Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320
| | | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHSSSSCCCCSSSSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC MWSCSWFNGTGLVEELPACQDLQLGLSLLSLLGLVVGVPVGLCYNALLVLANLHSKASMTMPDVYFVNMAVAGLVLSALAPVHLLGPPSSRWALWSVGGEVHVALQIPFNVSSLVAMYSTALLSLDHYIERALPRTYMASVYNTRHVCGFVWGGALLTSFSSLLFYICSHVSTRALECAKMQNAEAADATLVFIGYVVPALATLYALVLLSRVRREDTPLDRDTGRLEPSAHRLLVATVCTQFGLWTPHYLILLGHTVIISRGKPVDAHYLGLLHFVKDFSKLLAFSSSFVTPLLYRYMNQSFPSKLQRLMKKLPCGDRHCSPDHMGVQQVLA |
1 | 2ks9A | 0.16 | 0.14 | 4.71 | 1.33 | DEthreader | | -DNVLPV---SDLSPNIQFVQPAWQIVLWAAAYTV-IVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAANTVVNFTYAVHNE-W--YYGLFYCKFHNFFPIAAVFASIYSMTAVAFDRYMAIIHPLQPRLSATATKVVICVIWVLALLLAFPQGYYSTTE-------CMIEEHYEKVYHICVTVLIYFLPLLVIGYAYTVVGITLWASESDRYHEQSAKRKVVKMMIVVVCTFAICWLPFHIFFLLPYINP----DLYLKKFI--QQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHAFRC-C-----PFISAGDY----- |
2 | 4n6hA2 | 0.16 | 0.14 | 4.77 | 1.91 | SPARKS-K | | --------------SPGARSASSLALAIAITALYSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALATSTLPFQSAKYLME---TWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALRTPAKAKLINICIWVLASGVGVPIMVMA-VTRPRDGAVVCMLQYWDTVTKICVFLFAFVVPILIITVCYGLMLLRLRSVRLLSGSKERSLRRITRMVLVVVGAFVVCWAPIHIFVIVWTLV---DIDRRDP---LVVAALHLCIALGYANSSLNPVLYAFLDENFKRCFRQLCRKPCG----------------- |
3 | 4n6hA | 0.16 | 0.14 | 4.79 | 0.63 | MapAlign | | -KTTRNAYIQKYLGSPGARSASSLALAIAITALYSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALATSTLPFQSAKY---LMETWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKAFRTPAKAKLINICIWVLASGVGVPIMVMAVTRPR-DGAVVCMLQFWDTVTKICVFLFAFVVPILIITVCYGLMLLRLRSVRLLSGSKEKDLRRITRMVLVVVGAFVVCWAPIHIFVIVWTL-------VDIDRRPLVVAALHLCIALGYANSSLNPVLYAFLDENFKRCFRQLCR--------------------- |
4 | 4n6hA2 | 0.15 | 0.14 | 4.53 | 0.36 | CEthreader | | --------------SPGARSASSLALAIAITALYSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALATSTLPFQSAKYL---METWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKAFRTPAKAKLINICIWVLASGVGVPIMVMAVTRPRDGAVVCMLQWYWDTVTKICVFLFAFVVPILIITVCYGLMLLRLRSVRLLSGSKEKDLRRITRMVLVVVGAFVVCWAPIHIFVIVWTLV------DIDRRDPLVVAALHLCIALGYANSSLNPVLYAFLDENFKRCFRQLCRKPCG----------------- |
5 | 2ks9A | 0.16 | 0.16 | 5.19 | 1.48 | MUSTER | | VLPVDSDLSPNISTNTSEPNQQPAWQIVLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAVHN--EWYYGLFYCKFHNFFPIAAVFASIYSMTAVAFDRYMAIIHPLQPRLSATATKVVICVIWVLALLLAFPQGYYSTTETMPSR-VVCMIEWPEKVYHICVTVLIYFLPLLVIGYAYTVVGITLWASEIPGDEQVSAKRKVVKMMIVVVCTFAICWLPFHIFFLLPYIN------PDLYLKKFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHAFRCCPFISAGDYEGLEMKSTRYL |
6 | 5zbhA | 0.15 | 0.13 | 4.44 | 1.31 | HHsearch | | ----------------DDCHLPLAMIFTLALAYGAVII-LGVSGNLALIIIILKQKEMRNVTNILIVNLSFSDLLVAIMLPFTFVYT---LMDHWVFGEAMCKLNPFVQCVSITVSIWSLVLIAVERHQLIINPRGWRPNNRHAYVGIAVIWVLAVASSLPFLIYQVMTDEPKDKYVCFDQFPSLSYTTLLLVLQYFGPLCFIFICYFKIYIRLKRRNIFNKYRSSETKRINIMLLSIVVAFAVCWLPLTIFNTVFDWNHQIIAT------CNHNLLFLLCHLTAMISTCVNPIFYGFLNKNFQRDLQFFFNFCD------------------ |
7 | 5wb1A1 | 0.19 | 0.17 | 5.41 | 3.07 | FFAS-3D | | ---CV-------------FTDVLNQSKPVTLFLYGVVFLFGSIGNFLVIFTITWRRRIQCSGDVYFINLAAADLLFVCTLPLWMQYLLDH----NSLASVPCTLLTACFYVAMFASLCFITEIALDRYYAIVYMRY--RPVKQACLFSIFWWIFAVIIAIPHFMVVTKKDNQCMTDYDYLESYPIILNVELMLGAFVIPLSVISYCYYRISRIV------AVSQSRHKGRIVRVLIAVVLVFIIFWLPYHLTLFVDTLKLLKWISSSCEFERSLKRALILTESLAFCHCCLNPLLYVFVGTKFRQELHCLLAEFRLVPR-------------- |
8 | 6wwzR | 0.19 | 0.17 | 5.60 | 1.02 | EigenThreader | | -------YSVDSEMLLCSLQEVRQFSRLFVPIAYSLICVFGLLGNILVVITFAFYKKARSMTDVYLLNMAIADILFVLTLPFWAVSHATG---AWVFSNATCKLLKGIYAINFNCGMLLLTCISMDRYIAIVQFRLRSRTLPRSKIICLVVWGLSVIISSSTFVFNQKYNTQGSDVCEPKYQTVLLMLGLELLFGFFIPLMFMIFCYTFIVKTLV------QAQNSKRHKAIRVIIAVVLVFLACQIPHNMVLLVTAANLG-KMNRSCQSEKLIGYTKTVTEVLAFLHCCLNPVLYAFIGQKFRNYFLKILKDLWC----------------- |
9 | 4buoA | 0.15 | 0.13 | 4.26 | 1.63 | CNFpred | | ------------------------YSKVLVTAIYLALFVVGTVGNSVTLFTLARKK-LQSTVDYYLGSLALSDLLILLLAMPVELYNFIWVHHPWAFGDAGCRGYYFLRDACTYATALNVVSLSVELYLAICHPFKALMSRSRTKKFISAIWLASALLAIPMLFTMGLQNTHPGGLVCTPIVTLKVVIQVNTFMSFLFPMLVASILNTVIANKLTVMVHQ-PGRVQALRRGVLVLRAVVIAFVVCWLPYHVRRLMFCYISDEQW--TTFLFDFYHYFYMLTNALVYVSAAINPILYNLVSANFRQVFLSTL---------------------- |
10 | 2hpyA | 0.15 | 0.14 | 4.55 | 1.33 | DEthreader | | -NGTEGPFY--FSNKTVVYLAEPWQFSMLAAYMFL-LIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGFTTTLYTSLHGY-F--VFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYI----Q-SCIDTPNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQESATTKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQ---G-SD--F-G--PIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCC-G-----KNP-LGDD----- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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