Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHCCCCCCCSCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCSCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCSCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCSCHHHHHHHHHHCCCCC MAAEHLLPGPPPSLADFRLEAGGKGTERGSGSSKPTGSSRGPRMAKFLSQDQINEYKECFSLYDKQQRGKIKATDLMVAMRCLGASPTPGEVQRHLQTHGIDGNGELDFSTFLTIMHMQIKQEDPKKEILLAMLMVDKEKKGYVMASDLRSKLTSLGEKLTHKEVDDLFREADIEPNGKVKYDEFIHKITLPGRDY |
1 | 5x9aA | 0.07 | 0.06 | 2.29 | 1.00 | DEthreader | | ----------------N--L--------------------KTSCQKHFTKTEVESLIICYKNLLEG--LKMDRNLFRDILHQKFNMTEDLLMDRVFRADKDSD-SYISLTEWVEGLSVFLRG-TLDEKMEYTFTVFDLNGDGYISREEMFQMLKTCLVDGIKDLVEIALKKMDHDHDSRLSKKDFKDAVLIEPL-- |
2 | 6u2mA2 | 0.41 | 0.36 | 10.52 | 1.63 | SPARKS-K | | ----------IPRLDTLILVKAMGHRKRFGNPFRPRDQ---------LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA----- |
3 | 2jnfA | 0.24 | 0.18 | 5.73 | 0.61 | MapAlign | | -----------------------------------------MGDVSKLSSNQVKLLETAFRDFETPGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDFDSFKIIGARFLNPEQMQQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFMGVMTGG---- |
4 | 2jnfA | 0.24 | 0.18 | 5.74 | 0.41 | CEthreader | | -----------------------------------------MGDVSKLSSNQVKLLETAFRDFETPGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDFDSFKIIGARFLNPEQMQQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFMGVMTGGDE-- |
5 | 4i2yA2 | 0.36 | 0.32 | 9.41 | 1.45 | MUSTER | | --SRRKWNKAGHAVRAIGRLSSPVVATRDQ-----------------LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTFDFPEFLTMMARKMNDTDSEEEIREAFRVFDKDGNGYIGAAELRHVMTDLGEKLTDEEVDEMIRVADIDGDGQVNYEEFVQMM------- |
6 | 3evuA | 0.36 | 0.34 | 10.18 | 1.00 | HHsearch | | TTGKL-----PVPWPTLVTTLVMPFKDDGFEGDTLVNRIELKGIDFTLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA----- |
7 | 1cfdA | 0.45 | 0.34 | 9.85 | 1.92 | FFAS-3D | | --------------------------------------------ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK---- |
8 | 1la0A | 0.28 | 0.22 | 6.86 | 0.92 | EigenThreader | | ------------------------------------MDDIYKAAVEQLTEEQKNEFKAAFDIFVLAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKGVE--- |
9 | 5ukgA | 0.40 | 0.31 | 9.18 | 1.23 | CNFpred | | -------------------------------------TLGWEASNGQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTFDFPEFLTMMARKMSYRVTEEEIREAFRVFDKDGNGYIGAAELRHVMTDLGEKLTDEEVDEMIRVADIDGDGQVNYEEFVQMMT------ |
10 | 1g8iB | 0.14 | 0.11 | 3.82 | 1.00 | DEthreader | | ------------------------KSN------------ELTRKT-YFTEKEVQQWYKGFIKDC--PSGQLDAAGFQKIYKQ-FFPDPTKFATFVFNVFDENKDGRIEFSEFIQALSVTSRG-TLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSKADPSVQ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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