Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300
| | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCCCCSSSSSSHSHCCCCCCCCCCCCCCCSSSCHHHHHHHHHCCCCCCSSSSSSCCCCCCSSSSSSSSCSCCCCSSSCCHHHHHHCCCCCCCSSSSSSSSCCCCCSSSSSSCCCCCCCCCCHHHHHHHHHCCCSSCSCCCSSSSSSCCSSSSSSSSSSCCCCCSSSSSCCSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSCCSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MFSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYKEPERQVQHEESTEGEADHSGYAGELGFRAFSGSGNRLDGKKKGVEPSPSPIKPGDIKRGIPNYEFKLGKITFIRNSRPLVKKVEEDEAGGRFVAFSGEGQSLRKKGRKP |
1 | 1zc1A | 0.49 | 0.30 | 8.61 | 0.83 | DEthreader | | --------FVNM--PQ-TFEEFFRCYPIAMMNDRIRKDDANFGGKIFLPPSALSKLSMLNIRYPMLFKLTANETGRVTHGGVLEFIAEEGRVYLPQWMMETLGIQPGSLLQISSTDVPLGQFVKLEPQSVDFLDISDPKAVLENVLRNFSTLTVDDVIEISYNGKTFKIKILEVKPSKSICVIETDLVTDFAPPVGYV------------------------------------------------------------------------------------------------------------- |
2 | 5e7pA | 0.15 | 0.13 | 4.30 | 1.71 | MapAlign | | -----------------LSHLRLTARLN-------TSALDSRRGVVRLHPEVLAAL---GIREWDAVALTG--T-RTTAAVAGVAGVPAGTALLDDVTLSNAGVRENAAVLVSPVTVYGARSVTVSGSRLATQSI--SPATLRMALL-GKVMTVGDTVSLLTW-TSELLTVTAVDPPGTVSVQP-NSVVSWGTPAPPPTSEQPVSFDDVKVTHPQAVKLDEWLRLSLDEPELLKTLGATPH--LGVLVSGPAGVGKATMVRAVCASRRVVELDGPEVGALQVDERLRSVTSAVAAVTESGGVLF--- |
3 | 1zc1A | 0.45 | 0.30 | 8.75 | 2.88 | SPARKS-K | | SGFSSFGGGNGFVNMPQTFEEFFRCYPIAMMNDRIRKDDANFGGKIFLPPSALSKLSMLNIRYPMLFKLTANETGRVTHGGVLEFIAEEGRVYLPQWMMETLGIQPGSLLQISSTDVPLGQFVKLEPQSVDFLDISDPKAVLENVLRNFSTLTVDDVIEISYNGKTFKIKILEVKPEKSICVIETDLVTDFAPPVGYVEPDYK-------------------------------------------------------------------------------------------------------- |
4 | 5g4fA1 | 0.12 | 0.10 | 3.57 | 1.48 | EigenThreader | | --------------MESNNGIILRVAEA--------NSTDPGMSRVRLDESSRRLL---DAEIGDVVEIEKVRKTVGRVYRARPEDENKGIVRIDSVMRNNCGASIGDKVKVRKVRTEIAKKVTLAPIIRKDQFGEGIEEYVQRALIRRPMLEQD-NISVPGLTTGLLFKVVKTLPSKVPVEIGEETKIEIREEPASEVLEEVSRISYEDIGGVPDRNGRKEILMIHTRNM----PLGMSEEEKNKFLEEMADYTYGFVLDKPIP--------------TEILEKMVVTEDDFKNALKSIEPS---- |
5 | 1zc1A | 0.47 | 0.28 | 8.25 | 1.76 | MapAlign | | -------------NMPQTFEEFFRCYPIAMMNDRIRKDDANFGGKIFLPPSALSKLSMLNIRYPMLFKLTANETGRVTHGGVLEFIAEEGRVYLPQWMMETLGIQPGSLLQISSTDVPLGQFVKLEPQSVDFLDISDPKAVLENVLRNFSTLTVDDVIEISYNGKTFKIKILEVKESKSICVIETDLVTDFAPPVVE-------------------------------------------------------------------------------------------------------------- |
6 | 6mdmB | 0.09 | 0.07 | 2.89 | 1.71 | MapAlign | | -----------------MAGRSMQAARC--P-----TDELSLSNCAVVSEKDY--------QSGQHVIVRT-SPNHKYIFTLRTHPVVPGSVAFSLPQRKWAGLSIGQEIEVALYSFQCIGTMTIEIDFPYDTDK--MAAEFIQQFN-NQAFSVGQQLVFSFNDKLFGLLVKDIEAIEVGLVVG-NSQVAFEKALNLIKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQLLSADVDIKELAVETKNFSGAEL--- |
7 | 1zc1A | 0.45 | 0.30 | 8.75 | 1.38 | CEthreader | | SGFSSFGGGNGFVNMPQTFEEFFRCYPIAMMNDRIRKDDANFGGKIFLPPSALSKLSMLNIRYPMLFKLTANETGRVTHGGVLEFIAEEGRVYLPQWMMETLGIQPGSLLQISSTDVPLGQFVKLEPQSVDFLDISDPKAVLENVLRNFSTLTVDDVIEISYNGKTFKIKILEVKPEKSICVIETDLVTDFAPPVGYVEPDYK-------------------------------------------------------------------------------------------------------- |
8 | 5e7pA | 0.06 | 0.06 | 2.35 | 1.25 | EigenThreader | | -------------TPLSHLRL--TARLN---TSALD---SRRGVVRLHPEVLAALG---IREWDAVALTG----TRTTAAVAG--VAGPGVLLDDVTLSNAGVRENA---AVLVSPVTVYRSVTVSG-SRLATQSISPATLRMALLGKVMTVGD--TVSL---LPRDLTVTAVDP--PGTVSVQPNSVVSWGTGTPEDPAPPPTGRH---TVSPQRSEQPVSFDDVKVTHPFIADVDALLPAGNEMRPPEVPENVDARLRAPEVCDRELGLSLPDATARRSLLEMLLRGVPSEDLDLGDIADHTPGF |
9 | 1zc1A | 0.47 | 0.31 | 9.02 | 2.08 | MUSTER | | MFSGSFGGGNGFVNMPQTFEEFFRCYPIAMMNDRIRKDDANFGGKIFLPPSALSKLSMLNIRYPMLFKLTANETGRVTHGGVLEFIAEEGRVYLPQWMMETLGIQPGSLLQISSTDVPLGQFVKLEPQSVDFLDISDPKAVLENVLRNFSTLTVDDVIEISYNGKTFKIKILEVKPEKSICVIETDLVTDFAPPVGYVEPDYK-------------------------------------------------------------------------------------------------------- |
10 | 1zc1A | 0.48 | 0.32 | 9.19 | 6.80 | HHsearch | | MFSFSSFGGNGFVNMPQTFEEFFRCYPIAMMNDRIRKDDANFGGKIFLPPSALSKLSMLNIRYPMLFKLTANETGRVTHGGVLEFIAEEGRVYLPQWMMETLGIQPGSLLQISSTDVPLGQFVKLEPQSVDFLDISDPKAVLENVLRNFSTLTVDDVIEISYNGKTFKIKILEVKPEKSICVIETDLVTDFAPPVGYVEPDYK-------------------------------------------------------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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