>Q96HH6 (113 residues) RPISPWRWLFSVVVPVLIVSNGLKKKSLDHSGALGGLVVGFILTIANFSFFTSLLMFFLS SSKLTKWKGEVKKRLDSEYKEGGQRNWVQVFCNGAVPTELALLYMIENGPGEI |
Sequence |
20 40 60 80 100 | | | | | RPISPWRWLFSVVVPVLIVSNGLKKKSLDHSGALGGLVVGFILTIANFSFFTSLLMFFLSSSKLTKWKGEVKKRLDSEYKEGGQRNWVQVFCNGAVPTELALLYMIENGPGEI |
Prediction | CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCHHHHHHHCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC |
Confidence | 99988899999999999999999976699879999999999999712899999999999988999732999987142332279888899998439999999999982898889 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 | | | | | RPISPWRWLFSVVVPVLIVSNGLKKKSLDHSGALGGLVVGFILTIANFSFFTSLLMFFLSSSKLTKWKGEVKKRLDSEYKEGGQRNWVQVFCNGAVPTELALLYMIENGPGEI |
Prediction | 85343331232233133213303334303330232133013203334433222133333322301323463156245636664414230010113212210111013443455 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 | | | | | | |||||||||||||
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SS Seq | CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCHHHHHHHCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC RPISPWRWLFSVVVPVLIVSNGLKKKSLDHSGALGGLVVGFILTIANFSFFTSLLMFFLSSSKLTKWKGEVKKRLDSEYKEGGQRNWVQVFCNGAVPTELALLYMIENGPGEI | |||||||||||||||||||
1 | 4u5aA | 0.07 | 0.06 | 2.57 | 1.00 | DEthreader | FKLSDDFSNDINATKQTIKDLFLDIEAVLSKYSFVPEEKLNIIDLVCLKKLNSLIQINELNKSHIILKYGE-----RVSELI--IT-PIY-DDFIKNLTDLINDLQI-KLK-- | |||||||||||||
2 | 2nuuD | 0.14 | 0.13 | 4.54 | 0.62 | CEthreader | ANEIAALAFVNTVVATAAAILGWIFGEGACSGAIAGLVGVTPACGIGVGGALIIGVVAGLAGLWGVTMLKRLLRVDDPCDVFGVHG-----VCGIVGCIMTGIFAASSLGGVG | |||||||||||||
3 | 3kdpA4 | 0.10 | 0.10 | 3.63 | 0.68 | EigenThreader | EGRLIFDNLKKSIAYTLTSNIPEITLPLGTVTILTDMVPAISLAQLISMAYGQIGMIQALGGFFTYFVILAEEQRKIVEFTCHTPFFVTIVVVQWADLVICKLIIRRRPGGWV | |||||||||||||
4 | 5xj5A2 | 0.08 | 0.05 | 2.12 | 0.64 | FFAS-3D | --------SVALFSFLVWLGIFLWKRYVSLASITATISAFLFLFVAGYPVNVLFMAIVIGALIIYRHRENINRLLTGREHRFGTLE--------------------------- | |||||||||||||
5 | 3p5nA | 0.05 | 0.05 | 2.43 | 0.81 | SPARKS-K | LATFTFGPVAGIIVALVKNLLNYLFSMGDPVGPFANFLAGASFLLTAYAIYSLITGLIIATIVMTIVLSILNYFVLLPLYGMKVIVSGIIPFNIIKGIVISIVFILLYRRLAN | |||||||||||||
6 | 3rkoC | 0.07 | 0.07 | 2.88 | 0.82 | CNFpred | SSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWL----AQTDIKRLIAYTSVSHMGFVLIAIYTGSQLA | |||||||||||||
7 | 4widA | 0.03 | 0.03 | 1.60 | 1.00 | DEthreader | SLLLDKLKTPFQD-MRCLFEANMVLKQIVQYAVNSS-SL-EKFVLMPITMLSDQVRVLILYLIDEIVHAIHTNS--Q--DELIDLK-PKVRIVINEFHATLMMG--IDK--M- | |||||||||||||
8 | 2nuuD | 0.14 | 0.13 | 4.55 | 0.74 | MapAlign | --EIAALAFVNTVVATAAAILGWIFGEGACSGAIAGLVGVTPACYIGVGGALIIGVVAGLAGLWGV--TMLKRLLRVDDPCDVFGVHGVCGIVGCIMTGIFALGGVGFAEGVT | |||||||||||||
9 | 6eznF | 0.07 | 0.07 | 2.89 | 0.54 | MUSTER | QPVSFFDTHFLIWLFPAGVFLLFLDLKDEHVFVIAYSVLCSYFAGVMLMLTLTPVICVSAAVALSKIFDIYLDFKIKPAALLAK--LIVSGSFIFYLYLFVFHSTWVTRTAYS | |||||||||||||
10 | 3dh4A | 0.13 | 0.12 | 4.33 | 0.90 | HHsearch | GIGQAFQYIQGLVSPLAVFLLGLFWKKTTSKGAIIGVVASIPFLFMSLYTLLFTMVVIAFTSLSTSINDDDPKGISVTSSMFVTDRSFNIAAYGIMIVLAVLYTLFWVLYK-- | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |