>Q96B42 (140 residues) MPSAFSVSSFPVSIPAVLTQTDWTEPWLMGLATFHALCVLLTCLSSRSYRLQIGHFLCLV ILVYCAEYINEAAAMNWRLFSKYQYFDSRGMFISIVFSAPLLVNAMIIVVMWVWKTLNVM TDLKNAQERRKEKKRRRKED |
Sequence |
20 40 60 80 100 120 140 | | | | | | | MPSAFSVSSFPVSIPAVLTQTDWTEPWLMGLATFHALCVLLTCLSSRSYRLQIGHFLCLVILVYCAEYINEAAAMNWRLFSKYQYFDSRGMFISIVFSAPLLVNAMIIVVMWVWKTLNVMTDLKNAQERRKEKKRRRKED |
Prediction | CCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC |
Confidence | 99875356422469999996578745999999999999999999947865468999999999996789999999999998330562799826402788889999999999999999999999999999999999976249 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 | | | | | | | MPSAFSVSSFPVSIPAVLTQTDWTEPWLMGLATFHALCVLLTCLSSRSYRLQIGHFLCLVILVYCAEYINEAAAMNWRLFSKYQYFDSRGMFISIVFSAPLLVNAMIIVVMWVWKTLNVMTDLKNAQERRKEKKRRRKED |
Prediction | 63452625522540330143040420100001322321332002024343010010131121013133015204620540374411254020001333333333133322231330041025114552455445566788 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 | | | | | | | | |||||||||||||
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SS Seq | CCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC MPSAFSVSSFPVSIPAVLTQTDWTEPWLMGLATFHALCVLLTCLSSRSYRLQIGHFLCLVILVYCAEYINEAAAMNWRLFSKYQYFDSRGMFISIVFSAPLLVNAMIIVVMWVWKTLNVMTDLKNAQERRKEKKRRRKED | |||||||||||||||||||
1 | 6r3qA | 0.05 | 0.04 | 2.04 | 1.00 | DEthreader | -------------YGFACLLWYTQSFSMCIEVLFLYGLFIMSQVRSSASATFSSFCQLSSMRSSLATVGAGPLLLLLASIGQEILVF--F-LLLLLVWFLNREFEVSYRLHYHGDVEADLHRTKIQSMRDQADWLLRNII | |||||||||||||
2 | 3jacA | 0.02 | 0.01 | 1.11 | 0.51 | CEthreader | ---------------------------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-----GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | |||||||||||||
3 | 5n9yA | 0.07 | 0.06 | 2.67 | 0.62 | EigenThreader | NGSTDERQRKVLALDDVVSPTDCGGWLVDVCDALTDHSSEFIEQLHDKIKQLIVMRRYMAPQRDVYARLAS---------ERLPWMSDDQRRRMQDIADRLGRGLDEIDACIARTGVMADEIAQVMQENLARRTLMAMVF | |||||||||||||
4 | 7cm3A5 | 0.09 | 0.08 | 3.02 | 0.82 | FFAS-3D | QPLHLPPRPDNDGFRAKMYDI-TQHPFFKRTIALLVLAQSVLLSVEDPVTVPLATMSVVFTFIFVLEVTMKIIAMSPAGFWQSNRYD----LLVTSLGVVWVVLHFALLNAYTYMMGACVIVFRFFSICGK--------- | |||||||||||||
5 | 5u71A1 | 0.12 | 0.11 | 4.01 | 0.81 | SPARKS-K | QLESEGRSPIFTHLVTSLKG-------LWTLRAFGRQPYFETLFHKALNLHTANWFLYLSTLRWFQMRIEMIFVIFFIAVTFISILGEGEGRVGIILTLAMNI---MSTLQWAVNSSIDVDSLMRSVSRVFKFIDMPTE- | |||||||||||||
6 | 5oqtA | 0.13 | 0.09 | 3.21 | 0.78 | CNFpred | -------------------------LGIGAIIGTGIFVLTGVAAAEAGPALVLSFILSGLACVFAALCYAEFASTVPVSGSAYTYSYTFGELIAWILGWDLILEYGVASSAVAVGWSGYFQGLL---------------- | |||||||||||||
7 | 6r3qA1 | 0.05 | 0.04 | 2.04 | 1.00 | DEthreader | -------------YGFACLLWYTQSFSMCIEVLFLYGLFIMSQVRSSASATFSSFCQLSSMRSSLATVGAGPLLLLLASIGQEILVF--F-LLLLLVWFLNREFEVSYRLHYHGDVEADLHRTKIQSMRDQADWLLRNII | |||||||||||||
8 | 2iubG | 0.07 | 0.07 | 2.92 | 0.63 | MapAlign | RERIRYNRGIIRKKRADYLLYSLIDALVDDYFVLLEKIDDEIDVLVETVQRTHQLKRNLVELRKTIWPLREVLSSLYIEKETVPYFRDVY-DHTIQIADTVETFRDIVSGLLDVYLSSVSNKTNEVMKVLTIIATIFMPL | |||||||||||||
9 | 5oqkA | 0.10 | 0.10 | 3.66 | 0.58 | MUSTER | -SHMRAPLDFRGMLRKLFSS--RFQVIIICLVVLDALLVLAELILDPDKNNYAAMVFHYMSITILVFFMMEIIFKLFVF--RLEFFHKFEILVVVVVSFILDIVLLFQEALGLLILLRLWRVARIINGIIISVKTRSER- | |||||||||||||
10 | 3jacA | 0.16 | 0.16 | 5.24 | 0.84 | HHsearch | HTKYFGKHSAATDIASSLSDDQVPQAFLFMVVAIHIWMFFILPVTERMFVAQLWYFVKCIYFALSAYQIRCYPTRILGNFLTKKYNHLNLFLFQGFRLVPFLVELRA-VMDWVWTDTTLIIKCSRETEKKYPQPKGQKKK | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |