>Q96E39 (390 residues) MVEADRPGKLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPA DAKDAARDMNGKSLDGKAIKVEQATKPSFERGRHGPPPPPRSRGPPRGFGAGRGGSGGTR GPPSRGGHMDDGGYSMNFNMSSSRGPLPVKRGPPPRSGGPSPKRSAPSGLVRSSSGMGGR APLSRGRDSYGGPPRREPLPSRRDVYLSPRDDGYSTKDSYSSRDYPSSRDTRDYAPPPRD YTYRDYGHSSSRDDYPSRGYGDRDGYGRDRDYSDHPSGGSYRDSYESYGNSRSAPLTRGP PPSYGGSSRYDDYSSSRDGYGGSRDSYSSSRSDLYSSCDRVGRQERGLPPSVERGYPSSR DSYSSSSRGAPRGAGPGGSRSDRGGGRSRY |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 | | | | | | | | | | | | | | | | | | | MVEADRPGKLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPSFERGRHGPPPPPRSRGPPRGFGAGRGGSGGTRGPPSRGGHMDDGGYSMNFNMSSSRGPLPVKRGPPPRSGGPSPKRSAPSGLVRSSSGMGGRAPLSRGRDSYGGPPRREPLPSRRDVYLSPRDDGYSTKDSYSSRDYPSSRDTRDYAPPPRDYTYRDYGHSSSRDDYPSRGYGDRDGYGRDRDYSDHPSGGSYRDSYESYGNSRSAPLTRGPPPSYGGSSRYDDYSSSRDGYGGSRDSYSSSRSDLYSSCDRVGRQERGLPPSVERGYPSSRDSYSSSSRGAPRGAGPGGSRSDRGGGRSRY |
Prediction | CCCCCCCCSSSSCCCCCCCCHHHHHHHHHHCCCSSSSSSSSCCCCCCCCCSSSSSSCCHHHHHHHHHHCCCCSSCCSSSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC |
Confidence | 988899975998099988899999999985285689998745899986754899969999999999973993768918799863476434667889999877898888898999988888887677888888888888887778888888888876678888777777776677777778887777777889988889887777788887777788777787888888888888888777787777878888888888888988888887777788888888777788888788877899887888887666788878788888877788788877677777777888976667888875555677888888898888776677888889 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 | | | | | | | | | | | | | | | | | | | MVEADRPGKLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPSFERGRHGPPPPPRSRGPPRGFGAGRGGSGGTRGPPSRGGHMDDGGYSMNFNMSSSRGPLPVKRGPPPRSGGPSPKRSAPSGLVRSSSGMGGRAPLSRGRDSYGGPPRREPLPSRRDVYLSPRDDGYSTKDSYSSRDYPSSRDTRDYAPPPRDYTYRDYGHSSSRDDYPSRGYGDRDGYGRDRDYSDHPSGGSYRDSYESYGNSRSAPLTRGPPPSYGGSSRYDDYSSSRDGYGGSRDSYSSSRSDLYSSCDRVGRQERGLPPSVERGYPSSRDSYSSSSRGAPRGAGPGGSRSDRGGGRSRY |
Prediction | 735446621000020336033720352056215034030031462553400000104337104400650463405425030530454655464545444444433443233223232322223322221322223232322323242444322233433432444444343434443444434443454444244444444444434434444344443444453444444443323445244344243234444444444444323444544544444434434433444444444444444443544435444445434344442444443434444344354432345364434444533464544434441645442665464337 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 | | | | | | | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SS Seq | CCCCCCCCSSSSCCCCCCCCHHHHHHHHHHCCCSSSSSSSSCCCCCCCCCSSSSSSCCHHHHHHHHHHCCCCSSCCSSSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MVEADRPGKLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPSFERGRHGPPPPPRSRGPPRGFGAGRGGSGGTRGPPSRGGHMDDGGYSMNFNMSSSRGPLPVKRGPPPRSGGPSPKRSAPSGLVRSSSGMGGRAPLSRGRDSYGGPPRREPLPSRRDVYLSPRDDGYSTKDSYSSRDYPSSRDTRDYAPPPRDYTYRDYGHSSSRDDYPSRGYGDRDGYGRDRDYSDHPSGGSYRDSYESYGNSRSAPLTRGPPPSYGGSSRYDDYSSSRDGYGGSRDSYSSSRSDLYSSCDRVGRQERGLPPSVERGYPSSRDSYSSSSRGAPRGAGPGGSRSDRGGGRSRY | |||||||||||||||||||
1 | 6r5kD | 0.10 | 0.09 | 3.42 | 1.32 | SPARKS-K | -------ASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAIEQLNYTPIKGRLCRIMWSQRPSLRKKGSKNLHPDIDNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPHL--SRKERDSQLEETKAHYTNLYVKNINFAKFGPIVSASLEKDADGKLEKHEDAVALNDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKLEEEFAPYGTITSAKVMRTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKDVRRSQLAQQIQARNQMRYQQATAAAA-------------------- | |||||||||||||
2 | 2mb0B | 0.96 | 0.23 | 6.54 | 1.69 | CNFpred | MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPSFESGRRG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
3 | 6zu9p | 0.10 | 0.09 | 3.54 | 1.45 | MapAlign | ------DQYIVVNGAPVIKVPVLKKALTSLFGKVVNMEFPIDEATGKTKGFLFVECGSMNDAKKIIKSFHGKRLLKHRLFLYTSRENWSTNYVRFSPKGTYLFSYHQQGVTAWGGPNFDRLRRFYHPDVRNSSVSPNEKYLVTFSTEPIIVEEDNEFSPFTKKNEGHQLCIWDIASGLLMATFPV--IKSPYLKWPLVRWSYNDKYCARMVGDSLIVHDATKNFMPLEAKALKPSGIRDFSFASVLLAYWTPETNNSACTATIAEVPRGRVLKTVNLVQVSNVTLHWQNQAEFLCFNVERHTKSGKTQFSNLQICRLTERDIPVEKVNDVSASLKDVAHPTYSAATNITWDPSGRYVTAWSSSLKHKVEHGYKIFNIAGNLVKEDIIAGF | |||||||||||||
4 | 6zu9p | 0.11 | 0.11 | 3.97 | 0.61 | CEthreader | --EFNFDQYIVVNGAKVPVLKKALTSLFSKAGKVVNMEFPIDEATGKTKGFLFVECGSMNDAKKIIKSFHGKRLDLKHRLFLYTMKDVERYNSPSSSLKSWLMDDKVRDQFVLQDDVKTEEDSLVESRENWSTNYVRFSPKGTYYHQQGVTAWGGPNFDRLRRFYHPDVRNSSVSPNEKYSTEPIIVEEDNEFSPFTKKNEGHQLCIWDIASGLLMATFPVIKSPYLKWPLVRWSYNDKYCARMVGDSLIVHDATKNFMPLEAKALKPSGIRDFSFAPEGVKLQPFRNGDEPSVLLAYWTPETNNSACTATIAEVPRGRVLKTVNLVQVSNVTLHWQNQAEFLCFNVERHTKSGKTQFSNLQICRLTERDIPVEKVELKDSVFEFGWEPH | |||||||||||||
5 | 3e0dA | 0.06 | 0.06 | 2.72 | 0.80 | EigenThreader | LKFAHLHQHTDHGNLF---GAVEFYKKATAKPIIGYEAYVAAESRFDRKRGLTLLAKDYQNLVRLASRAYLEGFYEKPRIDDVDLPIGDKMVYRIPRFPLGRTEAQYLRELTFLGLLRRYPDRITINWARGHGVSVGPGRGSAAGSLVAYAVGITNIDPLRFGLLFERFLNPERVSMPDILIPVQFGKPKPLQEAFEAEPELRAEMEKDERIRQVIEVAMRLEGLNRHKGVELDYDRLPLDDPKTFELLSRGETKGVFQLESGGMTATVRGLKPRRLEDIIALVSLYRPGPMEHIPTYIRRHHGQEPVSYAEFPHAEKYLRPILDETYGIPVYQEQIMQIASQVAGYSLGEADLLRRAMGKKRVEEMQKHRERFVRGAKERGVPEEEANR | |||||||||||||
6 | 2fy1A | 0.73 | 0.20 | 5.67 | 0.79 | FFAS-3D | MVEADHPGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDR-TSKSRGFAFITFENPADAKNAAKDMNGKSLHGKAIKVEQAKKPSFQSGGRRRPPASSRNRSPSG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ | |||||||||||||
7 | 6zu9p | 0.12 | 0.12 | 4.18 | 1.26 | SPARKS-K | --EFNFDQYIVVNGAPVPVLKKALTSLFSKAGKVVNMEFPIDEATGKTKGFLFVECGSMNDAKKIIKSFHGKRLD-LKHRLFLYTMKDVERYKSWLMDDKVRDQFVLQDDVKTSVFWNSMFNEEDSLVESRENWSTNYVRFSPKGTYLFSYHQQGPNFDRLRRFYHPDVRNSSVSPNEKYLTEPIIVEEDNEFSPFTKKNEGHQLCIWDIASGLLMATFPVIKSPYLKWPLVRWSYNDKYCARMVGDSLIVHDFMPLEAKALKPSGIRDFSFAPEDEPSVLLAYWTPETNNSACTATIAEVPRGRVLKTVNLVQVQNQAEVERHTKSGKTQFSNLQICRLTERDIPVEKVELKDSEPHGNRFVTISVHEVADMNYAIPANTETKEKTDVI | |||||||||||||
8 | 2mjnA | 0.35 | 0.07 | 2.07 | 1.64 | CNFpred | -------FHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
9 | 1ej6A | 0.11 | 0.08 | 2.78 | 0.67 | DEthreader | -RNQRTNNIVAVQLFRPLQGL-------------FDDWEFMLSN-QAGRKYLQM-------DDPPLFAKDLYAKAYLTMLLETNRWLSS-------LRPDYGNIWRKIGDRSLVKDAVYSDVVLLSSCMHATAPGSFLNITS---------------------GV-QHSSL--TSG-----------------------------SRQLPSYSSVT--PA-ARFVSSAVYDGDVVL------D-L----G-TGPEAILTCVDIRPTALELDYLWITVRGDIVTCMLS-GA-VQVNCPTDVVINKRYRFPYD-LSYSASI-I--LM--Y------VDSPDVVNPYYRLMTANPDKFQ----DYLAPDMRELNFVL--WDVLTDTISWSPSI | |||||||||||||
10 | 7kdnE | 0.06 | 0.05 | 2.42 | 1.13 | MapAlign | RGVKKGDTVAIYLPVFAGFSSDSLRDRVLDAGSKVVITTDEGKRGGKVIGTKVLYKRRDIWWHEEVFLLYTSGSTGKPKGVMHTTAGYLLGAAMTGKYVFDIHDDDRFFCGGDVGWITGHTYVVYAPLLLGCSTVVFESTPAYPNFSRYWDVIEKHKVTQFYVAPTALRLLKRAGDEHLGSVGEPIAAEVWKWYFEKVGKEEAHICDTYWQTETGSHVISPLGGITSTKPGSASLPFFGIEPAIIDPVSGEEISGNDVEGVLAFKQPWPSMARTVWGAHKRYMDTYLNVYKGYYF--------------TGDGAGRDHDGYYWIRGRVDDVVNVSGHRLSTAEIEAALIEHHQVAEAAVVGIADELTGQAVNAFVSPKAVFVVRRILRKI | |||||||||||||
|
|
Top 10 structural analogs in PDB (as identified by
TM-align)
|
|
Top 5 enzyme homologs in PDB
|
Template proteins with similar binding site:
|
References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |