Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| SS Seq | CCCCCCCCSSSSSSSCCCCCCHHHHHHCCCCCCCCSSSSCCCSSSSSSCCSSSSSSSSSCCCCCSSSSSSSSSSSSSSSSCCCCCSSSSSSSSCCCCCCCCCCCSSSSCCSSSSSSCCCCCCCCCCCHHHHHCCCSSSSSSSSSSSCCCCCSSSSSSSSCHHHCCCCCSCCCSSSSCCCSSSSSHHHCCCSSSCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MAQENAAFSPGQEEPPRRRGRQRYVEKDGRCNVQQGLVFSSHAVVSLRDGRLCLMFRVGDLRSSHIVEASIRAKLIRSRQTLEGEFIPLHQTDLSVGFDTGDDRLFLVSPLVISHEIDAASPFWEASRRALERDDFEIVVILEGMVEATGMTCQARSSYLVDEVLWGHRFTSVLTLEDGFYEVDYASFHETFEVPTPSCSARELAEAAARLDAHLYWSIPSRLDEKVEEEGAGEGAGGEAGADKEQNGCLPPPESESKV |
1 | 3syaA | 0.68 | 0.52 | 14.73 | 1.00 | DEthreader | | -FTLVDNFMVGCM--K--------I--SQ--KRAETLVFSTHAVISMRDGKLCLMFRVGDLRNSHIVEASIRAKLIKSKQTS--EFIPLNQTDINVGYYTGDDRLFLVSPLIISHEINQQSPFWEISKAQLPKEELEIVVILEGMVEATGMTCQARSSYITSEILWGYRFTPVLTLEDGFYEVDYNSFHETYETSTPSLSAKELAELANRAESN--------------------------------------------- |
2 | 3jycA2 | 0.56 | 0.44 | 12.66 | 4.46 | SPARKS-K | | --NRFVKKNGQ----------CNVEFTNMDKKRAQTLLFSHNAVVAMRDGKLCLMWRVGNLRKSHIVEAHVRAQLIKPRITEEGEYIPLDQIDIDVGFDKGLDRIFLVSPITILHEINEDSPLFGISRQDLETDDFEIVVILEGMVEATAMTTQARSSYLASEILWGHRFEPVLFEEKNQYKVDYSHFHKTYEVPTPRCSAKDLVENKFLLSNS--------------------------------------------- |
3 | 3jycA | 0.56 | 0.44 | 12.67 | 1.34 | MapAlign | | ------VQSIVGCIIDSFMIGAIMAKMARPKKRAQTLLFSHNAVVAMRDGKLCLMWRVGNLRKSHIVEAHVRAQLIKPRITEEGEYIPLDQIDIDVGFDKGLDRIFLVSPITILHEINEDSPLFGISRQDLETDDFEIVVILEGMVEATAMTTQARSSYLASEILWGHRFEPVLFEEKNQYKVDYSHFHKTYEVPTPRCSAKDLVENKFL------------------------------------------------- |
4 | 3jycA | 0.54 | 0.44 | 12.81 | 1.08 | CEthreader | | AVFMVVVQSIVGCIIDSFMIGAIMAKMARPKKRAQTLLFSHNAVVAMRDGKLCLMWRVGNLRKSHIVEAHVRAQLIKPRITEEGEYIPLDQIDIDVGFDKGLDRIFLVSPITILHEINEDSPLFGISRQDLETDDFEIVVILEGMVEATAMTTQARSSYLASEILWGHRFEPVLFEEKNQYKVDYSHFHKTYEVPTPRCSAKDLVENKFLLSNS--------------------------------------------- |
5 | 3jycA2 | 0.56 | 0.44 | 12.66 | 2.74 | MUSTER | | --NRFVKKNGQCN----------VEFTNMDKKRAQTLLFSHNAVVAMRDGKLCLMWRVGNLRKSHIVEAHVRAQLIKPRITEEGEYIPLDQIDIDVGFDKGLDRIFLVSPITILHEINEDSPLFGISRQDLETDDFEIVVILEGMVEATAMTTQARSSYLASEILWGHRFEPVLFEEKNQYKVDYSHFHKTYEVPTPRCSAKDLVENKFLLSNS--------------------------------------------- |
6 | 2xkyI | 0.45 | 0.45 | 13.19 | 3.93 | HHsearch | | KLATMAVNGFGNVHTRDGHCNVQFINVGRG-GRNETLVFSHNAVIAMRDGKLCLMWRVGNLRKSHLVEAHVRAQLLKSRITSEGEYIPLDQIDINVGFDSGIDRIFLVSPITIVHEIDEDSPLYDLSKQDIDNADFEIVVILEGMVEATAMTTQCRSSYLANEILWGHRYEPVLFEEKHYYKVDYSRFHKTYEVPTPLCSARDLAEKKYILSNANSFCYENEVALTSKEEEEDSENGVDPIDQASVPLEPRPLRRESEI |
7 | 3syaA2 | 0.73 | 0.54 | 15.44 | 2.89 | FFAS-3D | | ---------------------QRYVRKDGKKKRAETLVFSTHAVISMRDGKLCLMFRVGDLRNSHIVEASIRAKLIKSKQTSEGEFIPLNQTDINVGYYTGDDRLFLVSPLIISHEINQQSPFWEISKAQLPKEELEIVVILEGMVEATGMTCQARSSYITSEILWGYRFTPVLTLEDGFYEVDYNSFHETYETSTPSLSAKELAELANRAESN--------------------------------------------- |
8 | 2xkyI | 0.39 | 0.36 | 10.61 | 1.57 | EigenThreader | | KVHTRQQCRSRFVKKDGHCNVQF-----INVGEKGQLVFSHNAVIAMRDGKLCLMWRVGNLRKSHLVEAHVRAQLLKSRITSEGEYIPLDQIDIVG--FDSGIDRIFLVSPTIVHEIDEDSPLYDLSKQDIDNADFEIVVILEGMVEATAMTTQCRYLANE--ILWGHRYEPVLFEEKHYYKVDYSRFHKTYEVPNPLCSARDLA------EKKYILSNANS-------FCYENEVALTSKEEEEDSENGVPESTSTDS |
9 | 1u4fA | 0.58 | 0.42 | 11.97 | 4.31 | CNFpred | | ----------------------NVQFINVGEKRNETLVFSHNAVIAMRDGKLCLMWRVGNLRKSHLVEAHVRAQLLKSRITSEGEYIPLDQIDINVGFDSGIDRIFLVSPITIVHEIDEDSPLYDLSKQDIDNADFEIVVILEGMVEATAMTTQCRSSYLANEILWGHRYEPVLFEEKHYYKVDYSRFHKTYEVPTPLCSARDLAEK---------------------------------------------------- |
10 | 6xisA | 0.69 | 0.51 | 14.50 | 1.00 | DEthreader | | --D-TTLVDLKWRFN------------KI-S----TLVFSTHAVISMRDGKLCLMFRVGDLRNSHIVEASIRAKLIKSKQTS--EFIPLNQTDINVGYYTGDDRLFLVSPLIISHEINQQSPFWEISKAQLPKEELEIVVILEGMVEATGMTCQARSSYITSEILWGYRFTPVLTLEDGFYEVDYNSFHETYETSTPSLSAKELAELANRAES---------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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