Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420
| | | | | | | | | | | | | | | | | | | | | |
| SS Seq | CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCSSSSSSSCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCSSSSCCCCCCCCCCCCCCCCCCCSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCSSSSCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCSSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSSSCCCCCCCCCSSCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHCHHHHHCCCCCCCCCCCCSSSSSCCCCSSSSSCCCC MGWLFLKVLLAGVSFSGFLYPLVDFCISGKTRGQKPNFVIILADDMGWGDLGANWAETKDTANLDKMASEGMRFVDFHAAASTCSPSRASLLTGRLGLRNGVTRNFAVTSVGGLPLNETTLAEVLQQAGYVTGIIGKWHLGHHGSYHPNFRGFDYYFGIPYSHDMGCTDTPGYNHPPCPACPQGDGPSRNLQRDCYTDVALPLYENLNIVEQPVNLSSLAQKYAEKATQFIQRASTSGRPFLLYVALAHMHVPLPVTQLPAAPRGRSLYGAGLWEMDSLVGQIKDKVDHTVKENTFLWFTGDNGPWAQKCELAGSVGPFTGFWQTRQGGSPAKQTTWEGGHRVPALAYWPGRVPVNVTSTALLSVLDIFPTVVALAQASLPQGRRFDGVDVSEVLFGRSSADYTQDPSVTPCCNPYQIACRCQAA |
1 | 3ed4B | 0.29 | 0.24 | 7.37 | 1.33 | DEthreader | | ---------------------------------KQPNLVIIMADDLGYGDLATYGHQIVKTPNIDRLAQEGVKFTDYYAPAPLSSPSRAGLLTGRMPFRTGIRSWIPSGKDVALGRNELTIANLLKAQGYDTAMMGKLHLNGGRQPQAQDMGFDYSLANTAGFVTDA--------TLDNAK-E---RP-RY--G-MV-YPTGWLRNGQPTPRADK--MSGEYVSSEVVNWLDNK-KDSKPFFLYVAFTEVHSPLASPKLDSMSRGVGEYYANISYLDAQVGKVLDKIKAGEEDNTIVIFTSDNGPVT--R---EA-----RKVYEL----GRKDNLWEGGIRVPAIIKYGKHLPQGMVSDTPVYGLDWMPTLAKMMNFKLPTDRTFDGESLVPVLEQKALKREPDGDWKMIEKMYGKFK------ |
2 | 6s20C1 | 0.28 | 0.24 | 7.47 | 2.35 | SPARKS-K | | --------------------------------SQKPNIIYIFADDLGIGDLSCYGATKVSTPHIDRLAGQGVQFTNAYATSATSTPSRFGLLTGMYPWRQENTGIAPGNSELIIDTACVTMADMLKEAGYATGVVGKWHLGGHITPNAQSIGFDYEFVIPNGHVVGLDPNDPITVNYEHKVGDWKLKPSQGHNNTIINGIPRIGWMTGGKSALWKDEDIADIITNKAKSFIVSHK--EEPFFLYMGTQDVHVPRVPHPRFAGKSGLGTRGDVILQLDWTIGEIMNTLDSQLTDNTILIFTSDNGPVIDQDQAFERLNGHTPM----GIYRGGKYSAYEAGTRIPFIVRWPAKVKP-NKQQALFSQIDIFASLAALLKQPLPEDAAPDSQEHLNTLLGKDYTSRE--------------------- |
3 | 1n2lA | 0.40 | 0.34 | 9.92 | 1.00 | MapAlign | | ---------------------------------RPPNIVLIFADDLGYGDLGCYGHPSSTTPNLDQLAAGGLRFTDFYVPVSL-TPSRAALLTGRLPVRMGMYGVLVPSSRGGLPLEEVTVAEVLAARGYLTGMAGKWHLGVGGAFLPPHQGFHRFLGIPYSHDQNLTCFPPATPC----------------DGGCDQVPIPLLANLSVEAQPPWLPGLEARYMAFAHDLMADAQRQDRPFFLYYASHHTHYPQFSGQSFAERSGRGPFGDSLMELDAAVGTLMTAIGDLLLEETLVIFTADNGPETMRMSRGGCSGLL----------RCGKGTTYEGGVREPALAFWPGHIAP-GVTHELASSLDLLPTLAALAGAPLP-NVTLDGFDLSPLLLGTGKSPRQSLFFYPSYPDEVRG------- |
4 | 1n2lA1 | 0.39 | 0.34 | 10.08 | 0.59 | CEthreader | | ---------------------------------RPPNIVLIFADDLGYGDLGCYGHPSSTTPNLDQLAAGGLRFTDFYVPVS-LTPSRAALLTGRLPVRMGMYGVLVPSSRGGLPLEEVTVAEVLAARGYLTGMAGKWHLGVGPAFLPPHQGFHRFLGIPYSHDQGPCQN----------LTCFPPATPCDGGCDQGLVPIPLLANLSVEAQPPWLPGLEARYMAFAHDLMADAQRQDRPFFLYYASHHTHYPQFSGQSFAERSGRGPFGDSLMELDAAVGTLMTAIGDLLLEETLVIFTADNGPETMRMSRGGCSGLLR----------CGKGTTYEGGVREPALAFWPGHIAPG-VTHELASSLDLLPTLAALAGAPLPN-VTLDGFDLSPLLLGTGKSPRTFGPSQVARGEDPALQICCHPG |
5 | 1n2lA1 | 0.40 | 0.35 | 10.27 | 1.86 | MUSTER | | ---------------------------------RPPNIVLIFADDLGYGDLGCYGHPSSTTPNLDQLAAGGLRFTDFYVPVS-LTPSRAALLTGRLPVRMGMYPVLVPSSRGGLPLEEVTVAEVLAARGYLTGMAGKWHLGVGPAFLPPHQGFHRFLGIPYSHDQGPCQNLTCFPPATPCDGGCDQ----------GLVPIPLLANLSVEAQPPWLPGLEARYMAFAHDLMADAQRQDRPFFLYYASHHTHYPQFSGQSFAERSGRGPFGDSLMELDAAVGTLMTAIGDLLLEETLVIFTADNGPETMRMSRGGCSGLL----------RCGKGTTYEGGVREPALAFWPGHIAPG-VTHELASSLDLLPTLAALAGAPLPN-VTLDGFDLSPLLLGTGKSPRTFGPSQVARGEDPALQICCHPG |
6 | 1p49A | 0.32 | 0.29 | 8.66 | 1.73 | HHsearch | | -------------------------------AASRPNIILVMADDLGIGDPGCYGNKTIRTPNIDRLASGGVKLTQHLAASPL-TPSRAAFMTGRYPVRSGMASWSRTGSSGGLPTDEITFAKLLKDQGYSTALIGKWHLGMSCHHHPLHHGFNYFYGISLTNLRDCKPGEGSVFTTGFLVFLPLQLGLHVPLGFLGFLYFFMMRNYEIIQQPMSYDNLTQRLTVEAAQFIQRN--TETPFLLVLSYLHVHTALFSSKDFAGKSQHGVYGDAVEEMDWSVGQILNLLDERLANDTLIYFTSDQGAHVEEVSSKGEI---HGGSN--GIYKGGKANNWEGGIRVPGILRWPRVIQAGQKIDEPTSNMDIFPTVAKLAGAPLPEDRIIDGRDLMPLLEGKSQSDHEFLFHYCNSTSIWKAFFDISKD |
7 | 3ed4B | 0.28 | 0.25 | 7.62 | 3.07 | FFAS-3D | | ----------------------------NAFSPKQPNLVIIMADDLGYGDLATYGHQIVKTPNIDRLAQEGVKFTDYYAPAPLSSPSRAGLLTGRMPFRTGIRSWIPSGKDVALGRNELTIANLLKAQGYDTAMMGKLHLNAGGDRTDQPQAQDMGFDYSLANTAGFVTDATLDNAKERPRYGMVYPTGWLRNG----------------QPTPRADKMSGEYVSSEVVNWLDNKKDSKPFFLYVAFTEVHSPLASPKADKPWRGVGEYYANISYLDAQVGKVLDKIKMGEEDNTIVIFTSDNGPVTREARK----VYELNLAGETDGLRGRKDNLWEGGIRVPAIIKYGKHLPQGMVSDTPVYGLDWMPTLAKMMNFKLPTDRTFDGESLVPVLEQKALKNLKSDRYTLNLIGKKDIEKQMYG- |
8 | 1p49A | 0.29 | 0.26 | 8.02 | 1.27 | EigenThreader | | -------------------------------AASRPNIILVMADDLGIGDPGCYGNKTIRTPNIDRLASGGVKLTQHLAASPLTP-SRAAFMTGRYPVRSGMASWSRTGVSGGLPTDEITFAKLLKDQGYSTALIGKWHLGTDFCHHPLHHGFNYFYGLTNLRDCKPGEGSVFTTGFKRLVAALILTLFLGFLHYFRPLNCFMMRNYIQQPMSYDN--LTQRLTVEAAQFIQR--NTETPFLLVLSYLHVHTALFSSKDFAGKSQHGVYGDAVEEMDWSVGQILNLLDELRLNDTLIYFTSDQGAH-----VEEVSSKGEIHGGSNGIYKGGKANNWEGGIRVPGILRWPRVIQAGQKIDEPTSNMDIFPTVAKLAGAPLPEDRIIDGRDLMPLLEGKSQRSDHCFCFGSYVTHHDPPLLFDISK |
9 | 1e1zP | 0.40 | 0.34 | 10.14 | 3.41 | CNFpred | | ---------------------------------RPPNIVLIFADDLGYGDLGCYGHPSSTTPNLDQLAAGGLRFTDFYVPVSLSTPSRAALLTGRLPVRMGMYPGVLVPSRGGLPLEEVTVAEVLAARGYLTGMAGKWHLGVGPAFLPPHQGFHRFLGIPYSHDQGPC---NLTCFPATPCDGGCDQG---------LVPIPLLANLSVEAQPPWLPGLEARYMAFAHDLMADAQRQDRPFFLYYASHHTHYPQFSGQSFAERSGRGPFGDSLMELDAAVGTLMTAIGDGLLEETLVIFTADNGPETMRMSRGGCSGLLRCGK----------GTTYEGGVREPALAFWPGHIA-PGVTHELASSLDLLPTLAALAGAPLPN-VTLDGFDLSPLLLGTGKSPRQSLFFYPSYPDRGVFAVRTGKY |
10 | 1n2lA | 0.40 | 0.33 | 9.79 | 1.17 | DEthreader | | ---------------------------------RPPNIVLIFADDLGYGDLGCYGHPSSTTPNLDQLAAGGLRFTDFYVPVSL-TPSRAALLTGRLPVRMGMYPGVLVSSRGGLPLEEVTVAEVLAARGYLTGMAGKWHLGVGPAFLPPHQGFHRFLGIPYSHDQGPC---------QNLT----A--TPCDGGCD-LVPIPLLANLSVEAQPPWLPGLEARYMAFAHDLMADAQRQDRPFFLYYASHHTHYPQFSGQFAERSG-RGPFGDSLMELDAAVGTLMTAIGDGLLEETLVIFTADNGPETMRMSRGGCSGL-R----------CGKGTTYEGGVREPALAFWPGHIA-PGVTHELASSLDLLPTLAALAGAPLP-NVTLDGFDLSPLLLGTGKSPRQSGKYKALLQLLKAQL------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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