Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400
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| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSSSSCCHHHHHCCCHHHHHHHHHHHHHHCCCCSSSCCCCCCCCSSSSSSCCCSCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSCCCCCCCCCCCCSSCCCCCCCCCCCCCCCCCCSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCCCSCCCSCCCCCSCCCCCCCSSCCCCCCHHHCCCSCCCCCSCCCCCCCSSCCCCCHHHHCCCSCCCCCSCCCCCCCSSCCCCCCCCSSCCSCCCCCSCCCCCCCSCCCCCCHHHSSCCSCCCCCCCCCCCCCSSCCCCCCCCSCCCCCCCCCSCCCCCCCSSCCCCCHHHHSCCCCCCCCCCCCCCCCCCSCCCCCCCCCSCCSCCCCCCCCCCCCCC MAPPLAPLPPRDPNGAGPEWREPGAVSFADVAVYFCREEWGCLRPAQRALYRDVMRETYGHLSALGIGGNKPALISWVEEEAELWGPAAQDPEVAKCQTQTDPADSRNKKKERQREGTGALEKPDPVAAGSPGLKSPQAPSAGPPYGWEQLSKAPHRGRPSLCAHPPVPRADQRHGCYVCGKSFAWRSTLVEHVYSHTGEKPFHCTDCGKGFGHASSLSKHRAIHRGERPHRCLECGRAFTQRSALTSHLRVHTGEKPYGCADCGRRFSQSSALYQHRRVHSGETPFPCPDCGRAFAYPSDLRRHVRTHTGEKPYPCPDCGRCFRQSSEMAAHRRTHSGEKPYPCPQCGRRFGQKSAVAKHQWVHRPGAGGHRGRVAGRLSVTLTPGHGDLDPPVGFQLYPEIFQECG |
1 | 5v3jE | 0.32 | 0.22 | 6.50 | 0.97 | CEthreader | | --------------------------------------------------------------------------------------------------------------------PHKCKECGKAFHTPSQLSHHQKLHVGEKPYKCQECGKAFPS-NAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIHT-------------- |
2 | 4uvkA | 0.07 | 0.05 | 2.05 | 0.67 | DEthreader | | PTEL--------------QD-DRFLQEFINLLLCCFLLISKDKPYANFVEFMFRLMDALLTGPLIIDLLTWLSPLSVTLICFFIESMVHALQVLKNLEVRLGKNSRYLAAKHILFQALVTTH-I-PIES-S-VLASILGVFNLFAFEDWDIKILEKIIKA----SQVRKLGF-NE--------LDE-LWL-NH-------------------SQ-LKIHLGKFLEEKLH-NDE---NMNTLYGVFLNKLAL-ETIQE----------LKLLALLTTWQLQ--WVDILPV--------FSLRTVS--S-----------------VKSFKVIFDALSSDTNDNDGTL---DFLLKWSVKVFLYLESLFANSELDGCEKELLLFTILKSIALNKEKLGP----------- |
3 | 5v3jE | 0.36 | 0.20 | 5.83 | 0.98 | EigenThreader | | -------------------------------------------------------------------------------------------------------------------------------------------------PHKCKECGKAFHTPSQLSHHQKLHVGEKPYKCQECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYEKECGKTFGRGSELSRHQKIHT------------------------------------------- |
4 | 1vt4I3 | 0.09 | 0.09 | 3.36 | 1.68 | MapAlign | | ----RSIVDHYNIPKTFDSDDLIPPYLDQYFYSHI-GHHLKNIEHPERMTLFDFRFLEQKIRWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAIFEEAHKQVQRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
5 | 5v3jE | 0.32 | 0.22 | 6.63 | 2.50 | FFAS-3D | | --------------------------------------------------------------------------------------------------------------------PHKCKECGKAFHTPSQLSHHQKLHVGEKPYKCQECGKAFPS-NAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSH-SGEKPYECKECGKTFGRGSELSRHQKIHT------------- |
6 | 5v3jE | 0.33 | 0.23 | 6.76 | 1.42 | MapAlign | | --------------------------------PHKCKECGKAFTPSQLSHHQKLHVGEKPYKCQECGKA-FPSNAQLSL-------HHRVHTDEKCFECKECGKAFMRPSHLLR--------------------------------------------------HQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIH------------------------------------------- |
7 | 5v3jE | 0.34 | 0.23 | 6.74 | 6.55 | SPARKS-K | | ---------------------------------------------------------------------------------------------------------------------------PHKCKECGKAFHTPKLHVGEKPYKCQECGKAFP-SNAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECGKTFGRGSELSRHQKIHT----------------- |
8 | 3tspA | 0.08 | 0.08 | 3.16 | 1.24 | MapAlign | | ----TCPACLAEMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPV--ACPECGPYLEWVSHGEHAEQEAALQAAIAQLKMGNIVAIKGIGGFHLACDARNSNAVATLRARKHRPAKPLAVMLPVADGLPDAARQLLTTPAAPIVLVGLNEVGVMLLQCPLVMTSGNLSGKPPAISNEQALEDLIVQRMDDSRSRGYVNTFCLVRQVVLSQHLEALRLMQNIYTPQYVVHDAHPGYSCLPT-QT-VLHHHAHAAVIALTWGGECLRVNYRECEHL--GGLPAVALPAAQPWRNAASSCGRLFDAVALGVTHPVTMPRLTFQWWFHDALAQGFAALMREQATMRGITTLVFSGGVIHPQSLPAGDGGLSLGQGVIAAAR |
9 | 5v3mC | 0.40 | 0.23 | 6.65 | 4.45 | CNFpred | | ------------------------------------------------------------------------------------------------------------------------------------------------PHKCKECGKAFHT-PSQLSHHQKLHVGEKPYKCQECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCK---------------------------------- |
10 | 5yysA | 0.06 | 0.06 | 2.54 | 1.18 | MapAlign | | -------------LHAGGQSRRLPGYAPSGKILTPVPVWERGQHLGQNLLSLQLPLYEGVFASDRKHLQKPSLAELESLSKTHLFLMDIGIWLLSDRAVEILMKRSHKESSEELKYYDLYSDFGLALGTHPRIEDEEVNTLSVAILPLPGGEFYHYGTSKEL-ISSTLSVQNKVYDQRRIMKPNPAMFVQ--NA-VVRIPLCAENADLWIIGPKW-KI-ASRHIINDWSLAVPCVDVVPMLDDVFKGDLDAAFVRLGDMLQMSRIHNRIEEQAAFDLLRDGCKDFHIVLRSIEIVSAGIEVTAAIPAGSGLGTSSASEICQRTETGG-GWQDQYGGVLQGVKLLFAQSPLVRWLFGRLVGKTWEQNKALDSGLIKDYTLGYKLPGAGGGGYLYMVAKDPQAAVRIRKI |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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