Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360
| | | | | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHCCSSCCCCCCCSSCCCCCCHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCSCCCCCCCCCCCC MAAISTSIPVISQPQFTAMNEPQCFYNESIAFFYNRSGKHLATEWNTVSKLVMGLGITVCIFIMLANLLVMVAIYVNRRFHFPIYYLMANLAAADFFAGLAYFYLMFNTGPNTRRLTVSTWLLRQGLIDTSLTASVANLLAIAIERHITVFRMQLHTRMSNRRVVVVIVVIWTMAIVMGAIPSVGWNCICDIENCSNMAPLYSDSYLVFWAIFNLVTFVVMVVLYAHIFGYVRQRTMRMSRHSSGPRRNRDTMMSLLKTVVIVLGAFIICWTPGLVLLLLDVCCPQCDVLAYEKFFLLLAEFNSAMNPIIYSYRDKEMSATFRQILCCQRSENPTGPTEGSDRSASSLNHTILAGVHSNDHSVV |
1 | 6me6A | 0.18 | 0.16 | 5.10 | 1.33 | DEthreader | | -------DD-LKLAKEAQAAAEQLKTTRNAYIQKYLGDGAR--PS-WVAPALSAVLIVTTAVDVVGNLLVILSVLRNRKLRNAGNLFLVSLALANLVVAFYPYPLILVAIYDGWAFGEEHCKASAFVMGLSVIGSVWNITAIAIDRYLYICHSMAYHIYRRWHTPLHICLIWLLTVVALLPN-FFVGSLEYDPRSCTFIQTASTQYTAAVVIHFLLPIAVVSFCYLRIWVLVLQARMKKYTCTIYNEVCLKSDLRSFLTMFVVFVIFAICFAPLNCIGLAVANMAPQIPEGLFVTSYLLAYFNSCLNPIVYGLLDQNFRREYKRILLA------------------------LW--N------- |
2 | 2g87A | 0.14 | 0.13 | 4.49 | 1.95 | SPARKS-K | | --MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAE----------PWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQL----VFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPLGDDEASTTVSKTETSQVAPA----------- |
3 | 1u19A | 0.15 | 0.14 | 4.62 | 0.58 | MapAlign | | -------------MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLGWSRYIPEGMQCSCGIDNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQ----ESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNP---------------LGDDEASTTVSKTETS- |
4 | 2ziyA | 0.15 | 0.14 | 4.73 | 0.33 | CEthreader | | ------------------DLRDNETWWYNPSIIVHPHWREFDQVPDAVYYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGLMTISCFLKKWIFGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMASKKMSHRRAFIMIIFVWLWSVLWAIGPIFGWGAYTLEGVLCNCSFDYISNILCMFILGFFGPILIIFFCYFNIVMSVSNHEKEMAAMARKAQAGANAEMRLAKISIVIVSQFLLSWSPYAVVALLAQFGPLWVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFPWVLTCCQFDDKETEDDKDAETEIPAGESSDAAPSADA |
5 | 2g87A | 0.16 | 0.15 | 4.86 | 1.66 | MUSTER | | M--NGTEGPNFYVPFSNKTGVVRS----------PFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEA----AAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPLGDDEASTTVSKTETSQVAPA----------- |
6 | 6kp6A | 0.24 | 0.19 | 5.82 | 1.35 | HHsearch | | ---------------------------------------------TVEMVFIATVTGSLSLVTVVGNILVMLSIKVNRQLQTVNNYFLFSLACADLIIGAFSMNLYTYTIKGYWPLGAVVCDLWLALDYVVSNASVMNLLIISFDRYFCVTKPLTYPRRTTKMAALMIAAAWVLSFVLWAPAILFWQFVVPDNQCFAQFLSNPAVTFGTAIAAFYLPVVIMTVLYIHIYLASRSRVHGIDCSPCKKSQMAARERKVTRTIFAILLAFILTWTPYNVMVLVNTFCQSCIPDTVWSIGYWLCYVNSTIRPACYALCNAEFKKTFRHLLLCQ----------------------------------- |
7 | 4z34A1 | 0.99 | 0.79 | 22.01 | 3.30 | FFAS-3D | | -------------------NEPQCFYNESIAFFYNRSGKHLATEWNTVSKLVMGLGITVCIFIMLANLLVMVAIYVNRRFHFPIYYLMANLAAADFFAGLAYFYLMFNTGPNTRRLTVSTWLLRQGLIDTSLTASVANLLAIAIERHITVFRMQLHTRMSNRRVVVVIVVIWTMAIVMGAIPSVGWNCICDIENCSNMAPLYSDSYLVFWAIFNLVTFVVMVVLYA------------------HYLRNRDTMMSLLKTVVIVLGAFIICWTPGLVLLLLDVCCPQCDVLAYEKFFLLLAEFNSAMNPIIYSYRDKEMSATFRQIL-------------------------------------- |
8 | 2ks9A | 0.16 | 0.14 | 4.77 | 0.95 | EigenThreader | | -----------DNVLPVDSDLSPNISTNT-------SEPNQFVQPAWQIVLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNFTYAVHNEWYY---GLFYCKFHNFFPIAAVFASIYSMTAVAFDRYMAIIHPLQ-PRLSATATKVVICVIWVLALLLAFPQGYYSTTETMPSRVVCMIEWPEHYHICVTVLIYFLPLLVIGYAYTVVGITL----------WASEIPGDSAKRKVVKMMIVVVCTFAICWLPFHIFFLLPYINPDLYLQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHAFRCCPFISAGDYEGLEMKSTRYLQTQGSVYKVSRLETTI |
9 | 4z34A | 0.95 | 0.80 | 22.50 | 1.71 | CNFpred | | -------------------NEPQCFYNESIAFFYNRSGKHLATEWNTVSKLVMGLGITVCIFIMLANLLVMVAIYVNRRFHFPIYYLMANLAAADFFAGLAYFYLMFNTGPNTRRLTVSTWLLRQGLIDTSLTASVANLLAIAIERHITVFRMQLHTRMSNRRVVVVIVVIWTMAIVMGAIPSVGWNCICDIENCSNMAPLYSDSYLVFWAIFNLVTFVVMVVLYAHIFGYVADLEDNWETLND-YLRNRDTMMSLLKTVVIVLGAFIICWTPGLVLLLLDVCCPQCDVLAYEKFFLLLAEFNSAMNPIIYSYRDKEMSATFRQILG------------------------------------- |
10 | 2ks9A | 0.17 | 0.14 | 4.69 | 1.17 | DEthreader | | ---------------------------STNTSEPN---QFV--QPAWQIVLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAANTVVNFTYAVHNEWYYGLFYCKFHNFFPIAAVFASIYSMTAVAFDRYMAIIHPL-QPRLSATATKVVICVIWVLALLLAFPQGYYSTTETMRVVCMIEWPEHEKVYHIVTVLIYFLPLLVIGYAYTVVGITLWASEI-GD-SSDRYHEQVSAKRKVVKMMIVVVCTFAICWLPFHIFFLLPYINPLYFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHAFRCCPF-I---SAGDYE---------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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