>Q96KK5 (128 residues) MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK TESHHKAK |
Sequence |
20 40 60 80 100 120 | | | | | | MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKTESHHKAK |
Prediction | CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCSCHHHHHHCCCCCHHHHHHHCCCSSCCCCCCCCCCHHHCCCCCCCCCCCC |
Confidence | 99888887654445555333456436669999998717542024655258999999999999999864554314776102377763124768999986687144788689876544455457777789 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 | | | | | | MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKTESHHKAK |
Prediction | 74544574665465555445444131325303410443443442443233001101331133034224432463554302233132424436303501561314534232434542144357656788 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 | | | | | | | |||||||||||||
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SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCSCHHHHHHCCCCCHHHHHHHCCCSSCCCCCCCCCCHHHCCCCCCCCCCCC MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKTESHHKAK | |||||||||||||||||||
1 | 4khaA | 0.17 | 0.14 | 4.64 | 1.00 | DEthreader | ---TTECLITLVEWAHLERDEGPLESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVR-L-LLPGLAKHAVSEGTKVTYTSA--------------- | |||||||||||||
2 | 1kx5C | 0.93 | 0.92 | 25.88 | 2.05 | SPARKS-K | -SGRGKQGGKTRAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGRVTIAQGGVLPNIQSVLLPKKTESSKSKS | |||||||||||||
3 | 2f8nG | 0.68 | 0.54 | 15.35 | 1.13 | MapAlign | ---------------TSRSAKAGVIFPVGRMLRYIKKGHPKYRIGVGAPVYMAAVLEYLTAEILELAVNAARDNKKGRVTPRHILLAVANDEELNQLLKGVTIASGGVLPNIHPELL----------- | |||||||||||||
4 | 2f8nG | 0.66 | 0.55 | 15.82 | 0.92 | CEthreader | ------------STKTSRSAKAGVIFPVGRMLRYIKKGHPKYRIGVGAPVYMAAVLEYLTAEILELAVNAARDNKKGRVTPRHILLAVANDEELNQLLKGVTIASGGVLPNIHPELLAKK-------- | |||||||||||||
5 | 1kx5C | 0.93 | 0.92 | 25.88 | 2.98 | MUSTER | -SGRGKQGGKTRAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGRVTIAQGGVLPNIQSVLLPKKTESSKSKS | |||||||||||||
6 | 1kx5C | 0.93 | 0.92 | 25.88 | 3.66 | HHsearch | -SGRGKQGGKTRAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGRVTIAQGGVLPNIQSVLLPKKTESSKSKS | |||||||||||||
7 | 1kx5C | 0.94 | 0.93 | 26.09 | 2.46 | FFAS-3D | -SGRGKQGGKTRAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGRVTIAQGGVLPNIQSVLLPKKTSSKSKSK | |||||||||||||
8 | 1kx5C | 0.93 | 0.92 | 25.88 | 1.05 | EigenThreader | -SGRGKQGGKTRAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGRVTIAQGGVLPNIQSVLLPKKTESSKSKS | |||||||||||||
9 | 1eqzA | 0.97 | 0.95 | 26.50 | 1.24 | CNFpred | -SGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKTDSHKA-- | |||||||||||||
10 | 1kx5C | 0.78 | 0.62 | 17.68 | 1.00 | DEthreader | SGRGKQG--GKTRAKKTRSSRAGLQFPVGRVHRLLRGNYAER-VGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGRVTI-AQG--------------------- | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |