Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Download alignment | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| SS Seq | CCCCCCCCCCCHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCHCHHCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSCCCCCCHHHHHHHHHHHHHHHCCCCCCSSSSSSCCCSSSSSSCCCCCCCCHHHHHHHHHHHHHHHHHHHCCSSSSSCCCCCCCCCCCCCCCCCCCCCCSHHHHHHHHHHHHHHHHHHHHC KKSEHPESSLSSEEETAGVENVKSQTYSKDLLGQQPHSEPGAAAFGELQNQMPGPSKEEQSLPAGAQEALSDGLQLEVQPSEEEARGYIVTDRDPLRPEEGRRLVEDVARLLQVPSSAFADVEVLGPAVTFKVSANVQNVTTEDVEKATVDNKDKLEETSGLKILQTGVGSKSKLKFLPPQAEQEDSTKFIALTLVSLACILGVLLASGLI |
1 | 6vejA2 | 0.09 | 0.07 | 2.73 | 0.82 | EigenThreader | | ----MAKGGFNLSDWALR-------------------HQSLVWYLMAVSLVMGVFSYLNLGREED-------------PSFAIKTMVIQTRWPGATVDDTLEQVTDRIEKKLEELDSLDYVKSYTRPGVFVYLKDTTKAGDIPDIWYQVRKKISDIQGEFPQGIQGPGFNDEFGDVFGSVYAFTADGLDFRQLRDYVEKVRLDIR-----S |
2 | 2qt7B | 0.42 | 0.18 | 5.29 | 1.73 | SPARKS-K | | ----------------------------------------------------------------------------------AEEYGYIVTDQKPLSLAAGVKLLEILAEHVHMSSGSFINISVVGPALTFRIRHNEQNLSLADVTQQAGLVKSELEAQTGLQILQTGVGQRE-------------------------------------- |
3 | 7abiA | 0.05 | 0.04 | 1.72 | 0.83 | DEthreader | | ------------------IIIRQ--------------------EPPPLLYKW--GI-NLQDV----------------SEGE-CNVMLESREKMVQGLVMDLLVLGL-R-----AAHPIRLFCRYIDRIHIFFRFTADARHDVNLGRAVFWDKNRLPRSVTTVQNSFVSVYNLLFNEVDDESMQRFHNRVRQILMSITRIKIGLNSKIPTK |
4 | 2qt7B | 0.42 | 0.18 | 5.29 | 0.87 | MapAlign | | ----------------------------------------------------------------------------------AEEYGYIVTDQKPLSLAAGVKLLEILAEHVHMSSGSFINISVVGPALTFRIRHNEQNLSLADVTQQAGLVKSELEAQTGLQILQTGVGQR--------------------------------------- |
5 | 2qt7B | 0.42 | 0.18 | 5.29 | 0.85 | CEthreader | | ----------------------------------------------------------------------------------AEEYGYIVTDQKPLSLAAGVKLLEILAEHVHMSSGSFINISVVGPALTFRIRHNEQNLSLADVTQQAGLVKSELEAQTGLQILQTGVGQRE-------------------------------------- |
6 | 2qt7B | 0.42 | 0.18 | 5.29 | 1.11 | MUSTER | | ----------------------------------------------------------------------------------AEEYGYIVTDQKPLSLAAGVKLLEILAEHVHMSSGSFINISVVGPALTFRIRHNEQNLSLADVTQQAGLVKSELEAQTGLQILQTGVGQRE-------------------------------------- |
7 | 2qt7B | 0.42 | 0.18 | 5.29 | 5.05 | HHsearch | | ----------------------------------------------------------------------------------AEEYGYIVTDQKPLSLAAGVKLLEILAEHVHMSSGSFINISVVGPALTFRIRHNEQNLSLADVTQQAGLVKSELEAQTGLQILQTGVGQRE-------------------------------------- |
8 | 2qt7B | 0.42 | 0.18 | 5.29 | 1.82 | FFAS-3D | | ----------------------------------------------------------------------------------AEEYGYIVTDQKPLSLAAGVKLLEILAEHVHMSSGSFINISVVGPALTFRIRHNEQNLSLADVTQQAGLVKSELEAQTGLQILQTGVGQRE-------------------------------------- |
9 | 4htiA | 1.00 | 0.42 | 11.68 | 1.18 | CNFpred | | ------------------------------------------------------------------------------------ARGYIVTDRDPLRPEEGRRLVEDVARLLQVPSSAFADVEVLGPAVTFKVSANVQNVTTEDVEKATVDNKDKLEETSGLKILQTGVGSK--------------------------------------- |
10 | 5ganA | 0.07 | 0.05 | 1.98 | 0.83 | DEthreader | | ------------------VIFRV--------------------EIPPLLYKW--GI-NLSEI---------------SRGQ-SAVLLETTLGMAFQYGLVIDLLLLG-ER----KAHPIRLYTRYLDRIYMLFHFEEDGEQDVNLGRAVFWEIQSRVPTSLTSIKNAFVSYNLLFSESEE-EIKKFDSRIRGILMSFRLGLNQRIPTLKII |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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