Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400
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| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCSSSSSSSSSSCCCCCCCCCCCCSSSSSSSCCCSHHHHHHCSSCCCCCCSCCCCCCCCCCCCCCCCCCCCCCCSSSSCCSSCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCSSSSSSSSCCCCSSSSSCCCCCSSSSSSSSSSCCCCCCCCCCCCCSSSSSCCCCCCCCCCCCCCSSSSSSSCCCCCCCCCCHHHHHHHHHHCCCCCCCSSCCSSSSSSCCCCCCC MAEGSRGGPTCSGVGGRQDPVSGSGGCNFPEYELPELNTRAFHVGAFGELWRGRLRGAGDLSLREPPASALPGSQAADSDREDAAVARDLDCSLEAAAELRAVCGLDKLKCLEDGEDPEVIPENTDLVTLGVRKRFLEHREETITIDRACRQETFVYEMESHAIGKKPENSADMIEEGELILSVNILYPVIFHKHKEHKPYQTMLVLGSQKLTQLRDSIRCVSDLQIGGEFSNTPDQAPEHISKDLYKSAFFYFEGTFYNDKRYPECRDLSRTIIEWSESHDRGYGKFQTARMEDFTFNDLCIKLGFPYLYCHQGDCEHVIVITDIRLVHHDDCLDRTLYPLLIKKHWLWTRKCFVCKMYTARWVTNNDSFAPEDPCFFCDVCFRMLHYDSEGNKLGEFLAYPYVDPGTFN |
1 | 2i1sB | 0.13 | 0.06 | 2.01 | 1.18 | CEthreader | | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KKTFEKVYHLKLSIKGI-----TPQIWRRIQVPENYTFLDLHKAIQAVMD-------------------WEDYHLHEFEMVNPKTGMLDKIGAEGDDGG---------------PLVSEKKAKLSDYFTLENKEALYTYDDNWQVKVRLEKILPRKEGV-----EYPICTAGKRAA---------------VPEDSGGVWGYEEMLEVLKEHEEYEDTVLWLGDDFDPEYFDPKDVS |
2 | 6xljD | 0.06 | 0.06 | 2.70 | 1.11 | MapAlign | | PLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQEAVDALLTGSNKRPLKSLADMIKGKQGRFRQKPFIYGKLELRGLATIKAAKKMVERCAAYNADFDGDQMAVHVPLTLEAQLEAPIIVPSQDVVLGLYYMTRDCVNAKGEGMVLTGPKEAERLYRSGLAS-LHARVKVRITEYEKDANGELVAKTSLKDTTVGGDVKEPLRDRVLGRVTAEDVLKPGTADILVPRNTLLVRNVKSVVNSGKLVITSTELKYGAVLAKGITRQTELTGLSSLVVLEARRPKEPAILAEISGIVSFGKETKGKRRLVITPVRPEAPHDILRLRGVAVTRYIVNEVQDVYRLQGVKILRKATIVNAGSDFLEGEQVEYSRVKIANLEANGKVG--ATYSRDLLGITKA |
3 | 2pffB | 0.15 | 0.14 | 4.82 | 1.37 | HHsearch | | MDAYSTRPLTVLLVPTASFFIASQLQEQLPEPADDEPTTPAELVGKFLGYVSSLVEPSKVGQFDQV-LNLCLTEFCYEGNDIHALAAKLLQETKELIKNYITA-RIMAKRKKSNSALFRAVGEGNYFEELRDLYGDLIKFAELSELIRTLDAEKFTQGL---NILEWLENPS-NTPDKDYLLSIPISCPLIGVI--QLAHYVVTAKLLGFTPGELRSYLKGATGHSQAVAISAYPNTPPSLENNEGVPSPMLSISNLTQE-----QVQDYVNKTNSHLPAGKQNKAPSGLDQ-SRIPFSERKLKFSNRFLPVASPFHSHLLVAKDIQIPVY-DTFDGSDLRVLSGSISERIVDCII--RLPVKWETTTTHILDFGPSGLGV----LTHRNKDGTGVRVIVAGTPDDDYGFK |
4 | 1vt4I3 | 0.05 | 0.05 | 2.43 | 0.66 | CEthreader | | IPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLK-----FYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAIFEEAHKQVQRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
5 | 2i1sB | 0.09 | 0.03 | 1.32 | 0.68 | EigenThreader | | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------KKTFEKVYHLKLSIKGI------TPQIWRRIQVPENYTFLDLHKAIQAVM-------------------DWEDYHLHEFEMNPLDKIGAEG---------------------DDGGPLVSEKKAKLSDYFTLENKELYTYDDNWQVKVRLEKILPRKEGVEY----PICTAGKRAAVPEEMLEVLKEHEE----------------YEDTVLWLGDDFDPEYFDPK--------DVSF |
6 | 3zfsA | 0.10 | 0.09 | 3.13 | 0.45 | FFAS-3D | | -SERIVISPTSRQEGHAELVMEVDDEGIVAPETAPVMVQRICGVCPIPHTLASVEAIDDSLDIEVPKAGRLLRELTLAAHHVNSHAIHHFLIAPDFSEIRKNAQYVVDMVAGEGIHPSDVRIDNITELARKRLYARLKQLKPKVNEHVELMIGLIEDKGLPEGLGVHNQPTLASHQI------------YGDRTKFDLDRFTEIMPESWYDDPEIAKRACSTIPLYDGRNVEVGPRARMVEFQGFKERGVV------AQHVARALEMKTALSRAIEILDELDTSAPVRADFDERGTG------KLGIGAIEAPRGLDVHMAKIQFYSALVPTT---WNIPTMGPATEGFHHEYGPHV-------------IRAYDP---CLSC--ATH----------------------- |
7 | 3iz3A | 0.11 | 0.09 | 3.35 | 0.71 | SPARKS-K | | TYIFTTIPTSMNYISNTGQGRIGATEHDVADIVLGQTGEDVI-------------TISMVEPMSIADTPTRDIWPADEQIEQKGDAVALYDTSR-ALGMFNNTVRIDDL-------------------LSPLLSLVYRTYIKTQGSLDHLTDSDITFVGNRMIAPLPEGYIPKPMHRNNSMLSLYVALKKLENFATNSYLMTSIILLGEPAVNILRRFNRNVSNVRIIGMGDRAVEPNIRVRVPFPAD---FIICDI---NSYDQSFESMFSETISVVTTCASAA-------------TRALVKINHPALLKTASQNETYIYITVRFPFYSNSAADDEM-----PIIPSIHTVIKGHSNPGLFCGCVDVQSAPLALSQLKSYCATTWRVDSDDNL---VNIIARIDPARIA |
8 | 4ddtA | 0.11 | 0.07 | 2.52 | 0.67 | CNFpred | | -------------------------------------------PRFVLARVLKEM--------------GLIKAQENPDVEELRKIAKEHLTQKEFVEKVKEMFRG-VVVKDED-----------LELIIPDVYTYIQAS----------------------------------------GRSSRILNGVLV-------KGVSVIFEEDEIFESLKTRLLLIAEEEIIEEAEANWKELVHEVEES-SRSLLIIVES-----------PTKAETLSRFLG-------RASSRKERNIIVHEAVTG--EGVILFTAT-RGHVYDLVGVEEE------NGKFVPVYNSL-----KRCRDCG----YQFTEDRDECPV-NIDDKTETLRALRE----ISLEADEILVATDPDVEG |
9 | 5kf6A | 0.07 | 0.05 | 2.06 | 0.67 | DEthreader | | ---QEGVALMCLA-----EALLRIPDTRRSLV---TTADAHPRQAARVMLRELSLDLEFVVQAGKRC--------KIHTDVSYIACAA--KLLAATFPQFALEFQCLIYAPAYLVRRLLEN-----------------------------------A-PAELNSAGLD---EETLASLT---------------------------L--IRAGKSNAENFIFTGSTARLQALAPIPLIAE-TG----SAGQAKALHLIVGPVITSEAKDNIEKHIERMRGLGRKVEQIGLATGVGTF---P---------EVFGVYGLTFGL-------------------GAVVVQPFGGRSDLASSALHARGRILLVPAIDWSGFAGA---L--VEGDAERIRAVNAIALLLWEEVSAS |
10 | 6wvjD | 0.06 | 0.06 | 2.69 | 1.08 | MapAlign | | QLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPSIIVQNEKRMLQEAVDALITGPGNRPLKSLSHMLKGKQGRFRQKPFVMKELVEKGLAHIKSAKRKIEMLAAQNILNPKDGKPVFKRFHITETSKMLDRMKNLGFKYSTKAAKDVIQGKLMKSLDELNPIYMMSDSGARGNASNFTQLAGMRGLMANPAGRIIELPIKSSFRAQDVIIRETDCGTDRGILAKPLKEGTETI--ERLEERLIGRFARVKHPETGEVLVNENELI----DEDKALEIVEAGIEEVTPHGVCVGEVGATITEIDGTVVEINEVRDKQEIVQGITRGQVLTEGSIDPKELLKVTDLTTVQEYLEVMVRQMLRKVRVIDAGDTDVPGTLLDIHQFTEANKKVLLEGNRPATGRPVLLGITKA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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