Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260
| | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCSSSSCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCHHHHHHHHHSSCCCCCCHHHHHHHHHHHCCCSSSSSSCCCCCCCCCSSSCCCCCCCSSSSSSCCCCCCCCCC MAAEEPQQQKQEPLGSDSEGVNCLAYDEAIMAQQDRIQQEIAVQNPLVSERLELSVLYKEYAEDDNIYQQKIKDLHKKYSYIRKTRPDGNCFYRAFGFSHLEALLDDSKELQRFKAVSAKSKEDLVSQGFTEFTIEDFHNTFMDLIEQVEKQTSVADLLASFNDQSTSDYLVVYLRLLTSGYLQRESKFFEHFIEGGRTVKEFCQQEVEPMCKESDHIHIIALAQALSVSIQVEYMDRGEGGTTNPHIFPEGSEPKVYLLYRPGHYDILYK |
1 | 2zfyA | 1.00 | 0.83 | 23.35 | 1.33 | DEthreader | | --------------------------------------------NPLVSERLELSVLYKEYAEDDNIYQQKIKDLHKKYSYIRKTRPDGNCFYRAFGFSHLEALLDDSKELQRFKAVSAKSKEDLVSQGFTEFTIEDFHNTFMDLIEQVEKQTSVADLLASFNDQSTSDYLVVYLRLLTSGYLQRESKFFEHFIEGGRTVKEFCQQEVEPMCKESDHIHIIALAQALSVSIQVEYMD-GEGGTTNPHIFPEGSEPKVYLLYRPGHYDILYK |
2 | 2zfyA | 1.00 | 0.83 | 23.25 | 3.00 | SPARKS-K | | --------------------------------------------NPLVSERLELSVLYKEYAEDDNIYQQKIKDLHKKYSYIRKTRPDGNCFYRAFGFSHLEALLDDSKELQRFKAVSAKSKEDLVSQGFTEFTIEDFHNTFMDLIEQVEKQTSVADLLASFNDQSTSDYLVVYLRLLTSGYLQRESKFFEHFIEGGRTVKEFCQQEVEPMCKESDHIHIIALAQALSVSIQVEYM-DGEGGTTNPHIFPEGSEPKVYLLYRPGHYDILYK |
3 | 6k9nA | 0.46 | 0.39 | 11.30 | 1.87 | MapAlign | | --------------------------------------------LPYVGDKEPLSTLAAEFQSGSPILQEKIKLLGEQYDALRRTRGDGNCFYRSFMFSYLEHILQDKAEVERILKKIEQCKKTLADLGYIEFTFEDFFSIFIDQLESVLSSIGAEELLERTRDQMVSDYVVMFFRFVTSGEIQRRAEFFEPFISTNSTVVQFCKASVEPMGEESDHVHIIALSDALGVPIRVMYLDRSGNISVNHHDFSPEAKPYITLLYRPGHYDILYP |
4 | 6k9nA | 0.47 | 0.39 | 11.40 | 1.46 | CEthreader | | --------------------------------------------LPYVGDKEPLSTLAAEFQSGSPILQEKIKLLGEQYDALRRTRGDGNCFYRSFMFSYLEHILEDKAEVERILKKIEQCKKTLADLGYIEFTFEDFFSIFIDQLESVLQSIGAEELLERTRDQMVSDYVVMFFRFVTSGEIQRRAEFFEPFISGLSTVVQFCKASVEPMGEESDHVHIIALSDALGVPIRVMYLDRSSCISVNHHDFSPEEKPYITLLYRPGHYDILYP |
5 | 2zfyA | 1.00 | 0.83 | 23.25 | 2.24 | MUSTER | | --------------------------------------------NPLVSERLELSVLYKEYAEDDNIYQQKIKDLHKKYSYIRKTRPDGNCFYRAFGFSHLEALLDDSKELQRFKAVSAKSKEDLVSQGFTEFTIEDFHNTFMDLIEQVEKQTSVADLLASFNDQSTSDYLVVYLRLLTSGYLQRESKFFEHFIEGGRTVKEFCQQEVEPMCKESDHIHIIALAQALSVSIQVEYMDG-EGGTTNPHIFPEGSEPKVYLLYRPGHYDILYK |
6 | 2zfyA | 1.00 | 0.83 | 23.35 | 5.23 | HHsearch | | --------------------------------------------NPLVSERLELSVLYKEYAEDDNIYQQKIKDLHKKYSYIRKTRPDGNCFYRAFGFSHLEALLDDSKELQRFKAVSAKSKEDLVSQGFTEFTIEDFHNTFMDLIEQVEKQTSVADLLASFNDQSTSDYLVVYLRLLTSGYLQRESKFFEHFIEGGRTVKEFCQQEVEPMCKESDHIHIIALAQALSVSIQVEYMD-GEGGTTNPHIFPEGSEPKVYLLYRPGHYDILYK |
7 | 2zfyA | 0.99 | 0.83 | 23.15 | 2.96 | FFAS-3D | | --------------------------------------------NPLVSERLELSVLYKEYAEDDNIYQQKIKDLHKKYSYIRKTRPDGNCFYRAFGFSHLEALLDDSKELQRFKAVSAKSKEDLVSQGFTEFTIEDFHNTFMDLIEQVEKQTSVADLLASFNDQSTSDYLVVYLRLLTSGYLQRESKFFEHFIEGGRTVKEFCQQEVEPMCKESDHIHIIALAQALSVSIQVEYMDGE-GGTTNPHIFPEGSEPKVYLLYRPGHYDILYK |
8 | 2zfyA | 0.95 | 0.76 | 21.43 | 1.82 | EigenThreader | | --------------------------------------------NPLVSERLELSVLYKEYAEDDNIYQQKIKDLHKKYSYIRKTRPDGNCFYRAFGFSHLEALLDDSKELQRFKAVSAKSKEDLVSQGFTEFTIEDFHNTFMDLIEQVEKQTSVADLLASFNDQSTSDYLVVYLRLLTSGYLQRESKFFEHFIEGGRTVKEFCQQEVEPMCKESDHIHIIALAQALSVSIQVEYM---DGEGGTTEGSEP----KVYLLYRPGHYDILK- |
9 | 4ddgA | 0.98 | 0.91 | 25.43 | 2.17 | CNFpred | | ---------------------GAAAYDEAIMAQQDRIQQEIAVQNPLVSERLELSVLYKEYAEDDNIYQQKIKDLHKKYSYIRKTRPDGNSFYRAFGFSHLEALLDDSKELQRFKAVSAKSKEDLVSQGFTEFTIEDFHNTFMDLIEQVEKQTSVADLLASFNDQSTSDYLVVYLRLLTSGYLQRESKFFEHFIEGGRTVKEFCQQEVEPMCKESDHIHIIALAQALSVSIQVEYMDRGEGGTTNPHIFPEGSEPKVYLLYRPGHYDILYK |
10 | 6k9nA | 0.47 | 0.39 | 11.40 | 1.33 | DEthreader | | --------------------------------------------LPYVGDKEPLSTLAAEFQSGSPILQEKIKLLGEQYDALRRTRGDGNCFYRSFMFSYLEHILTDKAEVERILKKIEQCKKTLADLGYIEFTFEDFFSIFIDQLESVLQSIGAEELLERTRDQMVSDYVVMFFRFVTSGEIQRRAEFFEPFIGTNSTVVQFCKASVEPMGEESDHVHIIALSDALGVPIRVMYLDRSDAISVNHHDFSEAAKPYITLLYRPGHYDILYP |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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