>Q96IK1 (185 residues) MADGGGGGGTGAVGGGGTSQASAGAATGATGASGGGGPINPASLPPGDPQLIALIVEQLK SRGLFDSFRRDCLADVDTKPAYQNLRQKVDNFVSTHLDKQEWNPTMNKNQLRNGLRQSVV QSGMLEAGVDRIISQVVDPKLNHIFRPQIERAIHEFLAAQKKAAVPAPPPEPEGQDPPAP SQDTS |
Sequence |
20 40 60 80 100 120 140 160 180 | | | | | | | | | MADGGGGGGTGAVGGGGTSQASAGAATGATGASGGGGPINPASLPPGDPQLIALIVEQLKSRGLFDSFRRDCLADVDTKPAYQNLRQKVDNFVSTHLDKQEWNPTMNKNQLRNGLRQSVVQSGMLEAGVDRIISQVVDPKLNHIFRPQIERAIHEFLAAQKKAAVPAPPPEPEGQDPPAPSQDTS |
Prediction | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC |
Confidence | 99888988765567887676666642356657899987784458999959999999999951747899999986542373689999999999999997357899754789999999999622651455999999985101023458999999999981485212468987777899999887899 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 | | | | | | | | | MADGGGGGGTGAVGGGGTSQASAGAATGATGASGGGGPINPASLPPGDPQLIALIVEQLKSRGLFDSFRRDCLADVDTKPAYQNLRQKVDNFVSTHLDKQEWNPTMNKNQLRNGLRQSVVQSGMLEAGVDRIISQVVDPKLNHIFRPQIERAIHEFLAAQKKAAVPAPPPEPEGQDPPAPSQDTS |
Prediction | 74544443232213334444344343444533556434133442444234004300530464130450254014414554415404430452045205646144635454126503530365731440033004411546235403530451035114254765474564557656344456658 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
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SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC MADGGGGGGTGAVGGGGTSQASAGAATGATGASGGGGPINPASLPPGDPQLIALIVEQLKSRGLFDSFRRDCLADVDTKPAYQNLRQKVDNFVSTHLDKQEWNPTMNKNQLRNGLRQSVVQSGMLEAGVDRIISQVVDPKLNHIFRPQIERAIHEFLAAQKKAAVPAPPPEPEGQDPPAPSQDTS | |||||||||||||||||||
1 | 2kphA | 0.09 | 0.06 | 2.49 | 0.43 | CEthreader | MKDLSINFGKALDTCKKELDLPDSINEDFYKFWKEDYEITNRLT----GCAIKCLSEKLEMVDADGKLHHGAREFAMKHGADDAMAKQLVDLIHGCEKSIPPND--DRCMEVLSIAMCFKKE-IHNLKWAPNMEVVVGEVLAEV----------------------------------------- | |||||||||||||
2 | 2w6dA2 | 0.03 | 0.03 | 1.81 | 0.75 | EigenThreader | SSGKREAFNAALQKAFEQYITDKSAAFKELSRSASQYGASYNQITDQITEKLTGWAKWAMGLLSAGFKNILLNYFTVI--GIGGIITAVTGILLGPGLGVGFLQADQARRELVKTAKKELVKHLPQVAHEQSQVYNAVKECFDSYEREVSKRINDDIVSRKSELDNLVKQKQTR----------- | |||||||||||||
3 | 3jckA | 0.18 | 0.16 | 5.26 | 0.70 | FFAS-3D | ---GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTAEINCFMHLLVQLFLWDSKELEQLVEPNLLCYYNLRSLNLINAKLWFYIYLSHETLARSSEENSDNQNIILRSTMMK--FLKIASLKHDNETKAMLINLILRDFLNDSASDFISKLEYPHTDVS----------------- | |||||||||||||
4 | 5cwjA | 0.08 | 0.06 | 2.57 | 0.64 | SPARKS-K | -----------------------DSEEEQERIRRILKEARKSGTEESLRQAIEDVAQLAKKSQDLEEAIRVILRIAKESGS-EEALRQAIRAVAEIAKEAQ-----DLEEAIRVILRIAKESGSALRQAIRAVAEIAKEAQDPRVLEEAIRVIRQIAEESGSEEARRQAERAEEEIRRRAQ---- | |||||||||||||
5 | 1u6gA | 0.07 | 0.04 | 1.59 | 0.51 | CNFpred | ------------------------------------------------LEIFHTEFQNLLDADKNEDLGYNLVSRIQ--DGLGELKKLLETHIHNQGLAAIEK---CGEAALNDPKMYVQTVLDVHKKYNALVMSAFNN--DAGFVAALDKACGRFINNN------------------------- | |||||||||||||
6 | 2j69A | 0.06 | 0.05 | 2.10 | 0.83 | DEthreader | QV------Q-LTLLQIILRLFPKFDSTFTRAIARQRT----F--ITDINAAFKGAGFDWK--NILLNYFTVIGIGGI----TA-VTGILLGPIGFALLGLGVLQDQAR-RELVKTAKKELVK--HLPQVAHEQS-QVV--YN-AVKECFDSYERE--VSKRINIVKSDNVKQKQT---------- | |||||||||||||
7 | 6ql4A2 | 0.10 | 0.10 | 3.61 | 0.63 | MapAlign | GRLAATVAASAIQQHVEKLLDKSSFAKHPSARKVISDAAATVLADRS-YATSDGIEISLKPYDIPNEWAQGREHVV--GVLQAELEQCQAALENSVLKEVPSGAGGFSAALLARGREAVFLRDRADILSLRIQAAKCPEVFLDAVATKLAQTAVLFLNVELNDFYVRFPREVEAKLHEHHAGGGL | |||||||||||||
8 | 2ex3B | 0.16 | 0.16 | 5.20 | 0.52 | MUSTER | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGANMRYQFEKNAYGSKAKIAEIERNTKEVQRLVDEKIKAMKDRPHDFDFSKVYSRLRTLEESMEMRDPQYYEKKMIQLQLNFIKSVEGSFNSFDAADELIEELKKP------PDDFYELFLRISEISGNTVENVEGNYKILSYLEQYRRGDF | |||||||||||||
9 | 3jckA | 0.20 | 0.18 | 5.72 | 1.05 | HHsearch | ---GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTAEINCFMHLLVQLFLWDSKELEEFNRKVVCYYNL-RSLNLINAKLWFYIYLSHETLRSSEEINSDNQNIILRSTMMKFASLKETKAMLINLILR----DFLNNGEVDSASDFISKLEY---------PHT-DVSAPHNSSL | |||||||||||||
10 | 7lo5A3 | 0.08 | 0.06 | 2.52 | 0.39 | CEthreader | -------------------------------------------EPPQVLEFRKAVDHFKDEMPHLLKILREAADAAEQKADYRGERDHFVEIAKEAINPDFSPRDAREMLIQHILTGDLFTSVNIAQQLQQLAATFYKGPVKRDIAERTKRYYGAIQAAAAQIADHHEKQRFLKALYENFYRAYN | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |