Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Download alignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500
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| SS Seq | CCCCCCCHHHHHHHHHHHCCSSSSSSSCCCCHHHHHHHHHHCHHHHHHHHCCSSSSSSCCCCHHHHHHHHHCCCCCCCSSSSSCCCCSSSSSSCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHSSSSSCCCCCSSSSSSCCCCHHHHHHHHHHHHCCCCCCCSSSSCCCCCSSCCCCHHHCCHHHHCCCCCSSSSSSSCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSCCCCCCCCCCCCCCCCCCCCCC MLWFQGAIPAAIATAKRSGAVFVVFVAGDDEQSTQMAASWEDDKVTEASSNSFVAIKIDTKSEACLQFSQIYPVVCVPSSFFIGDSGIPLEVIAGSVSADELVTRIHKVRQMHLLKSETSVANGSQSESSVSTPSASFEPNNTCENSQSRNAELCEIPPTSDTKSDTATGGESAGHATSSQEPSGCSDQRPAEDLNIRVERLTKKLEERREEKRKEEEQREIKKEIERRKTGKEMLDYKRKQEEELTKRMLEERNREKAEDRAARERIKQQIALDRAERAARFAKTKEEVEAAKAAALLAKQAEMEVKRESYARERSTVARIQFRLPDGSSFTNQFPSDAPLEEARQFAAQTVGNTYGNFSLATMFPRREFTKEDYKKKLLDLELAPSASVVLLPAGRPTASIVHSSSGDIWTLLGTVLYPFLAIWRLISNFLFSNPPPTQTSVRVTSSEPPNPASSSKSEKREPVRKRVLEKRGDDFKKEGKIYRLRTQDDGEDENNTWNGNSTQQM |
1 | 2dzkA | 0.89 | 0.18 | 5.04 | 1.18 | FFAS-3D | | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SGSSGRDRSTIARIQFRLPDGSSFTNQFPSDAPLEEARQFAAQTVGNTYGNFSLATMFPRREFTREDYKRRLLDLELAPSASVVLLPAGRPATSIVHSSSGD-------------------------------------------------------------------------------------------------- |
2 | 2lstA | 0.18 | 0.04 | 1.35 | 1.03 | CNFpred | | -------YPEALALAQAHGRMVMVYFHSECPYCQQMNTFLSDPGVSRLLEARFVVASVSVDTPEGQELARRYRVPGTPTFVFLVPKWEEVGRLFGSRPRAEFLKELRQVCVKGGACGEGHHHHHH----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
3 | 2dzkA | 0.84 | 0.18 | 5.10 | 1.53 | HHsearch | | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSSGSSGRDRSTIARIQFRLPDGSSFTNQFPSDAPLEEARQFAAQTVGNTYGNFSLATMFPRREFTREDYKRRLLDLELAPSASVVLLPAGRPATSIVHSSSGDIL----MID----------------------------------------------------------------------------------------- |
4 | 3f8uA | 0.11 | 0.10 | 3.63 | 0.66 | CEthreader | | LELTDDNFESRISDTGSAGLMLVEFFAPWCGHAKRLAPEY--EAAATRLKGIVPLAKVDC--TANTNTCNKYGVSGYPTLKIF-RDGEEAGAYDGPRTADGIVSHLKKQAG------------------PASVPLRTEEEFKKFISDKDASIVGFFDDSFSEAHSEFLKAASNLRDNYRFAHTNVESLVNEYDDNGEGIILFRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENIFGICPHMTEDNKDLIQGKDLLIAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAGHKLNFAVASRKTFSHELSDFGLESTAGEIPVVAIRTAKGEKFVMQEEFSRDGKALERFLQDYFDGNLKRYLKSEPIPE-----------------SNDGPVKVVVAENFDEIVNNENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATANDVPSPYEVRGFPTIYFSPANKKLNPKKYEGGRELSDFISYLQREATNPPVIQEE-- |
5 | 5xf7A | 0.08 | 0.06 | 2.21 | 0.85 | EigenThreader | | ILLLVLTP-AGLTQMLNQTRFLMVLFHNSSKQSRNLAEELGKAVEIMGKKNGIGFGKVITIEKELQQEF---GITKAPELKLFEGNRSEPISCKGVVESAALVVWLRRQISQKALFNSSEQVAEFVISRPDLEEEVAELFYDVIKDFPELTITIGNVIGRFHVTLDINDSTNKQELNRVIKQHLTDFVINTENKDLISELH-------------------------------------------------------------------------------------------------------------------IMSHMLLFVS----KS-----SESYGIIIQHYKLASKEFQNKILFILVDADEPRNGRVFKYFRV---TEVDIPSVQILNLSSDARYKMPSDDITYESLKKFGRSFLS------------KNATKHQSSEEIPKYWDQGLVDKEKPWSKKCKMLFPLLEELGRKYQNHKIDVTANDIQLMYLDRYPAVLYKGE |
6 | 2dlxA | 0.13 | 0.03 | 1.15 | 1.08 | FFAS-3D | | -LMHKGSFETAKECGQMQNKWLMINIQNVFACQCLNRDVWSNEAVKNIIREHFIFWQVYHDSEEGQRYIQFYKLGDFPYVSILDRTGQKLVEW-HQLDVSSFLDQVTGFLGEHGQLDGLSSSSGPSSG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
7 | 6yvuB | 0.09 | 0.08 | 2.95 | 0.99 | SPARKS-K | | SNSKLASTLEKISSSNKDLEDEKMKFQESLKKVDEIKAQRKEIKDRISSCSSKEKTLVLERRELEGTRVSLEERTKNLVSKMEKAEKTLKSTKHSISEAENMLEELRGQQTEHETEIKDLTQLLEKERSILDDIKLSLKDKT--KNISAEIIRHEKELEPW------------------------------DLQLQEKESQIQLAESELSLLEETQAKLKKNVETLEEKILAKKTHKQELQDLILDLKKKLNSLKDERSQGEKNFTSAHLKLKEMQKVLNAHRQRAMEARSSLSKAQNKSKVLTALSRLQKSGRING----FHGRLGDLGVIDDSVDTVECAQHCIDYLRKNKLGY-ARFILLDRLRQFNLQPISTPENVPRL-----------------FDLVKPKNPKFSNAFYSVLR---------DTLVAQNNNVAYGKKRVDGKLIDISGTMSGNHVAKGLMKLKVDDYTPEEVDKIERELSERENNFRVASDTVHEMEEELK |
8 | 5gu7C | 0.12 | 0.06 | 1.96 | 1.00 | CNFpred | | -------IDEILNNA---DVALVNFYADWCRFSQMLHPIFE--EASDVIKNQVVFARVDCD--QHSDIAQRYRISKYPTLKLFRNGMMMKREYRGQRSVKALADYIRQQKSDPIQEI-------------------------------------------------------------------------------------------------------------------RDLAEITTLDRSKRNIIGYFEQ-------DSDNYRVFERVANILHDDCAFLSAFGDVSKPERYS----------------------GDNIIYKPPGHSAPDMVYLGMTNFDVTYNWIQDKCV---PLVREIT------------FENGEELTEEGLPFLILFHMK-------------DTESLEIFQNEVARQL---------------------------------------------------------------------------------- |
9 | 1vw1A | 0.06 | 0.03 | 1.49 | 0.67 | DEthreader | | -----ELYRARNLHASDSVYTRRPDLMLSTLSLSNELSAALSTYYIRQAKAAAYLLIDTTRIAEAI----------------------------------------------------------IVYT-VYQYSGNTTAISPDVSIQP---NALE---S------------------VSTDNALTLHHNENGAQNTLFARQLVARAIILLFYPARWLKSTDLLIARGDAARVNLRHNLSGQPLYLPI--Y--AT--PA-DP--KA--L--LS-AA-VATSQG-QGTY-GLLAGETLMLSLAQMEDAHLKRDKRALEV-ERTVSLALAQIDA---------KQI-SV-TLP-ALLGPYQDVQAILSYEALAVSGQFQLDFNDFLPFEIDTLTLSFP--NA--S------MP-EKGKQATMLKT--DI-IL------------------------------------------------------------------------------- |
10 | 3apoA | 0.08 | 0.06 | 2.51 | 0.89 | MapAlign | | VTELTGNFVNAIETAFAAGVGWLITFCSKGEDC--LSQTR--LRLSGMLDGLVNVGWVDCD--AQDSLC------KSLTTAYFPPGATLVLFLNSL-DAKEIYMEIIHNLPDFELLSANQLEDRLAHHRWLVFFHFGNDPELKKLKTLLKNEHIQVVRFDCSSAPGICSDLYVFQPSLAVFKGQGTKEYEIHHGKKILYDILAFAKESVNSHVTTLGPQNFPASDKEPWLVDFFAPWSPPSRALLPELRKASTLLYGQLKVGTLDCTIHEGLCNMYNIQAYPTTVVFNQSSIHEYEGHHSAEQILEFIEDLRNPSVDEVWMVDFYSVQRYPEIRFYFLPQASIDLPQTFNEKVLQGTHWVVDFYAPWSGPSQNFAPEFEARKVRAGKVDCPSVKLYQY---ERAKKSIWEEQINSRDAKTIAALIYGKL------------------------------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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