Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| SS Seq | CCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCSSCCCHHHHCCCCCCCCCCC DENRKPVSFRQRISTKNEEPVRSPERRDRKASANARKRKHSPSPPPPTPTESRKKSGKKGQASLYGKRRSQKEEDEQEDLTKDMEDPTPVPNIEEVVLPKNVNLKKDSENTPVKGGTVADLDEQDEETVTAGGKEDEDPAKGDQSRSVDLGEDNVTEQTNHIIIPSYASWFDYNCIHVIER |
1 | 2f03A | 0.08 | 0.08 | 3.09 | 0.49 | CEthreader | | EVAETYPINRRFAGFIDYKRVRWLPSPHGLLPQVLLVDAKASTEKNRDTLQRSQLPDAEFRNTSSGEVVTEAGVIPHLLQSANDGVLPAVTTSIFVHFYYRELKDVEGRYRELKSIYVLSLPHDPDTSFFGAGKHSPARGEVARIRVYFDRLKEACPWRLQELHYSADSEYTQPRWRDLND |
2 | 4lfeA | 0.07 | 0.07 | 2.79 | 0.58 | EigenThreader | | SMDKLKKIDQTIHAFYCEKAVISEKLNEAVLYSINAGGKLPAMDNDDYRRGQLTNHKKFDEATAILAGDSLFLDAFGMLAESSASGTFGTGQLLAYPFWAAARVAQLDENLLATFLEIGMIIGLAFQVRDDILDITAKMTYPHLLGLNESYQILDESLDQAEAILRKLSDQKILSLIERLR |
3 | 6kw5D | 0.45 | 0.08 | 2.42 | 0.43 | FFAS-3D | | ----------------------------------------------------------------------------------------------------------------------------------------------------EKALRFLAKQTHPVIIPSFASWFDISKIHEIEK |
4 | 4nl6A | 0.10 | 0.10 | 3.69 | 1.26 | SPARKS-K | | PEQEDSVLFRRGTGQSDDSDIWDDTASFKHALKNGDICETSGKPKTTPKRKPAKKNKSQKKNTAASLQQWKVGDKCSAIWSEDGCIYPATISIDFKRETCVVVYTGREEQNLSDLLSPICEVANNIEQNAQENENESQVSTDESENSRSPGNKSDNIKPKSAPWNSFLPPPPPMPGPRLGP |
5 | 6kw3H | 0.36 | 0.08 | 2.47 | 0.72 | CNFpred | | -------------------------------------------------------------------------------------------------------------------------------------------YEQEAQKLEEKALRFLAKQTHPVIIPSFASWFDISKIHEIEK |
6 | 6bq1A2 | 0.09 | 0.07 | 2.53 | 0.67 | DEthreader | | ----------IHKDPTYREVKDFARCGMILATH-ADGVEFMRAISSQRLATIRNVRGSQHKMKTLQWDNVAIEVTEAIKTPTGLFSQVQNTNDE-SAIKPYPGDERKKAYPMQSAKAPKVCR---------------------------------TA-CGVIECIPDCTSRDQ-LGMYTDE |
7 | 3iiyA | 0.08 | 0.08 | 3.06 | 0.71 | MapAlign | | FHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYMRFSTDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCILIAVCDDASIWRWDR------ |
8 | 6etxG | 0.13 | 0.12 | 4.24 | 0.74 | MUSTER | | QRYLRNKDFLLGVNFPLSFPNLCSCPLLKSLVFSSHCKAVSGYSDQVVHQRRSATSSLRRCLLTELPSFLCVASPRVTAVPLDSYCNDRSAEYERRVLKEGGSLAAKQCLLNGAPELAADWLRSQFFPEPAGGLWSIRPQNGWSFIRIPGKESLLKSQGHRVLI--YSQM-DL-----LEE |
9 | 5nr6A | 0.22 | 0.08 | 2.45 | 0.62 | HHsearch | | ------------------------------------------------------------------------------------------------------------------GSHMASMDQLDEI-IEQIQKEAINSNVVLNPRVPTQKTGELSE-EQKKIVADYISEVGLNNLNATEL |
10 | 5ho0A1 | 0.04 | 0.04 | 1.98 | 0.41 | CEthreader | | ------------DPQFTNVSVHDPSIVKDGDTYYIFGSHIEAAKSKDLMNWEKFTNGYTTPNNKLYGDLSKNLAGSFKWAGENDADSKGGFAVWAPDVFWNKDYVNEDGTKGAYMIYYSVSSTYIRSSGFTKEEAYDANSKINKKWTNTNIPKLIEQGKLKGVRADWFHNDGSYNNRDFPN |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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