Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCCSSSSSSSSCCCCCHHHCCCCCCCSSSSSSCCCCCSSSSCCSSSSSSSCCCCCSSSSSSCCCCCCCCCCCCCCCSSSSSSCCSSSSSSSSSSSCCCCCCCCCCCCSSSSCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSCCC MAAAADERSPEDGEDEEEEEQLVLVELSGIIDSDFLSKCENKCKVLGIDTERPILQVDSCVFAGEYEDTLGTCVIFEENVEHADTEGNNKTVLKYKCHTMKKLSMTRTLLTEKKEGEENIGGVEWLQIKDNDFSYRPNMICNFLHENEDEEVVASAPDKSLELEEEEIQMNDSSNLSCEQEKPMHLEIEDSGPLIDIPSETEGSVFMETQMLP |
1 | 2c35B | 0.05 | 0.04 | 1.94 | 0.51 | CEthreader | | ------------------MFYHISLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGVIQPGRG--------------FVLYPVKYKAIVFRPFK----GEVVDAVVTQVNKVGLFTEIGPMSCFISRHSIPSEMEFDPNSNPPCYKTMDEDIVIQQDDEIRLKIVGTRVDKNDIFAIGSLMDDYLGLV------ |
2 | 4xpoA | 0.04 | 0.04 | 1.92 | 0.82 | EigenThreader | | ------------NWTEIYPWKATVGKPESYDLLKAAGAEEQLYGFELHVDPTPFYVSSGYGVFINS--ARYIKVWAGTGVRKDSENFPPYSDAVEILVPAE----GVEVYVFGGPKPIDAVKRYNLLNGGGYLPPRWGLGFTQRVMTRYTVGLEPGWQSKAYTSFVKKMKDQGIRLN--LWINPYVWLGLVPDFTMAEARKPFFNQLLKDQIE |
3 | 4bjjB | 0.18 | 0.07 | 2.30 | 0.71 | FFAS-3D | | --------------SLETDVENIVFQFQ---NSSLDFQSSDDFSILGIDQPHPIVRIGGMFFRGTWHQPIGTDIVVPSVNDG-------------LVLCKRRLMLEQIRLVPKN--------------------------------------------------------------------------------------------------- |
4 | 6wtsC | 0.11 | 0.10 | 3.70 | 0.73 | SPARKS-K | | ---RFISLTFSILEDIIEIDILLSGNCIKLIEN--SSDIQQKIDHIGFNGEQKYIPYNETKYNGFIDYSKKEGLFTAEFSNEYMP--DSNNLFIYSSKDLKDIRIIVKLLIGNYFKDNMK-VSLSFTIEDT---NTIKLNGVYLDENGVAQILKFMNLMNFLESINIKNINLDPNIKFILDTNFIISGQFE---LICDKDKNIQPYFI----- |
5 | 4bjjB | 0.16 | 0.06 | 2.02 | 0.87 | CNFpred | | ------------------DVENIVFQFQNSS---LDFQSSDDFSILGIDQPHPIVRIGGMFFRGTWHQPIGTDIVVPSVND-------------GLVLCKRRLMLEQIRLVPKN--------------------------------------------------------------------------------------------------- |
6 | 6riwA | 0.04 | 0.03 | 1.45 | 0.67 | DEthreader | | ----------------ENIAVVIANWGLLVGY--A-------SHFALDAACSSYSLACDLMLAGAVSAA---------------------------------AGMMVYAIKGYVDPSTVDYEAVSAHL--RNVAV-LVAMGMELLHQYRGNLTTEVEQEENDASAAQLQYTSFGVDLSGSNITRQGPQFSANNESSVSKLLLIALILS----- |
7 | 3g7tA | 0.08 | 0.08 | 2.98 | 0.68 | MapAlign | | ------CVGIGNRDFVEGLSGATWVDVVLEHGSCVTTMPTLDIELLKTENLKYSVIVTVTIATITLDCSPRTGLSWLVLVTFKTAHAQEAVVATEIQTGHLKCRLKMDKLTLKGISYVMCTGSFKLEKEVAETQHGTVLVQVKYEGTDAPCKIPFSSQDEKGVTQNGRLVTANPIVTDKEKPVNIEAEPPFGESYIVVGAGEKALKLS----- |
8 | 4bjjB | 0.16 | 0.07 | 2.17 | 0.75 | MUSTER | | --------------SLETDVENIVFQFQNSSL---DFQSSDDFSILGIDQPHPIVRIGGMFFRGTWHQPIGTDIVVPSVND-------------GLVLCKRRLMLEQIRLVPKNP-------------------------------------------------------------------------------------------------- |
9 | 4bjjB | 0.17 | 0.07 | 2.17 | 5.27 | HHsearch | | ---------------SLEDVENIVFQFQNSSL---DFQSSDDFSILGIDQPHPIVRIGGMFFRGTWHQPIGTDIVVPSVND-------------GLVLCKRRLMLEQIRLVPKNP-------------------------------------------------------------------------------------------------- |
10 | 1ffkF | 0.05 | 0.03 | 1.52 | 0.48 | CEthreader | | GIPGKGIAQFKMGNNGAGPTYPAQVENVVEKPVQIRHNALEAARNAANRFVQNSGAAANYKFRIR-------KFPFHVIREQDGDRAPFGKSVGTAARSHGANHDFIAWVNPDPA------VEFAWRRAYMKVTPTVNIDSSPAGNA------------------------------------------------------------------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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