Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480
| | | | | | | | | | | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCCCSCCCCCCCCHHHHHHHHHHCCCCSSSSCCCCCCCCCCCCHHHHHHHHCCCSSSSSSCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCSSSSCCCCCCCCCSCCCCCCSSSSSSSSSSSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCSSSSSCCCSSSSSCCCCSSSSSSCCCCSSSSSSSSCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCC MAAGSEATTPVIVAAGAGGEEGEHVKPFKPEKAKEIIMSLQQPAIFCNMVFDWPARHWNAKYLSQVLHGKQIRFRMGMKSMSTVPQFETTCNYVEATLEEFLTWNCDQSSISGPFRDYDHSKFWAYADYKYFVSLFEDKTDLFQDVKWSDFGFPGRNGQESTLWIGSLGAHTPCHLDSYGCNLVFQVQGRKRWHLFPPEDTPFLYPTRIPYEESSVFSKINVVNPDLKRFPQFRKAQRHAVTLSPGQVLFVPRHWWHYVESIDPVTVSINSWIELEEDHLARVEEAITRMLVCALKTAENPQNTRAWLNPTEVEETSHAVNCCYLNAAVSAFFDRCRTSEVVEIQALRTDGEHMKKEELNVCNHMEVGQTGSQNLTTGTDKPEAASPFGPDLVPVAQRSEEPPSERGGIFGSDGKDFVDKDGEHFGKLHCAKRQQIMSNSENAIEEQIASNTTTTPQTFISTDDLLDCLVNPQVTRIVAQLLIQGRSL |
1 | 2w0xA | 0.20 | 0.12 | 3.86 | 0.83 | DEthreader | | GEPREPWDESQLRSYFPT-RPIPRLSQSD-PRAEELIEN-EEPVVLTDTNLVYPALKWDLEYLQENIG-NGDFSVYSASTHKFLYYDEPRSNREEMKFHEFVEKLQDIQQR--------GGEE----RLYLQQT-LNDVIVDFLGFNWNWIQQGWGQLTSNLLLIGMEGNVTPAHYDEQ-QNFFAQIKGYKRCILFPPDQFECLYPYPVHHP-CDRQSQVDFDNPDYERFPNFQNVVGYETVVGPGDVLYIPMYWWHHIESLGGITITVNFWYKGAPTPIQVAIMRNIEKMLGEALG---N--PQEVG--------------------------------------------------------------------------------------------------------------------------------------------------------PLLNTMIK--Y----------------- |
2 | 5yknA | 0.11 | 0.09 | 3.18 | 1.05 | MapAlign | | ---------NPSEACRPLVDDAPIFYPFPLGYIEKLRSKAEGICRIVPPVAWRPPCPLKEKKIW---ENSKFPTRIQFID---LLQNRFGFQTGDFTLAAFQKYDEYFKECYFQPYWRIVEQATDEVEVYYGADLETKKFGSGFPLNSRLPGSVLAGVIVPWLYVGMCFSTFCWHVEHHLYSMNYLHTGPKVWYGIPGNHAESFVMLLFEEQPDLLTQL-SPR-----ILKEE-GVPVYRAVQRSGEFILTFPKAYHSGFNCG-FNCAEAVNVAWLHGQDKLLLGAAMEATYCLWEL-------SLSKKKTPVIARWKRVCSGLLTKAVKKRVQM-----EEERLNHLQDGFSL--------------------------------------------RKMRECFLCFYDLHMSASSCKCSPNRFACLIHAKDLCSCESKDRYILIRHTLDEL---------WALVRALGDLDAIDLWA--------- |
3 | 2w0xA | 0.22 | 0.14 | 4.28 | 2.08 | SPARKS-K | | VASGSGEPREELRSYSFPTRPIPRLSQSD-PRAEELIEN-EEPVVLTDTNLVYPALKWDLEYLQENIGNGDFSVYSASTHKFLYYDFKPRSNREEMKFHEFVEKLQDIQGGEERLYLQQTLNDTVGRKIVMDFLGFNWINKQQGKRGW-------GQLTSNLLLIGMEGNVTPAHYDEQQ-NFFAQIKGYKRCILFPPDQFECLYPYPVHH-PCDRQSQVDFDNPDYERFPNFQNVVGYETVVGPGDVLYIPMYWWHHIESLLGITITVNFWYKGAPLKAHQKVAIMRNIEKMLGEALGNPQEVGPLLNTMIKGRYN--------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
4 | 3avrA | 0.09 | 0.07 | 2.67 | 1.05 | MapAlign | | -----------PLPKDKLNPPTPSIYLAFFPPLHQFCTNPNPVTVIRGLAGKLDLGLFSTKTLVEANNEHMVEVRTQLLPTGTKKIWHCESNRSHTTIAKYAQYQASSF-----------QESLPFKTIKFGTNILSKWKLQLHELKAFVRVVSAGNMNTVQLYMKVPGSRTPGHQENNFCSVNINIGGDCEWFVVPEGYWGVLFCEKNNLNFLMGSW--WPN---LEDLYEA-NVPVYRFIQRPGDLVWINAGTVHWVQAIG-WCNNIAWNVGP--LTACQYKLAVERYEWNKLQSVKSIVMVHLSWNMARNIKVSDPKLFEMIKYCLLRTLKQ-----CQTLREALIAAGKEIIWHGRTKEEPAHYCSICEV---------------------------------EVFDLLFVTNESNSRKTYIV--------------------------------HCQDCARKTSGNLENFMEDLMQVYD---- |
5 | 4qszA2 | 0.19 | 0.11 | 3.50 | 0.66 | CEthreader | | ------EFPAAARDLNVPRVVPYLDEPPSPLCFYRDWVCPNRPCIIRNALQHWPALQWSLSYLRATVGSTEVSVAVTPYADAVRGDRFVMPAERRLPISHVLDVLEGRAQHPGVLY------------VQKCSNLPTELPQLLSDIESHVPWASGKMPDAVNFWLGDASAVTSLHKDHYE-NLYCVVSGEKHFLLHPPSDRPFIPYNLYTPAEKVPWIPLDPLAPDLTQYPSYSQAQALHCTVRAGEMLYLPALWFHHVQQSH-GCIAVNFWYDMEYDLKYSYFQLMDTLTRATGLD----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
6 | 5yknA | 0.08 | 0.07 | 2.59 | 1.05 | EigenThreader | | RWNPSEACRPLVDDAP-------IFYPTNEDFDKLRSKAESYGICRIVPPWRPPCPLKEKKIWE--NSKFPTRIQFIDL-----LQNRFGFQTGDFTLAAFQKYDEYFKECYFQP-KVKDLEGEYWRIVEQKKFGSGFPADQYSQCNLNNLSRLISGVIVPWLYVGMCFSTFCWHVEDHHLYSMNYLHTGDVWYGIPGNHAESFENVPDLFEEQPDLLHQLVTQLSPRILKEE-GVPVYRAVQRSGEFILTFPKAYHSGFNC-GFNCAEAVNVALSHDKLLLGAAMEATYCLWELSLSKKKTPVIARWKRVCSEDGLLTKAVKKRVQMEEERLNHLQ----------------------DGFSLRKMRECFLCFYDLHM-----------SASSCKCSPNRFACLIHAKDLCSCESKD-------RYILIR------------------------HTLDELWALVRALEGDLDAIDLWASK------- |
7 | 2w0xA | 0.23 | 0.14 | 4.31 | 3.32 | HHsearch | | -AVA-SGSGEPRESYSFPTRPIPRLSQSDPR-A-EELIENEEPVVLTDTNLVYPALKWDLEYLQENIGNGDFSVYSASTHKFNFQNFKPRSNREEMKFHEFVEKLQDIQQGEERLYLQQTLN-------------DTVGRKIVMDFLGFNWNWIGGQLTSNLLLIGMEGNVTPAHYDEQQ-NFFAQIKGYKRCILFPPDQFECLYPYPVH-HPCDRQSQVDFDNPDYERFPNFQNVVGYETVVGPGDVLYIPMYWWHHIESLLNITITVNFWYKGAPTAHQAIMRNIEKMLGEALGN---PQEVGPLL---------------------NTMIKGRYN------------------------------------------------------------------------------------------------------------------------------------------------------ |
8 | 4diqA | 0.10 | 0.08 | 2.98 | 1.05 | EigenThreader | | -----WDSPSSRRRAARLFEWLIA--PMPPDHFYRRL--WEREAVLVRRYQGLFSTADLDSMLRNEFGQHLDAARYIG-------------RRETL--------------NPPGRALPAAAWSLYQAGCSLRLLCPQAFSTTVWQFLAVLQEQFGSMA-GSNVYLTPPNSQGFAPHYDDIEAFVLQLEGRKLWRVYRPRAPT----EELALTSSPNFSQDDLGEP------------VLQTVLEPGDLLYFPRGF-IHQAECQVHSLHLTLSTYQRNTLPLAVQAAMEENVEFRRGLPRDFMDY---MGAQHSDSKDPRRTAFMEKVRVLVARLGHFAPVDAVADQRAKDFIHDSLPPVLTDRERALSVYGLPIRGAQLTTEHMLQDGIGHLFLVENSRVYHLEEPKCLEIYPQQADAMELLLGSYP----------EFVRV---------GDLPCD-------------SVEDQLSLATTLYDKGLL |
9 | 2w0xA | 0.24 | 0.15 | 4.65 | 1.98 | FFAS-3D | | VASGSGEPREEAGALSFPTRPIPRLSQSD--PRAEELIENEEPVVLTDTNLVYPALKWDLEYLQENIGNGDFSVYSASTHKFLYYDFKPRSNREEMKFHEFVEKLQDIQQRGGEERLYLQQTLNDTVGRKIVMDFLGFNWNWINKQQGK---RGWGQLTSNLLLIGMEGNVTPAHYDEQQ-NFFAQIKGYKRCILFPPDQFECLYPYPV-HHPCDRQSQVDFDNPDYERFPNFQNVVGYETVVGPGDVLYIPMYWWHHIESLLNITITVNFWYKLKAHQKVAIMRNIEKMLGEAL---GNPQEVGPLLN----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
10 | 3al5A | 0.22 | 0.13 | 4.21 | 1.31 | MUSTER | | -----------------QHLPVPRLEGVSREQFMQHLYPQRKPLVLEGI-DLGPCTKWTVDYLSQVGGKKEVKIHVQM-------DFSKNFVYRTLPFDQLVQRAAEKHKEFFVSEDEKY-RSLGEDPRKDVADIRKQFPLLKGDIKFPEF-FKEEQFFSSVFRISSPGLQLWTHYDVM-DNLLIQVTGKKRVVLFSPRDAQYLYLKG------TKSEVLNIDNPDLAKYPLFSKARRYECSLEAGDVLFIPALWFHNVISEEF-GVGVNIFWKHLPSECY---------------DKTDT-----YGNK---DPTAASRAAQILDRALKTLAELPEEYRDFYARRMVLHIQDKAYS----------------------------------------------------------------------------------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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