Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140
| | | | | | | |
| SS Seq | CCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCSSSSSSCCCCCCCHHHHHHHHHHHHCCCCSSSSSSCCCCCCHHHHHHCCCCCCCSCCCCCCCCCSSSSSSSHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC YSFLDYILGGCQLMFTVFSPIVNHVARFAAQATQQRTATQYFILLIITDGVISDMEETRHAVVQASKLPMSIIIVGVGNADFAAMEFLDGDSRMLRSHTGEEAARDIVQFVPFREFRNAAKETLAKAVLAELPQQVVQYFKHKNLPPTNSEPA |
1 | 6kxkA | 0.45 | 0.41 | 11.85 | 1.17 | DEthreader | | FPAIMSYTAL-SLAGTLFGPVINAAAMIASASLAQGS-RKYYVLLIITDGVITDLQETKDALVSASDLPLSILIVGVGGADFKEMEILDADGERLESSSGRLASRDIVQFVALR-DVQYG--SVVQALLAELPSQFLTYM-RIRN-------- |
2 | 6kxkA | 0.44 | 0.41 | 12.05 | 1.76 | SPARKS-K | | TSYTSALFNVSLAGPTLFGPVINAAAMIASASLAQGS-RKYYVLLIITDGVITDLQETKDALVSASDLPLSILIVGVGGADFKEMEILDADKGRLESSSGRLASRDIVQFVALRDVQYGE-ISVVQALLAELPSQFLTYMRIRN--------- |
3 | 6kxkA | 0.42 | 0.39 | 11.33 | 0.92 | MapAlign | | TSYTSALFNVSLAGPTLFGPVINAAAMIASASLA-QGSRKYYVLLIITDGVITDLQETKDALVSASDLPLSILIVGVGGADFKEMEILDAKGERLESSSGRLASRDIVQFVAL--RDVQGEISVVQALLAELPSQFLTYMRIR---------- |
4 | 6kxkA2 | 0.44 | 0.41 | 11.87 | 1.02 | CEthreader | | TSYTSALFNVSLAGPTLFGPVINAAAMIASASLA-QGSRKYYVLLIITDGVITDLQETKDALVSASDLPLSILIVGVGGADFKEMEILDADKGRLESSSGRLASRDIVQFVALRDVQY-GEISVVQALLAELPSQFLTYMRIRN--------- |
5 | 4igiA | 0.16 | 0.14 | 4.56 | 0.66 | MUSTER | | QGVISAIRRLTLLGTPNTGAALEFVLRNISSTGSRIAEGVPQLLIVLTAEPSGD--DVRGPSVVLKQGGAVPIGIGIGNADISEMQTISFIPDFAVAIP------------TFRELGTI-QQVISERVIQLNREELSSL-------KPILTPS |
6 | 6kxkA | 0.43 | 0.40 | 11.69 | 3.94 | HHsearch | | FNYTSALFNVSLAGPTLFGPVINAAAMIASASL-AQGSRKYYVLLIITDGVITDLQETKDALVSASDLPLSILIVGVGGADFKEMEILDADKGRLESSSGRLASRDIVQFVALRDVQY-GEISVVQALLAELPSQFLTYMRIRN--------- |
7 | 6kxkA2 | 0.44 | 0.40 | 11.68 | 1.53 | FFAS-3D | | --YTSALFNVSLAGPTLFGPVINAAAMIASASLA-QGSRKYYVLLIITDGVITDLQETKDALVSASDLPLSILIVGVGGADFKEMEILDADKGRLESSSGRLASRDIVQFVALRDVQY-GEISVVQALLAELPSQFLTYMRIRN--------- |
8 | 6kxkA2 | 0.33 | 0.30 | 9.03 | 0.80 | EigenThreader | | SHCMTSYTSALFNVGPTLFGPVINAAAMIASASLAQGSRKYYVLLIITDGVITDLQETKDALVSASDLPLSILVGVGGADFKEMEILDADKGERLESSSGRLASRDIVQFVAV----QYGEISVVQALLAELPSQFLTYMRIRN--------- |
9 | 4f1jA | 0.14 | 0.11 | 3.81 | 0.83 | CNFpred | | EKALIIIKSLLPYGRTNLSDALLQVRKHLNDRINRE--NANQLVVILTDGIPDSIQDSLKESRKLNDRGVKIAVFGIGQINVAFNRFLVGCHPSDG-------KCNLYADSAWE-----NVKNVIGPFMKAVCVEVEK--------------- |
10 | 6kxkA2 | 0.45 | 0.41 | 11.85 | 1.17 | DEthreader | | FPAIMSYTAL-SLAGTLFGPVINAAAMIASASLAQGS-RKYYVLLIITDGVITDLQETKDALVSASDLPLSILIVGVGGADFKEMEILDADGERLESSSGRLASRDIVQFVALR-DVQYG--SVVQALLAELPSQFLTYM-RIRN-------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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