>Q93063 (183 residues) ESSNDWNVEKRSIRDVPVVRLPADSPIPERGDLSCRMHTCFDVYRCGFNPKNKIKVYIYA LKKYVDDFGVSVSNTISREYNELLMAISDSDYYTDDINRACLFVPSIDVLNQNTLRIKET AQAMAQLSRWDRGTNHLLFNMLPGGPPDYNTALDVPRDRALLAGGGFSTWTYRQGYDVSI PVY |
Sequence |
20 40 60 80 100 120 140 160 180 | | | | | | | | | ESSNDWNVEKRSIRDVPVVRLPADSPIPERGDLSCRMHTCFDVYRCGFNPKNKIKVYIYALKKYVDDFGVSVSNTISREYNELLMAISDSDYYTDDINRACLFVPSIDVLNQNTLRIKETAQAMAQLSRWDRGTNHLLFNMLPGGPPDYNTALDVPRDRALLAGGGFSTWTYRQGYDVSIPVY |
Prediction | CCCCCCCSSHHHHHHCCCSSCCCCCCCCCCCCCCCCSSCCCCCCCCCCCCCCCCSSSSSCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHCHCSSSSSSCCCCCCCCCCHHHHHHHHHHCCCCCCCCCSSSSSSCCCCCCCCCCCCCCCCCCSSSSSCCCCCCCCSCCCCSSSSCC |
Confidence | 986444301011421872417776778877788764311345223577788984799957975556567887664599999999999719851599221839986124223344561468888750777679875699995489976655455877672699854787354408973898488 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 | | | | | | | | | ESSNDWNVEKRSIRDVPVVRLPADSPIPERGDLSCRMHTCFDVYRCGFNPKNKIKVYIYALKKYVDDFGVSVSNTISREYNELLMAISDSDYYTDDINRACLFVPSIDVLNQNTLRIKETAQAMAQLSRWDRGTNHLLFNMLPGGPPDYNTALDVPRDRALLAGGGFSTWTYRQGYDVSIPVY |
Prediction | 856744414433045124431365353466454503141000112034457750200001374235445542554235304301510572413163164010000323324444143640353064153255030000000143425434542615433120030414353114220000236 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
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SS Seq | CCCCCCCSSHHHHHHCCCSSCCCCCCCCCCCCCCCCSSCCCCCCCCCCCCCCCCSSSSSCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHCHCSSSSSSCCCCCCCCCCHHHHHHHHHHCCCCCCCCCSSSSSSCCCCCCCCCCCCCCCCCCSSSSSCCCCCCCCSCCCCSSSSCC ESSNDWNVEKRSIRDVPVVRLPADSPIPERGDLSCRMHTCFDVYRCGFNPKNKIKVYIYALKKYVDDFGVSVSNTISREYNELLMAISDSDYYTDDINRACLFVPSIDVLNQNTLRIKETAQAMAQLSRWDRGTNHLLFNMLPGGPPDYNTALDVPRDRALLAGGGFSTWTYRQGYDVSIPVY | |||||||||||||||||||
1 | 4jc0A1 | 0.10 | 0.07 | 2.41 | 0.72 | CEthreader | ------------------------------------------------------RVGIKVL----------GCPKNEADCEVLAGVLREGGHIVFDVKDADVVVLD--TCAFIEDAKRESIDEIFSFVDAKDQYGYKLVVKGCLVQRYYEELKKEIPEVDQWIGVADPEEIANAIETDLVPDR | |||||||||||||
2 | 3zm8A | 0.08 | 0.07 | 2.81 | 0.67 | EigenThreader | GDSFAGQNTIDIVNNWGWTPSAPRPPHDINPNLGNKIISGQQELHHAEWIKTPALVAVDLMDYSPSRVERGTT-----------------SHAVEDAIAHGIVSVLWHWNAPVGLYDRDIDAIAVQLKRLEAAGVPVLWRPLHEAEGGWFWWGHHGLDNLIWVWNSIL---EDWYPGDDTVDI | |||||||||||||
3 | 6j17A | 0.14 | 0.14 | 4.63 | 0.36 | FFAS-3D | RLLPT-NLAPHAVGELYILDLAANPLLDARSGKTTLLRHII-RTVREHSTADRVAFTVLDRRLHLVDEPLANIDRIIPAMLGLANLIEARAELSRWTFAGHTHYLIIDDVYIGQRPWTPLIGLLAQ--AGDLG-LRVIVTMLAGNPADSGRFARLPAGRAILLTDSDSPTYV----QLINPL- | |||||||||||||
4 | 5ak1A | 0.11 | 0.10 | 3.55 | 0.64 | SPARKS-K | ---------ASPQRGRP--RLNAARTTFVGDNGQPLRGPYTSTEWTAAAPYDQIHLYAECFDPRYPAPGSKAPGYAVNEIDKIVERTREL--------GLYLVITIGNGANNGNHNAQWARDFWKFYPRYAK-ETHVLYEIHNEPVANPPGAVDEAPETPVLLFSYAVFGGKGGAAEALKDIR | |||||||||||||
5 | 1tvnA | 0.09 | 0.06 | 2.30 | 0.68 | CNFpred | --------------------------------------TVVNAAI-----AEDMYVIIDFHSHEAH--------TDQATAVRFFEDVATKY-----GQYDNVIYEIYNEPLQISWIKPYAETVIDKIRAI--DPDNLIVVGTPTWSQDVDVASPIDRANIAYTLHFYAGTHGQ-GIALFATEW | |||||||||||||
6 | 5k6lA | 0.06 | 0.05 | 2.33 | 0.83 | DEthreader | HYKSGTAGDFSFGDPRDYYPMESDDEKRL--DLAVRGFGGIPAVCCDMIYNKVELLGPGMNIH----------RNPLN--GRNFEY------ASAMLKGLDGVAKHFCCNSVVSQR-LRYLKGFEIAEGGC--K-AFMTTYAQVGMWNYDLNTRLRFKGIVMTDAQVNTAAMVRQNDLYMV-- | |||||||||||||
7 | 3e4cA | 0.04 | 0.03 | 1.70 | 0.89 | MapAlign | --------------------------------KLCSLEEAKSAEIYPIMDKSSRTRLALIICNEEFDSIPRRT-GAEVDITGMTMLLQLGYSVDPEHKTSDSTFLVFMSHGPDILQLNAIFNMLKNCPSL-KDKPKVIIIQAARGGVVWAIKKAHIEKDFIAFCSSTPQEYACSCDVMPTTER | |||||||||||||
8 | 1vw1A | 0.12 | 0.11 | 4.07 | 0.52 | MUSTER | QQFDTNNVRRVNNRYAEDYEIPSSVSSRKDGDYYLSMVYNGDIPTINYKASSDLKIYISPKLRIIHNGYEGQKRNQCNLMNKYGKLVYTSLGVNPNNSSNKLMFYPVYQYSGNTSGLNQGRLLF----HRDTTYPSKVEAWIP-GAKRSLTNQNAAIGDDYATDSLNKPDDLKQYIFMTDSKG | |||||||||||||
9 | 2pffB | 0.16 | 0.16 | 5.26 | 1.06 | HHsearch | GQTDDYFEELRDLYQTYHVLVIKFIFTILEWLENPPDKDYLLSISCPLIGVIQLAHYVTAFTPGELRHSQGLDSWES-FFVSVRKAVRYEAYPNTSLPPSILEVPSP-MLSISNLVQDYVNKTNSHLPAGKNGAKNLVVSLDQSRIPFSERKLKFS-NRFLPVASPFHNNVSFNAKDIQIPVY | |||||||||||||
10 | 4pyrA1 | 0.10 | 0.05 | 2.03 | 0.70 | CEthreader | ----------------------------------------------------KVRIGVILPAE---------SSALGEAAAVVRSGVE---AAAQVDQSAELYSVDAT--------GDNVVERYRAA--VADGVNVVIGPLSRDSIV----KLAPSVTVPTLALNSVGREAAANPKLYSL--- | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |