Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460
| | | | | | | | | | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCCSCCCCCCSCCCCSCCCCCCCHHCHHHHHHHCCCCSSSCCCCCCCCCCHHHHHHCCHHCHHHHHHHCCCCCCSSCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCSSSSCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCC MCENQLKTKADATAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQRLQEQRQQQSGEAEALARVYSSSISNGLSNLNNETSGTYANGHVIDLPKSEGYYNVDSGQPSPDQSGLDMTGIKQIKQEPIYDLTSVPNLFTYSSFNNGQLAPGITMTEIDRIAQNIIKSHLETCQYTMEELHQLAWQTHTYEEIKAYQSKSREALWQQCAIQITHAIQYVVEFAKRITGFMELCQNDQILLLKSGCLEVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKALGSDDLVNEAFDFAKNLCSLQLTEEEIALFSSAVLISPDRAWLIEPRKVQKLQEKIYFALQHVIQKNHLDDETLAKLIAKIPTITAVCNLHGEKLQVFKQSHPEIVNTLFPPLYKELFNPDCATGCK |
1 | 1n83A | 0.61 | 0.32 | 9.14 | 0.83 | DEthreader | | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FQGPAELEHLAQNISKSHLETCQYLREELQ-ITWQTFLQEEIENYQNKQREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVVFIRMCRAFDSQNNTVYFDGKYASPDVFKSLGCEDFISFVFEFGKSLCSMHLTEDEIALFSAFVLMSADRSWLQEKVKIEKLQQKIQLALQHVLQKNHREDGILTKLICKVSTLRALCGRHTEKLMAFKAIYPDIVRLHFPPLYKELF--------- |
2 | 4nqaB | 0.26 | 0.20 | 6.23 | 2.42 | SPARKS-K | | -KKGPAPKMLGHEL------CRVCGDKASGFHYNVLSCEGCKGFFRRSVVRGRRYACRGGGTCQMDAFMRRKCQQCRLRKCKEAGMREQCVLSEEQIRKKK----------------IRKQQQQESQS----------------------------------------QSQSPVGPQGSSSQGSGEGEGVQLT---------------------------AAQELMIQQLVAAQLQCNKRSFSDQPKVT---PWPLGADPQSRDARQQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNHETECITFLDFTYSKDDFHRAGLVEFINPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEALLSYTRIKRPDQLRFPRMLMKLVSLRTLSSVHSEQVFALRLQ-----DKKLPPLLSEIWD-------- |
3 | 3e00D | 0.28 | 0.20 | 6.19 | 1.37 | MapAlign | | ----------------MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRC-DLNCRIHKKSRNKCQYCRFQKCLAVGMSHNAIR-----------------------------------------------------------------------------------------------------FGRMPQAEKEKLLAEISSDIDQLNPESADLRALAKHLYDSYIKSFPLTKAKARAIPFVIYDMNSLMMGSKEVAIRIFQGCQFRSVEAVQEITEYAKSIPGFVNLDLNDQVTLLKYGVHEIIYTMLASLM-N-KDGVLIGQGFMTREFLKLRKPGDFMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALELQLKLNHPESSLFAKLLQKMTDLRQIVTEHVQLLQVIKKTE-TDM--SLHPLLQEIYKDLY----- |
4 | 4nqaB | 0.26 | 0.20 | 6.23 | 0.74 | CEthreader | | -------KKGPAPKMLGHELCRVCGDKASGFHYNVLSCEGCKGFFRRSVVRGRRYACRGGGTCQMDAFMRRKCQQCRLRKCKEAGMREQCVLSEEQIRKKKIRKQQ-----------------------------------------------------------------------------------QQESQSQSQSPVGPQGSSSQGSGEGEGVQLTAAQELMIQQLVAAQLQCNKRSFSDQPKVTPWPLGADPQSRDA---RQQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNHETECITFKDFTYSKDDFHRAGQVEFINPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEALLSYTRIKRPQDLRFPRMLMKLVSLRTLSSVHSEQVFALRLQD-----KKLPPLLSEIWD-------- |
5 | 4nqaB | 0.26 | 0.20 | 6.17 | 2.08 | MUSTER | | -------KKGPAPKMLGHELCRVCGDKASGFHYNVLSCEGCKGFFRRSVVRGRRYACRGGGTCQMDAFMRRKCQQCRLRKCKEAGMREQCVLSEEQIRKKKIRK---------------QQQQESQSQSQSPVGPQGSSSQGS--------------------------------------------------------------------GEGEGVQLTAAQELMIQQLVAAQLQCNKRSFSDQPKVTPWPLG---ADPQSRDARQQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNHETECITFLDFTYSKDDFHRAGLVEFINPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEALLSYTRIKRPDQLRFPRMLMKLVSLRTLSSVHSEQVFALRLQD-----KKLPPLLSEIWD-------- |
6 | 4nqaB | 0.26 | 0.20 | 6.12 | 2.87 | HHsearch | | -------KKGPAPKMLGHELCRVCGDKASGFHYNVLSCEGCKGFFRRSVVRGRRYACRGGGTCQMDAFMRRKCQQCRLRKCKEAGMREQCVLSEEQIRKKKIRKQQQQ----------ESQ-S----QS-----------Q------------------------------SPVGPQGSSSQG--------------SG-------------EGEGVQLTAAQELMIQQLVAAQLQCNKRSFSDQPKVTPWPLG---ADPQSRDARQQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNHETECITFKDFTYSKDDFHRAGLQEFINPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEALLSYTRIKRPDQLRFPRMLMKLVSLRTLSSVHSEQVFALRLQ----DK-KLPPLLSEIWD-------- |
7 | 4nqaB | 0.24 | 0.19 | 5.83 | 3.11 | FFAS-3D | | -------KKGPAPKMLGHELCRVCGDKASGFHYNVLSCEGCKGFFRRSVVRGGARACRGGGTCQMDAFMRRKCQQCRLRKCKEAGMREQCVLSEEQIRKKKIRKQ-------------------------------------------------------------------------------QQQESQSQSQSPVGPQGSSSQGSGEGEGVQLTAAQELMIQQLVAAQLQCNKRSFSDQPKVTPWPLGADPQSRDA-------RQQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNHETECITFKDFTYSKDDFHRAGLVEFINPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEALLSYTRIKRPQQLRFPRMLMKLVSLRTLSSVHSEQVFALRLQDKK-----LPPLLSEIWD-------- |
8 | 4nqaB | 0.21 | 0.16 | 5.01 | 1.70 | EigenThreader | | -----KKGPAPKMLGHE--LCRVCGDKASGYNVLSCEGCKGFFRRSVVRGGARRYACRGGGTCQMDAFMRRKCQQCRLRKCKEAGMRE-------------------------------------------------------QCVLSEEQIRKKKIRKQQQQESQSQSQSPVGPQGSSS------------------------QGSGEGEGVQLTAAQELMIQQLVAAQLQCNKRSFSDQP---------KVTP------WPLGAQQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNHETECITFLKFTYSKDDFHRALQVEFINPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEALLSYTRIKRQDQLRFPRMLMKLVSLRTLSSVHSEQVFALRLQ------DKKLPPLLSEIWD------- |
9 | 4nqaB | 0.26 | 0.20 | 6.12 | 1.88 | CNFpred | | -------KKGPAPKMLGHELCRVCGDKASGFHYNVLSCEGCKGFFRRSVVRARRYACRGGGTCQMDAFMRRKCQQCRLRKCKEAGMREQCVLSEEQIRKKKIRKQQQQESQSQSQSPVGPQGSS-----------------------------------------SQGSGEGEGVQL------------------------------------------TAAQELMIQQLVAAQLQCNKRSFSDQPKVTP---WPLGADPQSRDARQQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNHETECITFLDFTYSKDDFHRAGQVEFINPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEALLSYTRIKRQDQLRFPRMLMKLVSLRTLSSVHSEQVFALRLQ-----DKKLPPLLSEIWD-------- |
10 | 1k4wA | 0.95 | 0.49 | 13.73 | 0.83 | DEthreader | | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-M-SEIDRIAQNIIKSHLETCQYTEELHQLAWQ-THTYEEIKAYQSKSREALWQQCAIQITHAIQYVVEFAKRITGFMELCQNDQILLLKSGCLEVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKALGSDDLVNEAFDFAKNLCSLQLTEEEIALFSSAVLISPDRAWLLEPRKVQKLQEKIYFALQHVIQKNHLDDETLAKLIAKIPTITAVCNLHGEKLQVFKQSHPDIVNTLFPPLYKELFN-------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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