSPKSRAKIMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQVAMANSDGSEAMLNRVMTKDNIGVAVVLEVHKELF-----------KQLLIVANAHMHWDPEYSDVKLIQTMMFVSEVKNILEKA------------SIPLVLCADLNSLPDSGVVEYLSNGGVADNHKDFK---------------------ERITHGFQLKSAYENNLMPYTNYTFDFKGVIDYIFYSKTHMNVLGVLGPLDPQWLVENNITGCPHPHIPSDHFSLLTQLELHP--------------- |
5 | 3ngnA | 0.99 | 0.82 | 23.06 | 1.87 | MUSTER | | ----LPPRPWITLKER----DSASFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEIVNCDADIISLQEVETEQYFTLFLPALKERGYDGFFSPKSRAKIMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQVAMANSDGSEAMLNRVMTKDNIGVAVVLEVHKELF-----------KQLLIVANAHMHWDPEYSDVKLIQTMMFVSEVKNILEKAS------------IPLVLCADLNSLPDSGVVEYLSNGGVADNHKDFK---------------------ERITHGFQLKSAYENNLMPYTNYTFDFKGVIDYIFYSKTHMNVLGVLGPLDPQWLVENNITGCPHPHIPSDHFSLLTQLELHP--------------- |
6 | 3ngnA | 0.98 | 0.82 | 22.86 | 2.90 | HHsearch | | ----LPPRPWITLKERD----SASFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEIVNCDADIISLQEVETEQYFTLFLPALKERGYDGFFSPKSRAKIMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQVAMANSDGSEAMLNRVMTKDNIGVAVVLEVHKE-----------LFKQLLIVANAHMHWDPEYSDVKLIQTMMFVSEVKNILEK------------ASIPLVLCADLNSLPDSGVVEYLSNGGVADNHKDF---------------------KERITHGFQLKSAYENNLMPYTNYTFDFKGVIDYIFYSKTHMNVLGVLGPLDPQWLVENNITGCPHPHIPSDHFSLLTQLELHP--------------- |
7 | 3ngnA | 0.98 | 0.81 | 22.58 | 3.30 | FFAS-3D | | -PP----RPWITLK----ERDSASFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEIVNCDADIISLQEVETEQYFTLFLPALKERGYDGFFSPKSRAKIMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQVAMANSDGSEAMLNRVMTKDNIGVAVVLEVHKEL-----------FKQLLIVANAHMHWDPEYSDVKLIQTMMFVSEVKNILEK------------ASIPLVLCADLNSLPDSGVVEYLSNGGVADNHKDF---------------------KERITHGFQLKSAYENNLMPYTNYTFDFKGVIDYIFYSKTHMNVLGVLGPLDPQWLVENNITGCPHPHIPSDHFSLLTQLELHP--------------- |
8 | 3ngnA | 0.86 | 0.71 | 19.88 | 1.65 | EigenThreader | | ----LPPRPWITL----KERDSASFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEIVNCDADIISLQEVETEQYFTL-FLPALKERGYDGFFKSRAKIMS-EQERKHVDGCAIFFKTEKFTLVQKHTVEFNQVAMANSDGSEAMLNRVMTKDNIGVAVVLEVH-----------KELFKQLLIVANAHMHWDPEYSDVKLIQTMMFVSEVKNILEKA------------SIPLVLCADLNSLPDSGVVEYLSNG--------------------GVADNHKDFKERITHGFQ-LKSAYENNLMPYTNYTFDFKGVIDYIFYSKTHMNVLGVLGPLDPQWLVENNITGCPHPHIPSDHFSLLTQLELHP--------------- |
9 | 3ngqA | 1.00 | 0.85 | 23.92 | 3.47 | CNFpred | | ----LPPRPWITLKERD--LPSASFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEIVNCDADIISLQEVETEQYFTLFLPALKERGYDGFFSPKSRAKIMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQVAMANSDGSEAMLNRVMTKDNIGVAVVLEVHKELF-----------KQLLIVANAHMHWDPEYSDVKLIQTMMFVSEVKNILEK-------------SIPLVLCADLNSLPDSGVVEYLSNGGVADNHKDFK-----ECLMNFSC-------EGRITHGFQLKSAYENNLMPYTNYTFDFKGVIDYIFYSKTHMNVEGVLGPLDPQWLVENNITGCPHPHIPSDHFSLLTQLELHPP-------------- |
10 | 4z0vA | 0.28 | 0.23 | 6.95 | 1.17 | DEthreader | | GPGTCTFDHRHLY------TEDALIRTVSYNILADTYAQTFSLYPCAPYALELDYRQNLIQKELTGYNADVICLQEVDRAVFSDSLVPALEAFGLEGVFRIK--Q----------HEGLATFYRKSKFSLLSQHDISFYEALELLYPSAQ-EK--VLQRSSVLQVSVLQSTK---------DS---SKRICVANTHLYWHPKGGYIRLIQMAVALAHIRHVSCDLYP--------G--IPVIFCGDFNSTPSTGMYHFVINGSIPEDHEDWASGE-ERC------------N-MSLTHFFKLKSACG--EPAYTNYVGGFHGCLDYIFIDLNALEVEQVIPLPSHEEVT--THQALPSVSHPSDHIALVCDLKWK---------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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