Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360
| | | | | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCHCCCCCC MLGSRAAGFARGLRALALAWLPGWRGRSFALARAAGAPHGGDLQPPACPEPRGRQLSLSAAAVVDSAPRPLQPYLRLMRLDKPIGTWLLYLPCTWSIGLAAEPGCFPDWYMLSLFGTGAILMRGAGCTINDMWDQDYDKKVTRTANRPIAAGDISTFQSFVFLGGQLTLALGVLLCLNYYSIALGAGSLLLVITYPLMKRISYWPQLALGLTFNWGALLGWSAIKGSCDPSVCLPLYFSGVMWTLIYDTIYAHQDKRDDVLIGLKSTALRFGENTKPWLSGFSVAMLGALSLVGVNSGQTAPYYAALGAVGAHLTHQIYTLDIHRPEDCWNKFISNRTLGLIVFLGIVLGNLWKEKKTDKTKKGIENKIEN |
1 | 4od4A | 0.22 | 0.16 | 4.94 | 1.00 | DEthreader | | ----------------------------------------------------------------------------LVRIE-H--TIFSLPFAYVGALLSRY--P-FTLADAILMAAAVVGLRMAGMAYNNIADLDIDRLNPRTAKRPLVVGAVSLREAWALVAAGSAIYFASAALLNTYALLLSPLVLAIALTYPHAKRLHPLPHLHLGIVLGSVVFGGAVAASGAVLRSVPWLYVAAVSLWVAGFDTIYSIMDIDFDRSHGLGSIPALLGPGALAASLAMHAAAVALFIAGVEAYGLGAIATVSTALTALVIILVQAMAWL-G--RVKESFNLNLAVPIIIGAGIIVDML------------------- |
2 | 7bpuA | 0.16 | 0.12 | 3.94 | 2.26 | SPARKS-K | | -------------------------------------------------------------------MEKLKTYLELIR---VKNCITASIGGIIGYLISSNFE--IDILKSLLVFFVVFFVCAYGNVINDIFDIEIDRINKP--SRPLPSGKIKLNEAKKFSAILLILGLVLSLFINIYALIIAVINALFLYLYAKYKKYKPIGNFIIGYLTGSVFLFGGVAGKN---VMPVVILFLCSLLSIWGREIVKDFEDMEGDKKEGVISLPIKYGKKSLYFATFLVVLAVILSPLPYILKIFGIWYLILIAICDILFIYAMALLLKEPASKVSKFLKIIMNIVLLAFIVGAIKL-------------------- |
3 | 7bpuA | 0.17 | 0.13 | 4.16 | 1.53 | MapAlign | | ----------------------------------------------------------------------LKTYLELIRV---KNCITASIGGIIGYLISSNF--EIDILKSLLVFFVVFFVCAYGNVINDIFDIEIDR--INKPSRPLPSGKIKLNEAKKFSAILLILGLVLSLFINIYALIIAVINALFLYLYAKYKKYKPIGNFIIGYLTGSVFLFGGVAGKN-V--MPVVILFLCSLLSIWGREIVKDFEDMEGDKKEGVISLPIKYGKKSLYFATFLVVLAVILSPLPYILKIFGIWYLILIAICDILFIYAMALLEP-NKETASKVSKFLKIIMNIVLLAFIVGAIKL----------------- |
4 | 7bpuA | 0.17 | 0.13 | 4.17 | 1.11 | CEthreader | | -------------------------------------------------------------------MEKLKTYLELIR---VKNCITASIGGIIGYLISSNFE--IDILKSLLVFFVVFFVCAYGNVINDIFDIEIDRIN--KPSRPLPSGKIKLNEAKKFSAILLILGLVLSLFINIYALIIAVINALFLYLYAKYKKYKPIGNFIIGYLTGSVFLFGGVAGKNV---MPVVILFLCSLLSIWGREIVKDFEDMEGDKKEGVISLPIKYGKKSLYFATFLVVLAVILSPLPYILKIFGIWYLILIAICDILFIYAMALLLEPNKETASKVSKFLKIIMNIVLLAFIVGAIKL----------------- |
5 | 4od4A | 0.22 | 0.16 | 5.09 | 1.49 | MUSTER | | ----------------------------------------------------------------------------LVRI----EHTIFSLPFAYVGALLSRYP--FTLADAILMAAAVVGLRMAGMAYNNIADLDIDRLNPRTAKRPLVVGAVSLREAWALVAAGSAIYFASAALLNTYALLLSPLVLAIALTYPHAKRLHPLPHLHLGIVLGSVVFGGAVAASGDEARSVPWLYVAAVSLWVAGFDTIYSIMDIDFDRSHGLGSIPALLGPKALAASLAMHAAAVALFIAGVEAYGLGAIATVSTALTALVIILVQAMAWLGR---VKESFNLNLAVPIIIGAGIIVDML------------------- |
6 | 4od4A | 0.23 | 0.16 | 5.16 | 4.75 | HHsearch | | ----------------------------------------------------------------------------LVRIEH---TIFSLPFAYVGALLSR--YP-FTLADAILMAAAVVGLRMAGMAYNNIADLDIDRLNPRTAKRPLVVGAVSLREAWALVAAGSAIYFASAALLNTYALLLSPLVLAIALTYPHAKRLHPLPHLHLGIVLGSVVFGGAVAASGDERSVP-WLYVAAVSLWVAGFDTIYSIMDIDFDRSHGLGSIPALLGPKGALAASLAMHAAAVALFIAGVEYGLGAIATVSTALTALVIILVQA-MA--WLGRVKESFNLNLAVPIIIGAGIIVDML------------------- |
7 | 4od4A | 0.24 | 0.17 | 5.30 | 2.91 | FFAS-3D | | -------------------------------------------------------------------------------LVRIEHTIFSLPFAYVGALLS---RYPFTLADAILMAAAVVGLRMAGMAYNNIADLDIDRLNPRTAKRPLVVGAVSLREAWALVAAGSAIYFASAALLNTYALLLSPLVLAIALTYPHAKRLHPLPHLHLGIVLGSVVFGGAVAASGDEASSVPWLYVAAVSLWVAGFDTIYSIMDIDFDRSHGLGSIPALLGPKGALAASLAMHAAAVALFIAGVAYGLGAIATVSTALTALVIILVQAMAWLGRVK---ESFNLNLAVPIIIGAGIIVDML------------------- |
8 | 7bpuA | 0.13 | 0.10 | 3.44 | 1.58 | EigenThreader | | ------------------------------------------------------------------MEKLKTYLELIR----VKNCITASIGGIIGYLISSN--FEIDILKSLLVFFVVFFVCAYGNVINDIFDIEIDR--INKPSRPLPSGKIKLNEAKKFSAILLILGLVLSLFINIYALIIAVINALFLYLYAKKYKKYKPIGNFIIGYLTGSVFLFGGVAGKNVM--PVVILFLCSLLSIWGREIVKDFEDMEGDKKEGVISLPIKYGKKSLYFATFLVVLAVILSPLPYILKIFGIWYLILIAICDILFIYAMALLLKENKETASKVSKFLKIIMNIVLLAFIVGAIKL----------------- |
9 | 6m34A | 0.17 | 0.12 | 4.09 | 1.68 | CNFpred | | ----------------------------------------------------------------------LKTYLELIRV---KNCITASIGGIIGYLISSNFE--IDILKSLLVFFVVFFVCAYGNVINDIFDIEIDRINK--PSRPLPSGKIKLNEAKKFSAILLILGLVLSLFINIYALIIAVINALFLYLYAKKYKYKPIGNFIIGYLTGSVFLFGGVAGK---NVMPVVILFLCSLLSIWGREIVKDFEDMEGDKKEGVISLPIKYGKKSLYFATFLVVLAVILSPLPYILKIFGIWYLILIAICDILFIYAMALLLKPNKETASKVSKFLKIIMNIVLLAFIVGAIKL----------------- |
10 | 4tq3A | 0.18 | 0.13 | 4.22 | 1.00 | DEthreader | | ---------------------------------------------------------------S--------KYLRLLRP--V-AWLCFLLPYAVGFGFGI--TPNASLQHAVLGLLSFAFWMAFSFTINALYDRDVDRLHDGLSMQPLVTGEISVREAWLYCIAFLALSLATAAAINEKFFLAMLGANIIGYVYSRFKAWPVMDVICNALAAVLAFYAGLSIGG--AE-VP-IAIYPAAFFLAATFYIPTAVSDYEFDKKAGLKNTPVFFGERALKSLYPLSAITVILWAYVFLMAERIKVISPLIIAYTLIYTFIINSRWGEKLNVSPNLILTPFGIISALFI--YG--V------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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