Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560
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| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCSSSSSSCHHHHCCCHHHHHHHHHHHCCCSSSSSCCCCCCSSSSSSSCCCCCCCCCCCCCCSSSSSSSHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCSSSSSSCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCSSSSCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCSSCCCCCCCSSSCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC MALKKSSPSLDSGDSDSEELPTFAFLKKEPSSTKRRQPEREEKIVVVDISDCEASCPPAPELFSPPVPEIAETVTQTQPVRLLSSESEDEEEFIPLAQRLTCKFLTHKQLSPEDSSSPVKSVLDHQNNEGASCDWKKPFPKIPEVPLHDTPERSAADNKDLILDPCCQLPAYLSTCPGQSSSLAVTKTNSDILPPQKKTKPSQKVQGRGSHGCRQQRQARQKESTLRRQERKNAALVTRMKAQRPEECLKHIIVVLDPVLLQMEGGGQLLGALQTMECRCVIEAQAVPCSVTWRRRAGPSEDREDWVEEPTVLVLLRAEAFVSMIDNGKQGSLDSTMKGKETLQGFVTDITAKTAGKALSLVIVDQEKCFSAQNPPRRGKQGANKQTKKQQQRQPEASIGSMVSRVDAEEALVDLQLHTEAQAQIVQSWKELADFTCAFTKAVAEAPFKKLRDETTFSFCLESDWAGGVKVDLAGRGLALVWRRQIQQLNRVSLEMASAVVNAYPSPQLLVQAYQQCFSDKERQNLLADIQVRRGEGVTSTSRRIGPELSRRIYLQMTTLQPHLSLDSAD |
1 | 1vw1A | 0.07 | 0.04 | 1.71 | 0.67 | DEthreader | | --------------------------P-----------LSDEELSQFIG-ASNFGQ----------------Q-----NQLITPVVKYNQYSFLLKLNKAILSRLSPILEI-TVLGKVFLTKYYMQRYAIHATALILISYDQPQ-------------------------FN-SNLYIGKLADIHQTSWHT---VQLVLLDYPTYWLSRSAALSTYIRLYQYLLISIQLYVNALVISRQFFID---------IGQTKMQVANLKVYFWRSVDHSKFANAWSEWHKIDCPIRPVI----------------YKSRLYL---LWLEQ-KE-----------RYELK--LA--HI-RYDGTWN-P---------KISELKL--EK---------------NRAPGLMFYNSMQGL-YIFADMAS--YNSYQFRRVNNRY----------V--SR-KD-YGWGDYY-SMVYNGDI---------RIIHNGYEKRNQCNLMNKYGKLGDKF---IVYT-L--------FYPVYQYSGNTSG-------GRLLFHDDYALITDVSGP---------- |
2 | 2zivB | 0.96 | 0.45 | 12.74 | 1.72 | SPARKS-K | | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ECLKHIIVVLDPVLLQMEGGGQLLGALQTMECRCVIEAQAVPCSVTWRR---------DWVEEPTVLVLLRAEAFVSMID------------NGKTLQGFVTDITAKTAGKALSLVIVDQEKYFR--------------------------SQLPEVSRVDAEEALVDLQLHTEAQAQIVQSWKELADFTCAFTKAVAEAP---LRDETTFSFCLESDWAGGVKVDLAGRGLALVWRRQIQQLNRVSLEMASAVVNAYPSPQLLVQAYQQCFSDKERQNLLADIQVRRGES---TSRRIGPELSRRIYLQMTTLQPHLSLDS-- |
3 | 6sxaF | 0.07 | 0.06 | 2.31 | 1.15 | EigenThreader | | TDRIPSDLITRAHRIIESCQEAFILRLFRQKNKRG-------FIKAFTDNAVAFDTGFCHFVRKLPRFHVAVNSPEVVEIHVSMTPTMLAIQTAILDILNACLKELKCHNPSLEVEDLSLENAIGKPFDKTIRHYLDPLWHQLGATEKAFGQNSGWLFLDSSTSMFINARARVYHLPDAKMSKKEKISEKMEGEETKKELVLAEAFLLRLYRKTFTFVRQLEIYREEQRYLTALRKEKEAFEKLIREKASMSIVVDMREFRSE-----LPSLIHRRGIDIEPVTLEVGDYIL----------TPE-----MCVERKSISDLIGSLNN------------GRLYSQCISMSRYY---KRPVLLIEFD------------------------PSKPFSLTSEISSND-ISSKLTLLTLHFPRLRILWCPSPHATAELFEELK------------QSKPQPDAATADSETLPESEKYNPGPQDFLLKMP-----GVNAKNCRSLMHHELA---------ALSQDELTSILG----------------NAANAKQLYDFIH--TSFA------- |
4 | 2zivB | 0.96 | 0.45 | 12.65 | 1.39 | MapAlign | | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ECLKHIIVVLDPVLLQMEGGGQLLGALQTMECRCVIEAQAVPCSVTWRR---------DWVEEPTVLVLLRAEAFVSMID------------NGKTLQGFVTDITAKTAGKALSLVIVDQEKYF--------------------------RSQLPEVSRVDAEEALVDLQLHTEAQAQIVQSWKELADFTCAFTKAVAEA---PLRDETTFSFCLESDWAGGVKVDLAGRGLALVWRRQIQQLNRVSLEMASAVVNAYPSPQLLVQAYQQCFSDKERQNLLADIQVRR---GESTSRRIGPELSRRIYLQMTTLQPHLSLDS-- |
5 | 2zivB | 0.97 | 0.46 | 12.79 | 1.25 | CEthreader | | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ECLKHIIVVLDPVLLQMEGGGQLLGALQTMECRCVIEAQAVPCSVTWRR---------DWVEEPTVLVLLRAEAFVSMIDNGK------------TLQGFVTDITAKTAGKALSLVIVDQEKYFRSQL--------------------------PEVSRVDAEEALVDLQLHTEAQAQIVQSWKELADFTCAFTKAVAEAPLR---DETTFSFCLESDWAGGVKVDLAGRGLALVWRRQIQQLNRVSLEMASAVVNAYPSPQLLVQAYQQCFSDKERQNLLADIQVRRGES---TSRRIGPELSRRIYLQMTTLQPHLSLDS-- |
6 | 2zivB | 0.96 | 0.45 | 12.65 | 1.36 | MUSTER | | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ECLKHIIVVLDPVLLQMEGGGQLLGALQTMECRCVIEAQAVPCSVTWRRD---------WVEEPTVLVLLRAEAFVSMIDN------------GKTLQGFVTDITAKTAGKALSLVIVDQEKYF--------------------------RSQLPEVSRVDAEEALVDLQLHTEAQAQIVQSWKELADFTCAFTKAVAEAPLR---DETTFSFCLESDWAGGVKVDLAGRGLALVWRRQIQQLNRVSLEMASAVVNAYPSPQLLVQAYQQCFSDKERQNLLADIQVRRGES---TSRRIGPELSRRIYLQMTTLQPHLSLDS-- |
7 | 2zivB | 0.96 | 0.45 | 12.64 | 5.87 | HHsearch | | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ECLKHIIVVLDPVLLQMEGGGQLLGALQTMECRCVIEAQAVPCSVTWRR---------DWVEEPTVLVLLRAEAFVSMID-------------NGTLQGFVTDITAKTAGKALSLVIVDQEKYFRSQL--------------------------PEVSRVDAEEALVDLQLHTEAQAQIVQSWKELADFTCAFTKAVAEAPLRD---ETTFSFCLESDWAGGVKVDLAGRGLALVWRRQIQQLNRVSLEMASAVVNAYPSPQLLVQAYQQCFSDKERQNLLADIQVRRGE---STSRRIGPELSRRIYLQMTTLQPHLSLDS-- |
8 | 2zivB | 0.94 | 0.44 | 12.46 | 2.59 | FFAS-3D | | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ECLKHIIVVLDPVLLQMEGGGQLLGALQTMECRCVIEAQAVPCSVTWRRDWVE---------EPTVLVLLRAEAFVSMI------------DNGKTLQGFVTDITAKTAGKALSLVIVDQEKYFRSQLP--------------------------EVSRVDAEEALVDLQLHTEAQAQIVQSWKELADFTCAFTKAVAEAPLR---DETTFSFCLESDWAGGVKVDLAGRGLALVWRRQIQQLNRVSLEMASAVVNAYPSPQLLVQAYQQCFSDKERQNLLADIQVRRGES---TSRRIGPELSRRIYLQMTTLQPHLSLDS-- |
9 | 4p0pB | 1.00 | 0.49 | 13.66 | 2.42 | CNFpred | | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RMKAQRPEECLKHIIVVLDPVLLQMEGGGQLLGALQTMECRCVIEAQAVPCSVTWRRRAGPSEDREDWVEEPTVLVLLRAEAFVSMIDNGK------------TLQGFVTDITAKTAGKALSLVIVDQEKCF--------------------------------VSRVDAEEALVDLQLHTEAQAQIVQSWKELADFTCAFTKAVAEAPFKKLRDETTFSFCLESDWAGGVKVDLAGRGLALVWRRQIQQLNRVSLEMASAVVNAYPSPQLLVQAYQQCFSDKERQNLLADIQVRR------TSRRIGPELSRRIYLQMTTLQPHLSL---- |
10 | 6l7eA | 0.06 | 0.04 | 1.54 | 0.67 | DEthreader | | --------------------------------------------NFIEPASLAMP--------------EYLKRNLSDELFIIPKVEYNQYSFLLKLNKAIRLSRATEL-----------------------GKVFLTKYYMQRYA-----------------------IH-ALIRKLNITSWHTQVNVQQLNVGVALGLPTYAWER-ALSTYYQVAKLYYLLSILYVRALANVISRQFFID----------IGQTKVLKVISATYFRSVDHSKFNAANAWSEWHKIDC---------------------KSRLYL---LWLEQ-KE------------YELKL-AH--IRYDGT-WN-----------KKISELKL--E-------------K-NRAPGLVMFYMQGLYIFADMASK-----YNSQQRVNNRYA---E--P--VS-SRKDY-----YLSMVYNGD-P----PKL-R--IIHNGYEGQKRNQCN-LMNKYGKLGDKFIVVYQYSGRLAWIPAKRSLTNQNAA----------IGDDYATDMT-ATDVSGPV--------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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